Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr5.830 Acer truncatum HOM05D006057 ORTHO05D007224 2.1e-65 252.3 135 100.0
Potri.014G110300 Populus trichocarpa HOM05D006057 ORTHO05D007224 2.7e-44 182.2 126 78.6
Duzib138G1502 Durio zibethinus HOM05D006057 ORTHO05D007224 1.1e-42 176.8 136 72.1
Manes.05G006500 Manihot esculenta HOM05D006057 ORTHO05D007224 1.1e-42 176.8 135 70.4
Eucgr.A00985 Eucalyptus grandis HOM05D006057 ORTHO05D007224 1.1e-40 170.2 132 66.7
QL09p037524 Quercus lobata HOM05D006057 ORTHO05D007224 2.3e-40 169.1 134 68.7
TWI14G0531 Tripterygium wilfordii HOM05D006057 ORTHO05D007224 2.6e-39 165.6 126 71.4
Ciclev10023548m.g Citrus clementina HOM05D006057 ORTHO05D007224 4.4e-39 164.9 119 73.1
COL.COLO4_23092 Corchorus olitorius HOM05D006057 ORTHO05D007224 5.8e-39 164.5 131 68.7
Sp6g39640 Schrenkiella parvula HOM05D006057 ORTHO05D007224 5.8e-39 164.5 124 70.2
PGR042G0310 Punica granatum HOM05D006057 ORTHO05D007224 1.7e-38 162.9 133 63.2
Cpa.g.sc57.50 Carica papaya HOM05D006057 ORTHO05D007224 3.8e-38 161.8 135 68.1
BraA02t04741Z Brassica rapa HOM05D006057 ORTHO05D007224 3.2e-37 158.7 123 68.3
TWI59G0504 Tripterygium wilfordii HOM05D006057 ORTHO05D007224 4.1e-37 158.3 135 68.1
BcaB05g21854 Brassica carinata HOM05D006057 ORTHO05D007224 5.4e-37 157.9 124 67.7
BcaC03g13034 Brassica carinata HOM05D006057 ORTHO05D007224 9.2e-37 157.1 124 66.9
BcaC03g13036 Brassica carinata HOM05D006057 ORTHO05D007224 9.2e-37 157.1 124 66.9
CSS0031729 Camellia sinensis var. sinensis HOM05D006057 ORTHO05D007224 9.2e-37 157.1 135 63.7
Aa31LG1G21980 Aethionema arabicum HOM05D006057 ORTHO05D007224 1.6e-36 156.4 126 67.5
TAR633G2394 Trochodendron aralioides HOM05D006057 ORTHO05D007224 1.6e-36 156.4 135 64.4
GSVIVG01028268001 Vitis vinifera HOM05D006057 ORTHO05D007224 2.7e-36 155.6 119 70.6
Sabra02G0131200 Salix brachista HOM05D006057 ORTHO05D007224 3.5e-36 155.2 125 68.8
Gohir.D12G122500 Gossypium hirsutum HOM05D006057 ORTHO05D007224 4.6e-36 154.8 131 66.4
Hma1.2p1_0350F.1_g132530 Hydrangea macrophylla HOM05D006057 ORTHO05D007224 6.0e-36 154.5 134 65.7
Thhalv10015298m.g Eutrema salsugineum HOM05D006057 ORTHO05D007224 1.7e-35 152.9 122 66.4
Gorai.008G133300 Gossypium raimondii HOM05D006057 ORTHO05D007224 3.9e-35 151.8 131 65.6
SHI19776 Sapria himalayana HOM05D006057 ORTHO05D007224 3.9e-35 151.8 114 69.3
RcHm_v2.0_Chr2g0148291 Rosa chinensis HOM05D006057 ORTHO05D007224 5.1e-35 151.4 136 60.3
BcaC06g32027 Brassica carinata HOM05D006057 ORTHO05D007224 1.1e-34 150.2 127 66.9
BcaNung04734 Brassica carinata HOM05D006057 ORTHO05D007224 1.1e-34 150.2 127 66.9
BolC9t60103H Brassica oleracea HOM05D006057 ORTHO05D007224 1.1e-34 150.2 127 66.9
