Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr5.865 Acer truncatum HOM05D005773 ORTHO05D006930 1.8e-114 416.0 219 100.0
Thecc.01G324900 Theobroma cacao HOM05D005773 ORTHO05D006930 5.5e-39 165.2 281 42.0
TAR633G1051 Trochodendron aralioides HOM05D005773 ORTHO05D006930 7.4e-36 154.8 242 43.0
Gorai.007G116800 Gossypium raimondii HOM05D005773 ORTHO05D006930 9.7e-36 154.5 251 43.8
Gohir.D11G109200 Gossypium hirsutum HOM05D005773 ORTHO05D006930 2.8e-35 152.9 251 43.4
Duzib138G1928 Durio zibethinus HOM05D005773 ORTHO05D006930 6.3e-35 151.8 251 43.4
Ciclev10020833m.g Citrus clementina HOM05D005773 ORTHO05D006930 1.4e-34 150.6 241 46.9
Duzib133G1161 Durio zibethinus HOM05D005773 ORTHO05D006930 5.3e-34 148.7 249 42.6
MBI19_g30285_MAGBIO Magnolia biondii HOM05D005773 ORTHO05D006930 1.2e-33 147.5 237 44.7
CSS0030034 Camellia sinensis var. sinensis HOM05D005773 ORTHO05D006930 3.5e-33 146.0 268 39.6
Manes.03G212700 Manihot esculenta HOM05D005773 ORTHO05D006930 3.5e-33 146.0 221 42.1
MSTRG.14719 Avicennia marina HOM05D005773 ORTHO05D006930 1.0e-32 144.4 240 40.8
Gohir.A11G104400 Gossypium hirsutum HOM05D005773 ORTHO05D006930 2.9e-32 142.9 251 42.2
MD13G1156700 Malus domestica HOM05D005773 ORTHO05D006930 4.2e-31 139.0 245 41.6
SalBow7G4520 Salvia bowleyana HOM05D005773 ORTHO05D006930 5.5e-31 138.7 216 42.1
Aqoxy2G02493 Aquilegia oxysepala HOM05D005773 ORTHO05D006930 1.2e-30 137.5 236 39.8
CiPaw.01G128000 Carya illinoinensis HOM05D005773 ORTHO05D006930 3.6e-30 136.0 242 41.7
Sabra10G0002700 Salix brachista HOM05D005773 ORTHO05D006930 3.6e-30 136.0 231 40.3
Potri.010G003200 Populus trichocarpa HOM05D005773 ORTHO05D006930 4.7e-30 135.6 243 41.2
SalBow7G0248 Salvia bowleyana HOM05D005773 ORTHO05D006930 4.7e-30 135.6 216 41.7
Oeu012285.1 Olea europaea HOM05D005773 ORTHO05D006930 1.2e-28 131.0 257 39.3
Dinv24720 Davidia involucrata HOM05D005773 ORTHO05D006930 1.5e-28 130.6 239 41.8
MSTRG.13210 Avicennia marina HOM05D005773 ORTHO05D006930 2.0e-28 130.2 246 39.4
QL06p014502 Quercus lobata HOM05D005773 ORTHO05D006930 4.4e-28 129.0 251 39.8
Cfa015740 Carpinus fangiana HOM05D005773 ORTHO05D006930 5.7e-28 128.6 236 41.1
Haze_00756 Corylus avellana HOM05D005773 ORTHO05D006930 3.7e-27 125.9 235 43.0
GSVIVG01017699001 Vitis vinifera HOM05D005773 ORTHO05D006930 3.7e-27 125.9 173 45.1
Migut.H01460 Erythranthe guttata HOM05D005773 ORTHO05D006930 4.8e-27 125.6 239 36.0
COL.COLO4_23133 Corchorus olitorius HOM05D005773 ORTHO05D006930 4.1e-26 122.5 265 37.0
Nitab4.5_0000978g0060 Nicotiana tabacum HOM05D005773 ORTHO05D006930 5.3e-26 122.1 291 35.1
Cc03_g00040 Coffea canephora HOM05D005773 ORTHO05D006930 5.9e-25 118.6 251 35.9
