Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr5.861 Acer truncatum HOM05D006977 ORTHO05D008738 6.0e-109 397.5 201 100.0
Cfa004914 Carpinus fangiana HOM05D006977 ORTHO05D008738 1.9e-70 269.6 201 69.2
Ciclev10022352m.g Citrus clementina HOM05D006977 ORTHO05D008738 7.2e-70 267.7 202 69.8
Haze_05149 Corylus avellana HOM05D006977 ORTHO05D008738 3.6e-69 265.4 201 68.2
Dinv12080 Davidia involucrata HOM05D006977 ORTHO05D008738 4.7e-61 238.4 201 62.7
QL05p057365 Quercus lobata HOM05D006977 ORTHO05D008738 1.4e-60 236.9 182 67.6
Manes.05G008900 Manihot esculenta HOM05D006977 ORTHO05D008738 1.5e-59 233.4 203 61.6
CiPaw.08G082500 Carya illinoinensis HOM05D006977 ORTHO05D008738 3.4e-59 232.3 191 62.3
TWI81G0461 Tripterygium wilfordii HOM05D006977 ORTHO05D008738 2.8e-58 229.2 172 64.5
Thecc.01G325400 Theobroma cacao HOM05D006977 ORTHO05D008738 1.1e-57 227.3 178 67.4
Sabra14G0082500 Salix brachista HOM05D006977 ORTHO05D008738 2.4e-57 226.1 170 65.9
Potri.014G112200 Populus trichocarpa HOM05D006977 ORTHO05D008738 8.6e-55 217.6 175 65.1
Duzib133G0680 Durio zibethinus HOM05D006977 ORTHO05D008738 8.0e-53 211.1 179 62.6
Cpa.g.sc112.76 Carica papaya HOM05D006977 ORTHO05D008738 1.4e-52 210.3 178 61.8
Cpa.g.sc57.16 Carica papaya HOM05D006977 ORTHO05D008738 1.4e-52 210.3 178 60.7
CSS0050251 Camellia sinensis var. sinensis HOM05D006977 ORTHO05D008738 5.2e-52 208.4 168 66.7
GSVIVG01028248001 Vitis vinifera HOM05D006977 ORTHO05D008738 5.2e-52 208.4 173 63.6
PGR042G1466 Punica granatum HOM05D006977 ORTHO05D008738 7.5e-51 204.5 166 63.9
Gohir.D11G109500 Gossypium hirsutum HOM05D006977 ORTHO05D008738 9.8e-51 204.1 179 61.5
Gorai.007G117100 Gossypium raimondii HOM05D006977 ORTHO05D008738 9.8e-51 204.1 179 61.5
CiPaw.07G125600 Carya illinoinensis HOM05D006977 ORTHO05D008738 3.7e-50 202.2 202 57.4
MBI19_g30288_MAGBIO Magnolia biondii HOM05D006977 ORTHO05D008738 3.7e-50 202.2 185 61.6
Ca_17328_v3 Cicer arietinum L. HOM05D006977 ORTHO05D008738 6.4e-50 201.4 182 59.3
Gohir.A11G104700 Gossypium hirsutum HOM05D006977 ORTHO05D008738 6.4e-50 201.4 179 60.9
Lj5g0006261 Lotus japonicus HOM05D006977 ORTHO05D008738 1.9e-49 199.9 173 60.7
TAR362G0624 Trochodendron aralioides HOM05D006977 ORTHO05D008738 2.4e-49 199.5 177 60.5
Eucgr.A01003 Eucalyptus grandis HOM05D006977 ORTHO05D008738 4.1e-49 198.7 172 59.9
Prupe.3G002600 Prunus persica HOM05D006977 ORTHO05D008738 4.1e-49 198.7 170 62.9
MD09G1290400 Malus domestica HOM05D006977 ORTHO05D008738 5.4e-49 198.4 183 56.8
Glyma.10G137900 Glycine max HOM05D006977 ORTHO05D008738 7.0e-49 198.0 183 58.5
Glyma.04G053700 Glycine max HOM05D006977 ORTHO05D008738 1.6e-48 196.8 176 59.1
Nn4g24845 Nelumbo nucifera HOM05D006977 ORTHO05D008738 2.7e-48 196.1 179 58.1
Actinidia25872 Actinidia chinensis HOM05D006977 ORTHO05D008738 3.5e-48 195.7 177 59.9
Cc04_g01560 Coffea canephora HOM05D006977 ORTHO05D008738 3.5e-48 195.7 151 68.2
Psat7g015240 Pisum sativum HOM05D006977 ORTHO05D008738 6.0e-48 194.9 185 58.9
Duzib268G1723 Durio zibethinus HOM05D006977 ORTHO05D008738 1.3e-47 193.7 184 58.7
Phvul.L002843 Phaseolus vulgaris HOM05D006977 ORTHO05D008738 1.7e-47 193.4 184 54.9
Lalb_Chr11g0071671 Lupinus albus HOM05D006977 ORTHO05D008738 2.3e-47 193.0 155 63.9