CARHR210270 Cardamine hirsuta HOM05D006057 ORTHO05D007224 1.9e-34 149.4 125 67.2
AL6G12340 Arabidopsis lyrata HOM05D006057 ORTHO05D007224 2.5e-34 149.1 127 64.6
BcaC06g32028 Brassica carinata HOM05D006057 ORTHO05D007224 2.5e-34 149.1 127 66.9
BraA10t45317Z Brassica rapa HOM05D006057 ORTHO05D007224 2.5e-34 149.1 126 66.7
Carub.0006s0184 Capsella rubella HOM05D006057 ORTHO05D007224 3.3e-34 148.7 127 66.1
C02p00760 Brassica napus HOM05D006057 ORTHO05D007224 4.3e-34 148.3 124 65.3
BolC2t06074H Brassica oleracea HOM05D006057 ORTHO05D007224 4.3e-34 148.3 124 65.3
arahy.Tifrunner.gnm1.ann1.78VVNS Arachis hypogaea HOM05D006057 ORTHO05D007224 5.6e-34 147.9 121 67.8
C09p73700 Brassica napus HOM05D006057 ORTHO05D007224 5.6e-34 147.9 127 66.1
BolC9t60100H Brassica oleracea HOM05D006057 ORTHO05D007224 5.6e-34 147.9 127 66.1
AT5G03050 Arabidopsis thaliana HOM05D006057 ORTHO05D007224 9.6e-34 147.1 127 64.6
Medtr1g085355 Medicago truncatula HOM05D006057 ORTHO05D007224 9.6e-34 147.1 121 66.9
arahy.Tifrunner.gnm1.ann1.TF3SPP Arachis hypogaea HOM05D006057 ORTHO05D007224 1.2e-33 146.7 119 68.1
Haze_05170 Corylus avellana HOM05D006057 ORTHO05D007224 1.6e-33 146.4 119 67.2
Medtr4g118050 Medicago truncatula HOM05D006057 ORTHO05D007224 1.6e-33 146.4 123 67.5
TPR.G3097 Trifolium pratense HOM05D006057 ORTHO05D007224 1.6e-33 146.4 121 66.9
Gohir.A12G118700 Gossypium hirsutum HOM05D006057 ORTHO05D007224 2.1e-33 146.0 131 64.1
Nn4g25242 Nelumbo nucifera HOM05D006057 ORTHO05D007224 3.6e-33 145.2 130 61.5
vmacro02351 Vaccinium macrocarpon HOM05D006057 ORTHO05D007224 3.6e-33 145.2 135 60.0
Prupe.3G028700 Prunus persica HOM05D006057 ORTHO05D007224 6.2e-33 144.4 135 59.3
Gohir.A07G132650 Gossypium hirsutum HOM05D006057 ORTHO05D007224 1.1e-32 143.7 106 68.9
Medtr1g085440 Medicago truncatula HOM05D006057 ORTHO05D007224 1.1e-32 143.7 119 65.5
Psat6g157560 Pisum sativum HOM05D006057 ORTHO05D007224 1.1e-32 143.7 121 64.5
CANSAT25G1403 Cannabis sativa HOM05D006057 ORTHO05D007224 1.8e-32 142.9 133 58.6
FvH4_6g36280 Fragaria vesca HOM05D006057 ORTHO05D007224 1.8e-32 142.9 129 61.2
Lj5g0024678 Lotus japonicus HOM05D006057 ORTHO05D007224 3.1e-32 142.1 119 65.5
Glyma.10G140400 Glycine max HOM05D006057 ORTHO05D007224 4.0e-32 141.7 121 66.9
MBI18_g03875_MAGBIO Magnolia biondii HOM05D006057 ORTHO05D007224 8.9e-32 140.6 135 56.3
Lj1C4G2 Lonicera japonica HOM05D006057 ORTHO05D007224 1.2e-31 140.2 131 63.4
MD17G1156700 Malus domestica HOM05D006057 ORTHO05D007224 1.2e-31 140.2 129 59.7
Lju2566A1T37 Lonicera japonica HOM05D006057 ORTHO05D007224 1.5e-31 139.8 133 62.4
Sed0018142 Sechium edule HOM05D006057 ORTHO05D007224 1.5e-31 139.8 132 62.9
