Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr5.867 Acer truncatum HOM05D006141 ORTHO05D007670 8.5e-45 183.3 95 100.0
Atru.chr5.866 Acer truncatum HOM05D006141 ORTHO05D007670 8.2e-32 140.2 90 88.9
Duzib138G1179 Durio zibethinus HOM05D006141 ORTHO05D007670 3.1e-15 85.1 86 60.5
Thecc.01G324800 Theobroma cacao HOM05D006141 ORTHO05D007670 3.1e-15 85.1 86 61.6
Haze_05144 Corylus avellana HOM05D006141 ORTHO05D007670 9.1e-15 83.6 89 59.6
Cfa004908 Carpinus fangiana HOM05D006141 ORTHO05D007670 2.7e-14 82.0 90 58.9
QL12p034897 Quercus lobata HOM05D006141 ORTHO05D007670 7.7e-14 80.5 89 60.7
Potri.014G112900 Populus trichocarpa HOM05D006141 ORTHO05D007670 1.7e-13 79.3 89 57.3
Gohir.A08G036900 Gossypium hirsutum HOM05D006141 ORTHO05D007670 7.2e-12 73.9 88 54.5
Gohir.D08G047500 Gossypium hirsutum HOM05D006141 ORTHO05D007670 7.2e-12 73.9 88 54.5
Gorai.004G046700 Gossypium raimondii HOM05D006141 ORTHO05D007670 7.2e-12 73.9 88 54.5
Manes.01G234600 Manihot esculenta HOM05D006141 ORTHO05D007670 9.5e-12 73.6 90 55.6
Sabra14G0083000 Salix brachista HOM05D006141 ORTHO05D007670 3.6e-11 71.6 89 52.8
Ca_09244_v3 Cicer arietinum L. HOM05D006141 ORTHO05D007670 8.0e-11 70.5 89 52.8
Glyma.03G224200 Glycine max HOM05D006141 ORTHO05D007670 1.8e-10 69.3 88 52.3
CiPaw.08G082900 Carya illinoinensis HOM05D006141 ORTHO05D007670 2.3e-10 68.9 88 52.3
MD17G1284800 Malus domestica HOM05D006141 ORTHO05D007670 2.3e-10 68.9 88 51.1
CANSAT25G1526 Cannabis sativa HOM05D006141 ORTHO05D007670 3.0e-10 68.6 89 48.3
Phvul.001G218100 Phaseolus vulgaris HOM05D006141 ORTHO05D007670 4.0e-10 68.2 88 50.0
VMungo1383G2247 Vigna mungo HOM05D006141 ORTHO05D007670 4.0e-10 68.2 88 50.0
TPR.G2465 Trifolium pratense HOM05D006141 ORTHO05D007670 6.8e-10 67.4 88 48.9
GSVIVG01028253001 Vitis vinifera HOM05D006141 ORTHO05D007670 2.0e-09 65.9 89 50.6
PGR042G1406 Punica granatum HOM05D006141 ORTHO05D007670 3.4e-09 65.1 86 46.5
Glyma.19G221200 Glycine max HOM05D006141 ORTHO05D007670 4.4e-09 64.7 88 50.0
Lj1g0014608 Lotus japonicus HOM05D006141 ORTHO05D007670 5.7e-09 64.3 88 45.5
Psat3g016880 Pisum sativum HOM05D006141 ORTHO05D007670 9.8e-09 63.5 89 48.3
Ciclev10022224m.g Citrus clementina HOM05D006141 ORTHO05D007670 1.3e-08 63.2 89 46.1
Prupe.3G003000 Prunus persica HOM05D006141 ORTHO05D007670 1.3e-08 63.2 88 48.9
TWI59G0338 Tripterygium wilfordii HOM05D006141 ORTHO05D007670 1.3e-08 63.2 91 50.5
COL.COLO4_23134 Corchorus olitorius HOM05D006141 ORTHO05D007670 1.7e-08 62.8 86 47.7
Rhsim01G0000200 Rhododendron simsii HOM05D006141 ORTHO05D007670 2.2e-08 62.4 85 52.9
FAN19G0972 Fragaria x ananassa HOM05D006141 ORTHO05D007670 2.8e-08 62.0 88 47.7
FvH4_1g26260 Fragaria vesca HOM05D006141 ORTHO05D007670 6.3e-08 60.8 85 49.4
Medtr7g110620 Medicago truncatula HOM05D006141 ORTHO05D007670 8.3e-08 60.5 89 44.9
ClCG01G007160 Citrullus lanatus HOM05D006141 ORTHO05D007670 1.1e-07 60.1 88 43.2
Cpa.g.sc57.9 Carica papaya HOM05D006141 ORTHO05D007670 1.4e-07 59.7 94 45.7
FAN26G1012 Fragaria x ananassa HOM05D006141 ORTHO05D007670 1.8e-07 59.3 88 45.5
CARHR172480 Cardamine hirsuta HOM05D006141 ORTHO05D007670 2.4e-07 58.9 88 45.5
FAN23G3136 Fragaria x ananassa HOM05D006141 ORTHO05D007670 2.4e-07 58.9 88 42.0
Lalb_Chr18g0046401 Lupinus albus HOM05D006141 ORTHO05D007670 2.4e-07 58.9 86 43.0
FAN28G2755 Fragaria x ananassa HOM05D006141 ORTHO05D007670 3.1e-07 58.5 88 42.0
THA.LOC104817433 Tarenaya hassleriana HOM05D006141 ORTHO05D007670 3.1e-07 58.5 86 50.0
TAR362G0148 Trochodendron aralioides HOM05D006141 ORTHO05D007670 3.1e-07 58.5 92 51.1
Nn4g25355 Nelumbo nucifera HOM05D006141 ORTHO05D007670 2.0e-06 55.8 95 44.2
AL5G44810 Arabidopsis lyrata HOM05D006141 ORTHO05D007670 4.5e-06 54.7 93 44.1
Carub.0005s2889 Capsella rubella HOM05D006141 ORTHO05D007670 4.5e-06 54.7 91 45.1
Ciclev10030010m.g Citrus clementina HOM05D006141 ORTHO05D007670 4.5e-06 54.7 85 50.6
MELO3C005194.2 Cucumis melo HOM05D006141 ORTHO05D007670 7.8e-06 53.9 89 42.7


User provided reference genes

Program Settings