Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr5.746 Acer truncatum HOM05D005894 ORTHO05D007461 2.6e-164 582.0 297 100.0
Ciclev10023878m.g Citrus clementina HOM05D005894 ORTHO05D007461 1.0e-128 463.8 308 77.9
Manes.01G241500 Manihot esculenta HOM05D005894 ORTHO05D007461 1.3e-120 436.8 292 72.3
TWI14G1398 Tripterygium wilfordii HOM05D005894 ORTHO05D007461 8.1e-118 427.6 293 70.3
Potri.002G177500 Populus trichocarpa HOM05D005894 ORTHO05D007461 6.8e-117 424.5 291 70.4
Gohir.A07G134700 Gossypium hirsutum HOM05D005894 ORTHO05D007461 2.2e-115 419.5 294 67.3
Thecc.01G335500 Theobroma cacao HOM05D005894 ORTHO05D007461 2.2e-115 419.5 299 68.6
AL1G11320 Arabidopsis lyrata HOM05D005894 ORTHO05D007461 4.9e-115 418.3 286 67.1
Cpa.g.sc141.18 Carica papaya HOM05D005894 ORTHO05D007461 4.9e-115 418.3 309 65.4
Sabra02G0136100 Salix brachista HOM05D005894 ORTHO05D007461 4.9e-115 418.3 292 68.5
Duzib133G0870 Durio zibethinus HOM05D005894 ORTHO05D007461 1.4e-114 416.8 301 68.4
Gorai.001G151400 Gossypium raimondii HOM05D005894 ORTHO05D007461 1.4e-114 416.8 294 67.3
THA.LOC104801356 Tarenaya hassleriana HOM05D005894 ORTHO05D007461 3.2e-114 415.6 292 70.9
TAR375G0623 Trochodendron aralioides HOM05D005894 ORTHO05D007461 4.1e-114 415.2 303 64.7
Cfa003752 Carpinus fangiana HOM05D005894 ORTHO05D007461 5.4e-114 414.8 288 67.7
Duzib138G0081 Durio zibethinus HOM05D005894 ORTHO05D007461 9.2e-114 414.1 299 67.2
Thhalv10008287m.g Eutrema salsugineum HOM05D005894 ORTHO05D007461 2.1e-113 412.9 293 65.2
CARHR001290 Cardamine hirsuta HOM05D005894 ORTHO05D007461 6.0e-113 411.4 297 66.0
Nn3g18834 Nelumbo nucifera HOM05D005894 ORTHO05D007461 7.8e-113 411.0 300 63.7
Haze_15713 Corylus avellana HOM05D005894 ORTHO05D007461 1.3e-112 410.2 288 67.4
A10p00720 Brassica napus HOM05D005894 ORTHO05D007461 1.7e-112 409.8 287 67.6
BraA10t42349Z Brassica rapa HOM05D005894 ORTHO05D007461 1.7e-112 409.8 287 67.9
Carub.0001s0103 Capsella rubella HOM05D005894 ORTHO05D007461 3.0e-112 409.1 293 64.5
Haze_15704 Corylus avellana HOM05D005894 ORTHO05D007461 3.9e-112 408.7 288 67.0
Sp1g01110 Schrenkiella parvula HOM05D005894 ORTHO05D007461 6.6e-112 407.9 291 66.0
C05p00760 Brassica napus HOM05D005894 ORTHO05D007461 8.6e-112 407.5 298 65.4
AT1G01180 Arabidopsis thaliana HOM05D005894 ORTHO05D007461 3.3e-111 405.6 285 66.0
BolC5t28860H Brassica oleracea HOM05D005894 ORTHO05D007461 3.3e-111 405.6 298 65.4
BcaB03g13563 Brassica carinata HOM05D005894 ORTHO05D007461 4.3e-111 405.2 298 65.4