Lalb_Chr02g0147311 Lupinus albus HOM05D006057 ORTHO05D007224 2.0e-31 139.4 122 64.8
BcaNung05509 Brassica carinata HOM05D006057 ORTHO05D007224 5.8e-31 137.9 140 57.9
Rhsim01G0001300 Rhododendron simsii HOM05D006057 ORTHO05D007224 7.6e-31 137.5 135 57.8
Ca_10224_v3 Cicer arietinum L. HOM05D006057 ORTHO05D007224 9.9e-31 137.1 123 65.0
ClCG10G013240 Citrullus lanatus HOM05D006057 ORTHO05D007224 2.2e-30 136.0 132 60.6
CAN.G843.33 Capsicum annuum HOM05D006057 ORTHO05D007224 4.9e-30 134.8 129 58.1
Peaxi162Scf00314g00430 Petunia axillaris HOM05D006057 ORTHO05D007224 8.4e-30 134.0 135 57.0
Nitab4.5_0002046g0150 Nicotiana tabacum HOM05D006057 ORTHO05D007224 1.9e-29 132.9 137 56.2
Nitab4.5_0002450g0080 Nicotiana tabacum HOM05D006057 ORTHO05D007224 1.9e-29 132.9 135 56.3
Phvul.007G207500 Phaseolus vulgaris HOM05D006057 ORTHO05D007224 1.9e-29 132.9 124 61.3
CsaV3_3G043390 Cucumis sativus L. HOM05D006057 ORTHO05D007224 4.2e-29 131.7 132 59.8
Migut.L01023 Erythranthe guttata HOM05D006057 ORTHO05D007224 4.2e-29 131.7 132 57.6
PGSC0003DMG400014183 Solanum tuberosum HOM05D006057 ORTHO05D007224 7.1e-29 131.0 135 56.3
Nitab4.5_0001841g0090 Nicotiana tabacum HOM05D006057 ORTHO05D007224 2.1e-28 129.4 141 54.6
Sopen03g037330 Solanum pennellii HOM05D006057 ORTHO05D007224 2.1e-28 129.4 135 55.6
Aqoxy5G02874 Aquilegia oxysepala HOM05D006057 ORTHO05D007224 2.7e-28 129.0 135 56.3
MELO3C026900.2 Cucumis melo HOM05D006057 ORTHO05D007224 2.7e-28 129.0 132 59.1
CDE01G0754 Ceratophyllum demersum HOM05D006057 ORTHO05D007224 3.5e-28 128.6 132 56.8
Migut.L00999 Erythranthe guttata HOM05D006057 ORTHO05D007224 3.5e-28 128.6 102 65.7
Solyc03g118440.3 Solanum lycopersicum HOM05D006057 ORTHO05D007224 3.5e-28 128.6 135 55.6
Migut.L00831 Erythranthe guttata HOM05D006057 ORTHO05D007224 6.0e-28 127.9 97 66.0
Potri.002G184600 Populus trichocarpa HOM05D006057 ORTHO05D007224 7.8e-28 127.5 101 69.3
HanXRQChr07g0194641 Helianthus annuus HOM05D006057 ORTHO05D007224 1.7e-27 126.3 133 56.4
PSO339G1810 Papaver somniferum HOM05D006057 ORTHO05D007224 1.7e-27 126.3 127 56.7
VMungo0720G1137 Vigna mungo HOM05D006057 ORTHO05D007224 1.7e-27 126.3 109 63.3
Oeu048368.1 Olea europaea HOM05D006057 ORTHO05D007224 3.0e-27 125.6 131 53.4
Nitab4.5_0010904g0040 Nicotiana tabacum HOM05D006057 ORTHO05D007224 3.9e-27 125.2 141 53.2
PSO170G4276 Papaver somniferum HOM05D006057 ORTHO05D007224 3.9e-27 125.2 130 56.9
Glyma.20G089200 Glycine max HOM05D006057 ORTHO05D007224 6.6e-27 124.4 136 56.6
SGA_v2.0_scaffold38G15005 Striga asiatica HOM05D006057 ORTHO05D007224 8.7e-27 124.0 135 52.6
Lsat_1_v5_gn_2_108401 Lactuca sativa HOM05D006057 ORTHO05D007224 1.5e-26 123.2 124 58.1