Medtr4g124080 Medicago truncatula HOM05D005773 ORTHO05D006930 2.9e-24 116.3 173 41.6
Nn3g21943 Nelumbo nucifera HOM05D005773 ORTHO05D006930 2.9e-24 116.3 239 38.5
TPR.G12556 Trifolium pratense HOM05D005773 ORTHO05D006930 2.9e-24 116.3 179 43.6
Potri.002G187300 Populus trichocarpa HOM05D005773 ORTHO05D006930 8.5e-24 114.8 240 36.7
Nitab4.5_0012375g0020 Nicotiana tabacum HOM05D005773 ORTHO05D006930 1.1e-23 114.4 280 34.3
Lj4g0014107 Lotus japonicus HOM05D005773 ORTHO05D006930 1.5e-23 114.0 222 39.2
Nn4g25353 Nelumbo nucifera HOM05D005773 ORTHO05D006930 1.5e-23 114.0 233 36.9
Hund12260 Selenicereus undatus HOM05D005773 ORTHO05D006930 1.5e-23 114.0 234 38.0
Manes.01G234700 Manihot esculenta HOM05D005773 ORTHO05D006930 3.2e-23 112.8 236 36.0
SGA_v2.0_scaffold109G31080 Striga asiatica HOM05D005773 ORTHO05D006930 9.4e-23 111.3 214 36.0
VMungo1215G1523 Vigna mungo HOM05D005773 ORTHO05D006930 2.1e-22 110.2 171 42.7
CANSAT78G1256 Cannabis sativa HOM05D005773 ORTHO05D006930 2.7e-22 109.8 212 37.3
Hma1.2p1_1449F.1_g284070 Hydrangea macrophylla HOM05D005773 ORTHO05D006930 2.7e-22 109.8 229 34.1
CDE02G3050 Ceratophyllum demersum HOM05D005773 ORTHO05D006930 3.6e-22 109.4 218 32.6
PGR004G1534 Punica granatum HOM05D005773 ORTHO05D006930 3.6e-22 109.4 161 41.6
EL10Ac3g06235 Beta vulgaris HOM05D005773 ORTHO05D006930 4.7e-22 109.0 226 35.0
AUR62023652 Chenopodium quinoa HOM05D005773 ORTHO05D006930 4.7e-22 109.0 156 38.5
Prupe.1G103600 Prunus persica HOM05D005773 ORTHO05D006930 6.1e-22 108.6 250 37.6
CAN.G484.97 Capsicum annuum HOM05D005773 ORTHO05D006930 8.0e-22 108.2 271 35.4
Actinidia18514 Actinidia chinensis HOM05D005773 ORTHO05D006930 1.0e-21 107.8 258 35.7
FAN07G0153 Fragaria x ananassa HOM05D005773 ORTHO05D006930 1.0e-21 107.8 172 39.0
Nn3g21941 Nelumbo nucifera HOM05D005773 ORTHO05D006930 1.0e-21 107.8 237 35.4
Aqoxy2G02494 Aquilegia oxysepala HOM05D005773 ORTHO05D006930 1.8e-21 107.1 108 49.1
Lalb_Chr13g0299011 Lupinus albus HOM05D005773 ORTHO05D006930 1.8e-21 107.1 244 35.2
HanXRQChr05g0148961 Helianthus annuus HOM05D005773 ORTHO05D006930 2.3e-21 106.7 219 36.5
TWI53G0973 Tripterygium wilfordii HOM05D005773 ORTHO05D006930 3.0e-21 106.3 224 38.4
Glyma.17G041600 Glycine max HOM05D005773 ORTHO05D006930 5.2e-21 105.5 108 52.8
PSO210G3229 Papaver somniferum HOM05D005773 ORTHO05D006930 5.2e-21 105.5 244 36.1
Phvul.003G123000 Phaseolus vulgaris HOM05D005773 ORTHO05D006930 5.2e-21 105.5 175 39.4
Cpa.g.sc146.13 Carica papaya HOM05D005773 ORTHO05D006930 6.8e-21 105.1 215 33.5
RcHm_v2.0_Chr4g0427881 Rosa chinensis HOM05D005773 ORTHO05D006930 8.8e-21 104.8 230 37.4