COL.COLO4_23128 Corchorus olitorius HOM05D006977 ORTHO05D008738 3.0e-47 192.6 183 58.5
RcHm_v2.0_Chr3g0485771 Rosa chinensis HOM05D006977 ORTHO05D008738 3.9e-47 192.2 196 57.1
VMungo0720G2811 Vigna mungo HOM05D006977 ORTHO05D008738 4.3e-46 188.7 173 59.0
Medtr8g103265 Medicago truncatula HOM05D006977 ORTHO05D008738 7.3e-46 188.0 151 64.9
PSO357G0421 Papaver somniferum HOM05D006977 ORTHO05D008738 7.3e-46 188.0 157 61.8
MSTRG.6995 Avicennia marina HOM05D006977 ORTHO05D008738 1.2e-45 187.2 167 58.7
arahy.Tifrunner.gnm1.ann1.KP3I1I Arachis hypogaea HOM05D006977 ORTHO05D008738 2.1e-45 186.4 160 60.6
THA.LOC104799825 Tarenaya hassleriana HOM05D006977 ORTHO05D008738 2.1e-45 186.4 178 56.7
Hma1.2p1_0484F.1_g162990 Hydrangea macrophylla HOM05D006977 ORTHO05D008738 2.8e-45 186.0 192 55.2
FAN23G2129 Fragaria x ananassa HOM05D006977 ORTHO05D008738 6.2e-45 184.9 207 52.2
PSO170G4516 Papaver somniferum HOM05D006977 ORTHO05D008738 8.0e-45 184.5 150 61.3
Aa31LG5G1570 Aethionema arabicum HOM05D006977 ORTHO05D008738 1.1e-44 184.1 168 56.0
ECA236G2063 Erigeron canadensis HOM05D006977 ORTHO05D008738 1.1e-44 184.1 164 57.9
FAN19G2776 Fragaria x ananassa HOM05D006977 ORTHO05D008738 1.1e-44 184.1 206 51.9
arahy.Tifrunner.gnm1.ann1.PT1J72 Arachis hypogaea HOM05D006977 ORTHO05D008738 3.1e-44 182.6 150 62.0
Duzib268G1378 Durio zibethinus HOM05D006977 ORTHO05D008738 3.1e-44 182.6 144 63.2
FAN26G0658 Fragaria x ananassa HOM05D006977 ORTHO05D008738 2.0e-43 179.9 209 51.2
HanXRQChr15g0493961 Helianthus annuus HOM05D006977 ORTHO05D008738 9.8e-43 177.6 168 56.0
Lsat_1_v5_gn_7_107761 Lactuca sativa HOM05D006977 ORTHO05D008738 9.8e-43 177.6 163 59.5
Migut.M01655 Erythranthe guttata HOM05D006977 ORTHO05D008738 2.9e-42 176.0 179 54.7
FAN28G2841 Fragaria x ananassa HOM05D006977 ORTHO05D008738 3.7e-42 175.6 206 51.5
Rhsim01G0293500 Rhododendron simsii HOM05D006977 ORTHO05D008738 4.9e-42 175.3 154 60.4
ClCG01G007180 Citrullus lanatus HOM05D006977 ORTHO05D008738 6.4e-42 174.9 178 54.5
AL6G51510 Arabidopsis lyrata HOM05D006977 ORTHO05D008738 1.1e-41 174.1 169 52.7
Sed0019401 Sechium edule HOM05D006977 ORTHO05D008738 2.4e-41 172.9 151 58.9
CARHR249760 Cardamine hirsuta HOM05D006977 ORTHO05D008738 4.1e-41 172.2 169 51.5
HPP92_012764 Vanilla planifolia HOM05D006977 ORTHO05D008738 4.1e-41 172.2 177 53.1
Sp3g31270 Schrenkiella parvula HOM05D006977 ORTHO05D008738 5.4e-41 171.8 169 50.3
SpUn0082_0020 Schrenkiella parvula HOM05D006977 ORTHO05D008738 5.4e-41 171.8 169 50.3
DCAR_012297 Daucus carota HOM05D006977 ORTHO05D008738 9.2e-41 171.0 182 54.4
AT4G01790 Arabidopsis thaliana HOM05D006977 ORTHO05D008738 1.2e-40 170.6 169 52.7
Carub.0006s3543 Capsella rubella HOM05D006977 ORTHO05D008738 2.1e-40 169.9 167 52.1
Duzib268G1823 Durio zibethinus HOM05D006977 ORTHO05D008738 2.1e-40 169.9 144 61.8
Aqoxy5G02822 Aquilegia oxysepala HOM05D006977 ORTHO05D008738 4.6e-40 168.7 148 59.5
Sc02g0004000 Simmondsia chinensis HOM05D006977 ORTHO05D008738 4.6e-40 168.7 168 53.0
MELO3C005192.2 Cucumis melo HOM05D006977 ORTHO05D008738 7.8e-40 167.9 173 54.3
Thhalv10029024m.g Eutrema salsugineum HOM05D006977 ORTHO05D008738 1.3e-39 167.2 160 51.9
BcaB01g02378 Brassica carinata HOM05D006977 ORTHO05D008738 1.7e-39 166.8 156 51.3