Potri.014G103800 Populus trichocarpa HOM05D005894 ORTHO05D007461 7.3e-111 404.4 240 77.5
COL.COLO4_06220 Corchorus olitorius HOM05D005894 ORTHO05D007461 4.7e-110 401.7 291 67.7
CiPaw.01G080700 Carya illinoinensis HOM05D005894 ORTHO05D007461 4.0e-109 398.7 287 67.2
FAN10G2153 Fragaria x ananassa HOM05D005894 ORTHO05D007461 4.0e-109 398.7 289 66.4
arahy.Tifrunner.gnm1.ann1.IJN1JI Arachis hypogaea HOM05D005894 ORTHO05D007461 6.8e-109 397.9 306 62.1
Gohir.D12G119200 Gossypium hirsutum HOM05D005894 ORTHO05D007461 8.9e-109 397.5 294 67.7
arahy.Tifrunner.gnm1.ann1.UMNZ42 Arachis hypogaea HOM05D005894 ORTHO05D007461 1.2e-108 397.1 306 61.8
arahy.Tifrunner.gnm1.ann1.YB3WUJ Arachis hypogaea HOM05D005894 ORTHO05D007461 1.2e-108 397.1 306 61.8
Actinidia20275 Actinidia chinensis HOM05D005894 ORTHO05D007461 3.4e-108 395.6 297 63.3
Glyma.07G051400 Glycine max HOM05D005894 ORTHO05D007461 4.4e-108 395.2 293 66.6
Hma1.2p1_0309F.1_g120580 Hydrangea macrophylla HOM05D005894 ORTHO05D007461 4.4e-108 395.2 302 62.6
MBI04_g25320_MAGBIO Magnolia biondii HOM05D005894 ORTHO05D007461 4.4e-108 395.2 291 64.3
VMungo0331G1846 Vigna mungo HOM05D005894 ORTHO05D007461 5.8e-108 394.8 288 65.3
FAN06G1719 Fragaria x ananassa HOM05D005894 ORTHO05D007461 7.6e-108 394.4 289 66.8
FAN03G0327 Fragaria x ananassa HOM05D005894 ORTHO05D007461 9.9e-108 394.0 286 67.5
Aa31LG1G10550 Aethionema arabicum HOM05D005894 ORTHO05D007461 1.7e-107 393.3 286 63.3
arahy.Tifrunner.gnm1.ann1.FN9JYV Arachis hypogaea HOM05D005894 ORTHO05D007461 2.2e-107 392.9 306 61.1
FAN10G4192 Fragaria x ananassa HOM05D005894 ORTHO05D007461 2.2e-107 392.9 289 66.8
Ca_23494_v3 Cicer arietinum L. HOM05D005894 ORTHO05D007461 6.4e-107 391.3 292 66.4
Ca_29944_v3 Cicer arietinum L. HOM05D005894 ORTHO05D007461 6.4e-107 391.3 292 66.4
Phvul.010G118000 Phaseolus vulgaris HOM05D005894 ORTHO05D007461 1.9e-106 389.8 293 64.8
QL08p046715 Quercus lobata HOM05D005894 ORTHO05D007461 2.4e-106 389.4 288 62.2
Gohir.A12G115600 Gossypium hirsutum HOM05D005894 ORTHO05D007461 3.2e-106 389.0 294 65.6
vmacro04295 Vaccinium macrocarpon HOM05D005894 ORTHO05D007461 3.2e-106 389.0 297 62.3
Rhsim07G0001000 Rhododendron simsii HOM05D005894 ORTHO05D007461 1.6e-105 386.7 304 61.5
ClCG06G002760 Citrullus lanatus HOM05D005894 ORTHO05D007461 2.1e-105 386.3 297 60.3
Lalb_Chr17g0342931 Lupinus albus HOM05D005894 ORTHO05D007461 2.1e-105 386.3 287 63.4