Glyma.13G118300 Glycine max HOM05D005773 ORTHO05D006930 1.5e-20 104.0 168 38.7
Ciclev10005574m.g Citrus clementina HOM05D005773 ORTHO05D006930 2.0e-20 103.6 207 35.7
ECA246G2714 Erigeron canadensis HOM05D005773 ORTHO05D006930 2.0e-20 103.6 128 43.8
Sc25g0002150 Simmondsia chinensis HOM05D005773 ORTHO05D006930 2.0e-20 103.6 252 32.5
FvH4_4g21650 Fragaria vesca HOM05D005773 ORTHO05D006930 2.6e-20 103.2 172 36.6
ClCG05G006890 Citrullus lanatus HOM05D005773 ORTHO05D006930 3.4e-20 102.8 110 49.1
Carub.0001s3743 Capsella rubella HOM05D005773 ORTHO05D006930 4.4e-20 102.4 239 34.7
arahy.Tifrunner.gnm1.ann1.RWG9MN Arachis hypogaea HOM05D005773 ORTHO05D006930 5.7e-20 102.1 179 36.3
Ah.07g203560 Amaranthus hybridus HOM05D005773 ORTHO05D006930 7.5e-20 101.7 223 35.4
FAN17G1594 Fragaria x ananassa HOM05D005773 ORTHO05D006930 7.5e-20 101.7 168 39.3
MD16G1134300 Malus domestica HOM05D005773 ORTHO05D006930 7.5e-20 101.7 245 34.3
unitig_26.g9353 Utricularia gibba HOM05D005773 ORTHO05D006930 7.5e-20 101.7 206 37.4
arahy.Tifrunner.gnm1.ann1.9W2SDJ Arachis hypogaea HOM05D005773 ORTHO05D006930 9.8e-20 101.3 181 35.9
arahy.Tifrunner.gnm1.ann1.F7JGYB Arachis hypogaea HOM05D005773 ORTHO05D006930 1.3e-19 100.9 180 35.6
Solyc12g098850.2 Solanum lycopersicum HOM05D005773 ORTHO05D006930 1.3e-19 100.9 294 33.0
Sopen12g033600 Solanum pennellii HOM05D005773 ORTHO05D006930 1.3e-19 100.9 294 33.0
BcaB04g17451 Brassica carinata HOM05D005773 ORTHO05D006930 1.7e-19 100.5 237 35.0
CDE09G0185 Ceratophyllum demersum HOM05D005773 ORTHO05D006930 1.7e-19 100.5 218 33.5
ATR0796G282 Amborella trichopoda HOM05D005773 ORTHO05D006930 2.2e-19 100.1 131 41.2
Sp1g35250 Schrenkiella parvula HOM05D005773 ORTHO05D006930 2.2e-19 100.1 245 33.5
Eucgr.H04131 Eucalyptus grandis HOM05D005773 ORTHO05D006930 3.7e-19 99.4 224 35.7
PGSC0003DMG400004596 Solanum tuberosum HOM05D005773 ORTHO05D006930 3.7e-19 99.4 293 33.4
MELO3C006755.2 Cucumis melo HOM05D005773 ORTHO05D006930 8.3e-19 98.2 104 50.0
Zm00001eb417470 Zea mays HOM05D005773 ORTHO05D006930 8.3e-19 98.2 199 37.7
A08p04910 Brassica napus HOM05D005773 ORTHO05D006930 1.1e-18 97.8 231 33.8
BraA08t32517Z Brassica rapa HOM05D005773 ORTHO05D006930 1.1e-18 97.8 231 33.8
Sed0009476 Sechium edule HOM05D005773 ORTHO05D006930 1.1e-18 97.8 101 47.5
Lsat_1_v5_gn_6_118320 Lactuca sativa HOM05D005773 ORTHO05D006930 1.4e-18 97.4 212 36.8
C08p05240 Brassica napus HOM05D005773 ORTHO05D006930 1.8e-18 97.1 231 33.3
AL1G54900 Arabidopsis lyrata HOM05D005773 ORTHO05D006930 2.4e-18 96.7 237 32.1
Ca_21368_v3 Cicer arietinum L. HOM05D005773 ORTHO05D006930 2.4e-18 96.7 222 35.1
