Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr5.8 Acer truncatum HOM05D008143 ORTHO05D010256 1.4e-35 152.5 85 100.0
Ca_26206_v3 Cicer arietinum L. HOM05D008143 ORTHO05D010256 2.0e-21 105.5 71 83.1
Lj1g0022952 Lotus japonicus HOM05D008143 ORTHO05D010256 4.5e-21 104.4 78 73.1
CiPaw.14G012000 Carya illinoinensis HOM05D008143 ORTHO05D010256 1.4e-19 99.4 82 68.3
Dinv43993 Davidia involucrata HOM05D008143 ORTHO05D010256 1.4e-19 99.4 83 67.5
Cpa.g.sc41.41 Carica papaya HOM05D008143 ORTHO05D010256 4.2e-19 97.8 74 71.6
Sed0007849 Sechium edule HOM05D000473 ORTHO05D009707 1.6e-18 95.9 77 70.1
Medtr7g034335 Medicago truncatula HOM05D008143 ORTHO05D010256 2.7e-18 95.1 71 71.8
QL04p024258 Quercus lobata HOM05D008143 ORTHO05D010256 4.6e-18 94.4 70 75.7
Dinv43549 Davidia involucrata HOM05D000307 ORTHO05D010256 6.0e-18 94.0 70 74.3
Dinv43557 Davidia involucrata HOM05D008143 ORTHO05D010256 6.0e-18 94.0 70 74.3
Ciclev10023977m.g Citrus clementina HOM05D008143 ORTHO05D010256 1.8e-17 92.4 83 66.3
Psat3g161880 Pisum sativum HOM05D008143 ORTHO05D010256 5.1e-17 90.9 72 70.8
TWI59G0267 Tripterygium wilfordii HOM05D008143 ORTHO05D010256 6.7e-17 90.5 86 65.1
arahy.Tifrunner.gnm1.ann1.H93UBA Arachis hypogaea HOM05D008143 ORTHO05D010256 8.7e-17 90.1 70 71.4
Glyma.06G310300 Glycine max HOM05D008143 ORTHO05D010256 1.1e-16 89.7 70 71.4
Glyma.04G128500 Glycine max HOM05D008143 ORTHO05D010256 2.5e-16 88.6 70 72.9
PGR042G2567 Punica granatum HOM05D008143 ORTHO05D010256 2.5e-16 88.6 78 64.1
Oeu020235.1 Olea europaea HOM05D008143 ORTHO05D010256 5.7e-16 87.4 75 66.7
CAN.G700.4 Capsicum annuum HOM05D008143 ORTHO05D010256 1.3e-15 86.3 75 68.0
Prupe.2G109300 Prunus persica HOM05D008143 ORTHO05D010256 1.3e-15 86.3 85 58.8
Sabra14G0137200 Salix brachista HOM05D008143 ORTHO05D010256 1.3e-15 86.3 79 63.3
Sabra14G0139000 Salix brachista HOM05D008143 ORTHO05D010256 2.2e-15 85.5 79 63.3
Hma1.2p1_0076F.1_g039560 Hydrangea macrophylla HOM05D008143 ORTHO05D010256 3.7e-15 84.7 85 62.4
GSVIVG01026763001 Vitis vinifera HOM05D008143 ORTHO05D010256 4.8e-15 84.3 70 67.1
PGSC0003DMG400001819 Solanum tuberosum HOM05D008143 ORTHO05D010256 1.4e-14 82.8 70 68.6
TAR636G2193 Trochodendron aralioides HOM05D008143 ORTHO05D010256 2.4e-14 82.0 75 65.3
Lalb_Chr19g0126471 Lupinus albus HOM05D008143 ORTHO05D010256 4.1e-14 81.3 87 59.8
arahy.Tifrunner.gnm1.ann1.3N3IDJ Arachis hypogaea HOM05D008143 ORTHO05D010256 5.3e-14 80.9 70 65.7
Migut.N01814 Erythranthe guttata HOM05D008143 ORTHO05D010256 5.3e-14 80.9 63 69.8
PSO017G2691 Papaver somniferum HOM05D008143 ORTHO05D010256 6.9e-14 80.5 74 62.2
Solyc01g080950.3 Solanum lycopersicum HOM05D008143 ORTHO05D010256 6.9e-14 80.5 82 61.0
Sopen01g032540 Solanum pennellii HOM05D008143 ORTHO05D010256 6.9e-14 80.5 70 67.1
ClCG05G002660 Citrullus lanatus HOM05D008143 ORTHO05D010256 9.0e-14 80.1 75 64.0
MELO3C006232.2 Cucumis melo HOM05D008143 ORTHO05D010256 9.0e-14 80.1 75 64.0
Actinidia21604 Actinidia chinensis HOM05D008143 ORTHO05D010256 1.2e-13 79.7 82 58.5