ATR0796G043 Amborella trichopoda HOM05D006977 ORTHO05D008738 2.3e-39 166.4 187 47.6
BcaC01g06803 Brassica carinata HOM05D006977 ORTHO05D008738 3.9e-39 165.6 156 51.3
BolC3t16121H Brassica oleracea HOM05D006977 ORTHO05D008738 3.9e-39 165.6 156 51.3
CsaV3_5G018620 Cucumis sativus L. HOM05D006977 ORTHO05D008738 6.6e-39 164.9 151 57.6
FvH4_1g26230 Fragaria vesca HOM05D006977 ORTHO05D008738 6.6e-39 164.9 169 55.0
C03p38480 Brassica napus HOM05D006977 ORTHO05D008738 3.3e-38 162.5 156 50.6
vmacro15094 Vaccinium macrocarpon HOM05D006977 ORTHO05D008738 3.3e-38 162.5 140 63.6
A03p31490 Brassica napus HOM05D006977 ORTHO05D008738 4.3e-38 162.2 156 51.3
BraA03t12329Z Brassica rapa HOM05D006977 ORTHO05D008738 4.3e-38 162.2 156 51.3
Oeu031543.1 Olea europaea HOM05D006977 ORTHO05D008738 9.5e-38 161.0 184 53.8
AUR62020194 Chenopodium quinoa HOM05D006977 ORTHO05D008738 1.1e-36 157.5 157 52.2
AUR62007556 Chenopodium quinoa HOM05D006977 ORTHO05D008738 1.4e-36 157.1 150 54.7
PGSC0003DMG400001120 Solanum tuberosum HOM05D006977 ORTHO05D008738 2.3e-36 156.4 173 53.2
Hund02455 Selenicereus undatus HOM05D006977 ORTHO05D008738 4.0e-36 155.6 163 50.9
Zm00001eb328690 Zea mays HOM05D006977 ORTHO05D008738 6.8e-36 154.8 159 50.3
Solyc01g080830.3 Solanum lycopersicum HOM05D006977 ORTHO05D008738 2.0e-35 153.3 173 52.6
Lj1A7G42 Lonicera japonica HOM05D006977 ORTHO05D008738 3.4e-35 152.5 131 63.4
SalBow5G4120 Salvia bowleyana HOM05D006977 ORTHO05D008738 3.4e-35 152.5 137 58.4
Sopen01g030650 Solanum pennellii HOM05D006977 ORTHO05D008738 6.4e-34 148.3 146 58.2
TPR.G23504 Trifolium pratense HOM05D006977 ORTHO05D008738 1.4e-33 147.1 125 61.6
CANSAT25G0488 Cannabis sativa HOM05D006977 ORTHO05D008738 1.6e-32 143.7 137 59.9
Peaxi162Scf00309g00082 Petunia axillaris HOM05D006977 ORTHO05D008738 1.0e-31 141.0 119 62.2
Os07g0636400 Oryza sativa ssp. japonica HOM05D006977 ORTHO05D008738 3.0e-31 139.4 156 45.5
EL10Ac6g15579 Beta vulgaris HOM05D006977 ORTHO05D008738 3.9e-31 139.0 174 45.4
CAN.G100.60 Capsicum annuum HOM05D006977 ORTHO05D008738 3.9e-31 139.0 119 61.3
SGA_v2.0_scaffold204G41642 Striga asiatica HOM05D006977 ORTHO05D008738 1.5e-30 137.1 153 53.6
unitig_8.g4039 Utricularia gibba HOM05D006977 ORTHO05D008738 6.4e-26 121.7 165 44.2
Nitab4.5_0003092g0050 Nicotiana tabacum HOM05D006977 ORTHO05D008738 8.4e-26 121.3 110 57.3
Sp6g01640 Schrenkiella parvula HOM05D006977 ORTHO05D008738 5.4e-25 118.6 116 50.0
Nitab4.5_0000222g0410 Nicotiana tabacum HOM05D006977 ORTHO05D008738 7.8e-24 114.8 106 56.6
MD17G1285100 Malus domestica HOM05D006977 ORTHO05D008738 7.3e-22 108.2 97 58.8
CDE02G1393 Ceratophyllum demersum HOM05D006977 ORTHO05D008738 3.2e-17 92.8 74 59.5
Duzib138G1646 Durio zibethinus HOM05D006977 ORTHO05D008738 3.3e-14 82.8 88 51.1
Mapoly0147s0029 Marchantia polymorpha HOM05D006977 ORTHO05D008738 2.0e-11 73.6 127 34.6
Pp3c20_22530 Physcomitrium patens HOM05D006977 ORTHO05D008738 8.4e-10 68.2 139 33.1
TWI81G0948 Tripterygium wilfordii HOM05D006977 ORTHO05D008738 1.9e-09 67.0 43 65.1
CDE04G2744 Ceratophyllum demersum HOM05D006977 ORTHO05D008738 5.4e-09 65.5 51 60.8


User provided reference genes

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