arahy.Tifrunner.gnm1.ann1.AWA2M3 Arachis hypogaea HOM05D000254 ORTHO05D000165 3.1e-18 96.3 181 35.4
Sed0002380 Sechium edule HOM05D005773 ORTHO05D006930 3.1e-18 96.3 95 50.5
Thhalv10011577m.g Eutrema salsugineum HOM05D005773 ORTHO05D006930 4.1e-18 95.9 247 32.4
Peaxi162Scf00323g00817 Petunia axillaris HOM05D005773 ORTHO05D006930 5.4e-18 95.5 282 33.0
AT1G48300 Arabidopsis thaliana HOM05D005773 ORTHO05D006930 7.0e-18 95.1 234 31.6
Os05g0137300 Oryza sativa ssp. japonica HOM05D005773 ORTHO05D006930 7.0e-18 95.1 182 36.8
THA.LOC104802618 Tarenaya hassleriana HOM05D005773 ORTHO05D006930 7.0e-18 95.1 193 34.2
Rhsim04G0249100 Rhododendron simsii HOM05D005773 ORTHO05D006930 9.1e-18 94.7 277 32.1
arahy.Tifrunner.gnm1.ann1.YBC12K Arachis hypogaea HOM05D005773 ORTHO05D006930 1.6e-17 94.0 238 31.9
Aa31LG10G5470 Aethionema arabicum HOM05D005773 ORTHO05D006930 2.0e-17 93.6 238 31.1
BolC8t47338H Brassica oleracea HOM05D005773 ORTHO05D006930 5.9e-17 92.0 231 32.5
CARHR037910 Cardamine hirsuta HOM05D005773 ORTHO05D006930 5.9e-17 92.0 233 31.3
Atru.chr4.3177 Acer truncatum HOM05D005773 ORTHO05D006930 1.3e-16 90.9 172 39.0
AUR62002540 Chenopodium quinoa HOM05D005773 ORTHO05D006930 2.2e-16 90.1 229 34.9
Psat0s1206g0160 Pisum sativum HOM05D005773 ORTHO05D006930 1.1e-15 87.8 231 32.0
CsaV3_3G015560 Cucumis sativus L. HOM05D005773 ORTHO05D006930 1.4e-13 80.9 209 34.0
Actinidia01071 Actinidia chinensis HOM05D005773 ORTHO05D006930 1.8e-13 80.5 204 32.4
BcaC07g37153 Brassica carinata HOM05D005773 ORTHO05D006930 7.5e-12 75.1 213 31.9
arahy.Tifrunner.gnm1.ann1.EN1MLR Arachis hypogaea HOM05D005773 ORTHO05D006930 9.8e-12 74.7 196 33.7
SEGI_38196 Sequoiadendron giganteum HOM05D005773 ORTHO05D006930 2.2e-11 73.6 90 41.1
HPP92_012765 Vanilla planifolia HOM05D005773 ORTHO05D006930 1.2e-09 67.8 176 34.7
TAR625G0572 Trochodendron aralioides HOM05D005773 ORTHO05D006930 2.7e-09 66.6 81 46.9
SEGI_24223 Sequoiadendron giganteum HOM05D005773 ORTHO05D006930 7.8e-09 65.1 166 31.3
Cpa.g.sc57.12 Carica papaya HOM05D005773 ORTHO05D006930 3.8e-08 62.8 44 61.4
CARHR041400 Cardamine hirsuta HOM05D005773 ORTHO05D006930 1.5e-07 60.8 48 52.1
Hma1.2p1_1067F.1_g253800 Hydrangea macrophylla HOM05D005773 ORTHO05D006930 3.3e-07 59.7 68 44.1
Pp3c14_16980 Physcomitrium patens HOM05D029403 ORTHO05D006930 5.6e-07 58.9 88 37.5
Mapoly0035s0141 Marchantia polymorpha HOM05D005773 ORTHO05D006930 9.5e-07 58.2 88 38.6
SMO356G0556 Selaginella moellendorffii HOM05D005773 ORTHO05D006930 1.2e-06 57.8 161 29.8
Pp3c17_20330 Physcomitrium patens HOM05D029403 ORTHO05D006930 2.1e-06 57.0 58 44.8


User provided reference genes

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