Sed0016091 Sechium edule HOM05D005894 ORTHO05D007461 2.1e-105 386.3 293 60.8
ECA234G4535 Erigeron canadensis HOM05D005894 ORTHO05D007461 6.0e-105 384.8 290 59.3
Prupe.2G195400 Prunus persica HOM05D005894 ORTHO05D007461 6.0e-105 384.8 289 68.2
Lsat_1_v5_gn_4_31980 Lactuca sativa HOM05D005894 ORTHO05D007461 7.8e-105 384.4 293 60.1
Medtr8g024680 Medicago truncatula HOM05D005894 ORTHO05D007461 7.8e-105 384.4 290 62.8
PSO063G1123 Papaver somniferum HOM05D005894 ORTHO05D007461 1.3e-104 383.6 306 60.8
Lsat_1_v5_gn_4_31960 Lactuca sativa HOM05D005894 ORTHO05D007461 3.0e-104 382.5 290 60.3
Sc01g0002310 Simmondsia chinensis HOM05D005894 ORTHO05D007461 6.6e-104 381.3 293 61.8
MD07G1156900 Malus domestica HOM05D005894 ORTHO05D007461 1.5e-103 380.2 290 64.1
HanXRQChr17g0563091 Helianthus annuus HOM05D005894 ORTHO05D007461 2.5e-103 379.4 294 58.5
QL08p046701 Quercus lobata HOM05D005894 ORTHO05D007461 1.6e-102 376.7 273 66.7
Sed0008841 Sechium edule HOM05D005894 ORTHO05D007461 2.8e-102 375.9 288 63.5
ATR0090G035 Amborella trichopoda HOM05D005894 ORTHO05D007461 3.6e-102 375.6 284 59.5
Lj3g0011008 Lotus japonicus HOM05D005894 ORTHO05D007461 3.6e-102 375.6 291 62.5
MSTRG.20917 Avicennia marina HOM05D005894 ORTHO05D007461 8.1e-102 374.4 290 60.3
Oeu042964.1 Olea europaea HOM05D005894 ORTHO05D007461 8.1e-102 374.4 293 60.8
Psat4g216640 Pisum sativum HOM05D005894 ORTHO05D007461 2.4e-101 372.9 307 58.6
Dinv32633 Davidia involucrata HOM05D005894 ORTHO05D007461 4.0e-101 372.1 295 62.0
Ah.05g179110 Amaranthus hybridus HOM05D005894 ORTHO05D007461 6.9e-101 371.3 290 59.3
AUR62004546 Chenopodium quinoa HOM05D005894 ORTHO05D007461 1.5e-100 370.2 307 55.7
MELO3C022251.2 Cucumis melo HOM05D005894 ORTHO05D007461 1.5e-100 370.2 237 67.1
CsaV3_6G008930 Cucumis sativus L. HOM05D005894 ORTHO05D007461 2.6e-100 369.4 238 67.2
HanXRQChr16g0524851 Helianthus annuus HOM05D005894 ORTHO05D007461 2.2e-99 366.3 278 59.0
PSO782G1789 Papaver somniferum HOM05D005894 ORTHO05D007461 1.6e-97 360.1 307 58.0
Lj2g0016031 Lotus japonicus HOM05D005894 ORTHO05D007461 6.0e-97 358.2 281 62.3
Nitab4.5_0000307g0270 Nicotiana tabacum HOM05D005894 ORTHO05D007461 6.0e-97 358.2 292 59.9
AUR62022660 Chenopodium quinoa HOM05D005894 ORTHO05D007461 1.3e-96 357.1 223 67.7
TPR.G14294 Trifolium pratense HOM05D005894 ORTHO05D007461 1.3e-96 357.1 287 58.2
MSTRG.20916 Avicennia marina HOM05D005894 ORTHO05D007461 3.0e-96 355.9 292 56.8
PGSC0003DMG400018381 Solanum tuberosum HOM05D005894 ORTHO05D007461 6.6e-96 354.8 294 59.9