DCAR_012292 Daucus carota HOM05D006057 ORTHO05D007224 1.9e-26 122.9 135 50.4
ECA238G2998 Erigeron canadensis HOM05D006057 ORTHO05D007224 2.5e-26 122.5 133 54.9
DCAR_012291 Daucus carota HOM05D006057 ORTHO05D007224 3.3e-26 122.1 135 51.9
unitig_26.g10007 Utricularia gibba HOM05D006057 ORTHO05D007224 3.3e-26 122.1 136 52.2
Actinidia21332 Actinidia chinensis HOM05D006057 ORTHO05D007224 9.6e-26 120.6 137 51.1
PSO081G0045 Papaver somniferum HOM05D006057 ORTHO05D007224 2.1e-25 119.4 127 55.1
SGA_v2.0_scaffold36G14563 Striga asiatica HOM05D006057 ORTHO05D007224 1.8e-24 116.3 132 52.3
EL10Ac4g10232 Beta vulgaris HOM05D006057 ORTHO05D007224 9.0e-24 114.0 132 47.7
Cc08_g05070 Coffea canephora HOM05D006057 ORTHO05D007224 2.6e-23 112.5 96 61.5
Hund22023 Selenicereus undatus HOM05D006057 ORTHO05D007224 9.9e-23 110.5 134 50.7
Sc09g0000780 Simmondsia chinensis HOM05D006057 ORTHO05D007224 2.9e-22 109.0 95 57.9
Ah.06g194050 Amaranthus hybridus HOM05D006057 ORTHO05D007224 2.4e-21 105.9 128 48.4
CDE12G0816 Ceratophyllum demersum HOM05D006057 ORTHO05D007224 2.4e-21 105.9 73 72.6
CiPaw.07G127700 Carya illinoinensis HOM05D006057 ORTHO05D007224 5.4e-21 104.8 119 53.8
BcaNung05508 Brassica carinata HOM05D006057 ORTHO05D007224 9.3e-21 104.0 120 50.0
Ah.04g162100 Amaranthus hybridus HOM05D006057 ORTHO05D007224 1.2e-20 103.6 128 45.3
AUR62000136 Chenopodium quinoa HOM05D006057 ORTHO05D007224 1.6e-20 103.2 116 49.1
Gorai.001G149000 Gossypium raimondii HOM05D006057 ORTHO05D007224 7.9e-20 100.9 70 75.7
ATR0019G040 Amborella trichopoda HOM05D006057 ORTHO05D007224 1.8e-19 99.8 105 54.3
HPP92_026861 Vanilla planifolia HOM05D006057 ORTHO05D007224 2.3e-19 99.4 132 48.5
AUR62019316 Chenopodium quinoa HOM05D006057 ORTHO05D007224 1.1e-18 97.1 128 43.0
Gohir.D07G136950 Gossypium hirsutum HOM05D006057 ORTHO05D007224 1.1e-18 97.1 70 77.1
Dinv05504 Davidia involucrata HOM05D006057 ORTHO05D007224 1.6e-17 93.2 89 60.7
Zm00001eb000680 Zea mays HOM05D006057 ORTHO05D007224 6.2e-17 91.3 103 45.6
SEGI_31615 Sequoiadendron giganteum HOM05D006057 ORTHO05D007224 1.4e-16 90.1 92 51.1
TPR.G3076 Trifolium pratense HOM05D006057 ORTHO05D007224 1.8e-16 89.7 85 61.2
Os03g0108700 Oryza sativa ssp. japonica HOM05D006057 ORTHO05D007224 3.8e-14 82.0 81 50.6
SMO361G0765 Selaginella moellendorffii HOM05D006057 ORTHO05D007224 2.4e-13 79.3 85 50.6
Pp3c25_8550 Physcomitrium patens HOM05D006057 ORTHO05D007224 1.4e-08 63.5 96 34.4
CBR_g39249 Chara braunii HOM05D006057 ORTHO05D007224 4.0e-08 62.0 118 36.4
Mapoly0076s0084 Marchantia polymorpha HOM05D006057 ORTHO05D007224 2.9e-06 55.8 80 38.8


User provided reference genes

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