Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr5.920 Acer truncatum HOM05D008942 ORTHO05D009202 9.3e-64 246.9 142 100.0
Duzib138G1053 Durio zibethinus HOM05D008942 ORTHO05D009202 6.8e-14 81.3 112 46.4
Thecc.01G321000 Theobroma cacao HOM05D008942 ORTHO05D009202 1.5e-13 80.1 142 47.9
QL12p033984 Quercus lobata HOM05D008942 ORTHO05D009202 1.7e-12 76.6 143 41.3
CiPaw.07G122200 Carya illinoinensis HOM05D008942 ORTHO05D009202 7.0e-11 71.2 148 40.5
QL12p033964 Quercus lobata HOM05D008942 ORTHO05D009202 7.0e-11 71.2 137 41.6
Potri.014G115800 Populus trichocarpa HOM05D008942 ORTHO05D009202 1.2e-10 70.5 113 45.1
QL12p034826 Quercus lobata HOM05D008942 ORTHO05D009202 5.9e-10 68.2 138 47.1
Lj5g0018092 Lotus japonicus HOM05D008942 ORTHO05D009202 1.0e-09 67.4 149 34.2
Sabra02G0164800 Salix brachista HOM05D008942 ORTHO05D009202 1.0e-09 67.4 111 40.5
Sabra14G0085900 Salix brachista HOM05D008942 ORTHO05D009202 1.0e-09 67.4 112 40.2
Gohir.D08G142200 Gossypium hirsutum HOM05D008942 ORTHO05D009202 1.7e-09 66.6 145 39.3
Cpa.g.sc1096.1 Carica papaya HOM05D008942 ORTHO05D009202 2.9e-09 65.9 150 36.0
Manes.01G232300 Manihot esculenta HOM05D008942 ORTHO05D009202 3.8e-09 65.5 110 41.8
Cfa004867 Carpinus fangiana HOM05D008942 ORTHO05D009202 6.6e-09 64.7 72 50.0
CiPaw.08G085100 Carya illinoinensis HOM05D008942 ORTHO05D009202 8.6e-09 64.3 147 36.7
Gorai.004G146500 Gossypium raimondii HOM05D008942 ORTHO05D009202 1.9e-08 63.2 145 38.6
Gorai.007G120200 Gossypium raimondii HOM05D008942 ORTHO05D009202 2.5e-08 62.8 115 38.3
Potri.002G190700 Populus trichocarpa HOM05D008942 ORTHO05D009202 2.5e-08 62.8 138 35.5
Gohir.D11G112000 Gossypium hirsutum HOM05D008942 ORTHO05D009202 3.3e-08 62.4 114 38.6
Haze_05106 Corylus avellana HOM05D008942 ORTHO05D009202 4.3e-08 62.0 109 37.6
Gohir.A11G107000 Gossypium hirsutum HOM05D008942 ORTHO05D009202 4.3e-08 62.0 114 36.8
COL.COLO4_23172 Corchorus olitorius HOM05D008942 ORTHO05D009202 5.6e-08 61.6 168 35.1
Manes.01G232200 Manihot esculenta HOM05D008942 ORTHO05D009202 5.6e-08 61.6 110 40.9
CiPaw.07G122100 Carya illinoinensis HOM05D008942 ORTHO05D009202 2.8e-07 59.3 143 35.0
Ciclev10022668m.g Citrus clementina HOM05D008942 ORTHO05D009202 2.8e-07 59.3 121 36.4
Haze_05107 Corylus avellana HOM05D008942 ORTHO05D009202 4.7e-07 58.5 64 45.3
Cfa004866 Carpinus fangiana HOM05D008942 ORTHO05D009202 6.1e-07 58.2 108 35.2
MD17G1279600 Malus domestica HOM05D008942 ORTHO05D009202 6.1e-07 58.2 85 44.7
TPR.G3019 Trifolium pratense HOM05D008942 ORTHO05D009202 8.0e-07 57.8 142 35.2
CiPaw.08G152800 Carya illinoinensis HOM05D009264 ORTHO05D009202 1.4e-06 57.0 109 36.7
Nn4g25438 Nelumbo nucifera HOM05D008942 ORTHO05D009202 1.8e-06 56.6 69 43.5
CiPaw.08G085000 Carya illinoinensis HOM05D008942 ORTHO05D009202 2.3e-06 56.2 154 34.4


User provided reference genes

Program Settings