CiPaw.13G019200 Carya illinoinensis HOM05D008143 ORTHO05D010256 1.5e-13 79.3 72 63.9
Duzib128G1063 Durio zibethinus HOM05D008143 ORTHO05D010256 1.5e-13 79.3 72 63.9
CsaV3_3G010110 Cucumis sativus L. HOM05D008143 ORTHO05D010256 2.0e-13 79.0 75 62.7
Aqoxy3G02407 Aquilegia oxysepala HOM05D008143 ORTHO05D010256 2.6e-13 78.6 70 62.9
HanXRQChr01g0020571 Helianthus annuus HOM05D008143 ORTHO05D010256 2.6e-13 78.6 72 59.7
Thecc.10G157800 Theobroma cacao HOM05D008143 ORTHO05D010256 3.4e-13 78.2 79 59.5
Nitab4.5_0001209g0030 Nicotiana tabacum HOM05D008143 ORTHO05D010256 4.5e-13 77.8 78 61.5
SHI04152 Sapria himalayana HOM05D008143 ORTHO05D010256 4.5e-13 77.8 69 66.7
Migut.N01697 Erythranthe guttata HOM05D008143 ORTHO05D010256 5.9e-13 77.4 70 62.9
Cc02_g26140 Coffea canephora HOM05D008143 ORTHO05D010256 7.7e-13 77.0 77 59.7
Potri.014G178900 Populus trichocarpa HOM05D008143 ORTHO05D010256 1.0e-12 76.6 70 62.9
RcHm_v2.0_Chr1g0341271 Rosa chinensis HOM05D008143 ORTHO05D010256 2.2e-12 75.5 76 63.2
ECA248G2885 Erigeron canadensis HOM05D008143 ORTHO05D010256 2.9e-12 75.1 72 58.3
MD00G1098100 Malus domestica HOM05D008143 ORTHO05D010256 2.9e-12 75.1 73 61.6
Nn1g00548 Nelumbo nucifera HOM05D008143 ORTHO05D010256 6.5e-12 73.9 77 55.8
FvH4_7g08030 Fragaria vesca HOM05D008143 ORTHO05D010256 1.1e-11 73.2 63 66.7
FAN01G0067 Fragaria x ananassa HOM05D008143 ORTHO05D010256 1.1e-11 73.2 63 66.7
FAN10G1551 Fragaria x ananassa HOM05D008143 ORTHO05D010256 1.1e-11 73.2 63 66.7
Peaxi162Scf01110g00012 Petunia axillaris HOM05D008143 ORTHO05D010256 1.1e-11 73.2 60 70.0
MSTRG.28120 Avicennia marina HOM05D008143 ORTHO05D010256 1.9e-11 72.4 61 67.2
Sed0022797 Sechium edule HOM05D008143 ORTHO05D010256 3.2e-11 71.6 93 50.5
Phvul.005G016300 Phaseolus vulgaris HOM05D008143 ORTHO05D010256 5.5e-11 70.9 74 55.4
SGA_v2.0_scaffold4G02202 Striga asiatica HOM05D008143 ORTHO05D010256 7.2e-11 70.5 70 60.0
FAN03G3180 Fragaria x ananassa HOM05D008143 ORTHO05D010256 9.4e-11 70.1 63 63.5
PSO170G4801 Papaver somniferum HOM05D008143 ORTHO05D010256 1.4e-09 66.2 74 54.1
Rhsim01G0146400 Rhododendron simsii HOM05D002374 ORTHO05D010256 1.8e-09 65.9 49 69.4
Nn6g33614 Nelumbo nucifera HOM05D008143 ORTHO05D010256 3.9e-09 64.7 69 55.1
DCAR_015763 Daucus carota HOM05D008143 ORTHO05D010256 3.3e-08 61.6 70 57.1
AUR62023336 Chenopodium quinoa HOM05D008143 ORTHO05D010256 5.7e-08 60.8 57 63.2
Sabra05G0099100 Salix brachista HOM05D008143 ORTHO05D010256 2.2e-07 58.9 60 58.3
MD02G1236800 Malus domestica HOM05D008143 ORTHO05D010256 3.7e-07 58.2 45 68.9
Haze_02941 Corylus avellana HOM05D008143 ORTHO05D010256 1.8e-06 55.8 60 48.3
Thhalv10009848m.g Eutrema salsugineum HOM05D007324 ORTHO05D007884 2.4e-06 55.5 81 48.1
BolC8t47935H Brassica oleracea HOM05D007324 ORTHO05D007884 6.9e-06 53.9 89 47.2
VMungo1080G1030 Vigna mungo HOM05D008143 ORTHO05D010256 6.9e-06 53.9 60 51.7
A08p09020 Brassica napus HOM05D007324 ORTHO05D007884 9.1e-06 53.5 89 46.1
BraA08t32903Z Brassica rapa HOM05D007324 ORTHO05D007884 9.1e-06 53.5 89 46.1


User provided reference genes

Program Settings