Gorai.008G129200 Gossypium raimondii HOM05D005894 ORTHO05D007461 1.1e-95 354.0 292 64.7
Peaxi162Scf00767g00044 Petunia axillaris HOM05D005894 ORTHO05D007461 3.3e-95 352.4 291 57.7
Solyc01g096380.1 Solanum lycopersicum HOM05D005894 ORTHO05D007461 1.1e-93 347.4 292 57.9
CAN.G1045.39 Capsicum annuum HOM05D005894 ORTHO05D007461 1.4e-93 347.1 292 56.8
SEGI_06461 Sequoiadendron giganteum HOM05D005894 ORTHO05D007461 1.4e-93 347.1 239 64.9
Lj9P603T40 Lonicera japonica HOM05D005894 ORTHO05D007461 1.8e-93 346.7 235 65.5
MBI04_g22377_MAGBIO Magnolia biondii HOM05D005894 ORTHO05D007461 2.4e-93 346.3 283 60.4
Sopen00g010520 Solanum pennellii HOM05D005894 ORTHO05D007461 2.4e-93 346.3 303 56.8
Cc02_g39840 Coffea canephora HOM05D005894 ORTHO05D007461 3.1e-93 345.9 306 56.9
Ah.07g207870 Amaranthus hybridus HOM05D005894 ORTHO05D007461 6.9e-93 344.7 288 54.2
Haze_15705 Corylus avellana HOM05D005894 ORTHO05D007461 7.1e-90 334.7 247 64.4
Gohir.D07G139300 Gossypium hirsutum HOM05D005894 ORTHO05D007461 5.6e-87 325.1 242 64.9
TPR.G25260 Trifolium pratense HOM05D005894 ORTHO05D007461 6.9e-85 318.2 198 71.7
Migut.B01913 Erythranthe guttata HOM05D005894 ORTHO05D007461 3.4e-84 315.8 289 53.6
MSTRG.26254 Avicennia marina HOM05D005894 ORTHO05D007461 1.7e-83 313.5 289 53.6
FAN01G2899 Fragaria x ananassa HOM05D005894 ORTHO05D007461 8.4e-83 311.2 209 66.0
Sc01g0002320 Simmondsia chinensis HOM05D005894 ORTHO05D007461 8.4e-83 311.2 297 50.2
Zm00001eb102910 Zea mays HOM05D005894 ORTHO05D007461 5.1e-80 302.0 238 60.1
Zm00001eb102940 Zea mays HOM05D005894 ORTHO05D007461 5.1e-80 302.0 238 60.1
SGA_v2.0_scaffold5G03060 Striga asiatica HOM05D005894 ORTHO05D007461 8.7e-80 301.2 227 57.7
Pp3c20_5150 Physcomitrium patens HOM05D005894 ORTHO05D007461 1.1e-79 300.8 225 56.0
Sc01g0000420 Simmondsia chinensis HOM05D005894 ORTHO05D007461 1.1e-79 300.8 293 49.1
Os09g0518900 Oryza sativa ssp. japonica HOM05D005894 ORTHO05D007461 4.3e-79 298.9 240 58.8
Mapoly0044s0088 Marchantia polymorpha HOM05D005894 ORTHO05D007461 1.3e-78 297.4 236 54.2
Pp3c23_20890 Physcomitrium patens HOM05D005894 ORTHO05D007461 2.1e-78 296.6 224 55.4
AagrBONN_evm.TU.Sc2ySwM_228.2264 Anthoceros agrestis HOM05D005894 ORTHO05D007461 5.3e-77 292.0 236 55.5
SalBow3G0292 Salvia bowleyana HOM05D005894 ORTHO05D007461 2.0e-76 290.0 210 59.5
SalBow3G4666 Salvia bowleyana HOM05D005894 ORTHO05D007461 2.0e-76 290.0 210 59.5
EL10Ac5g10561 Beta vulgaris HOM05D005894 ORTHO05D007461 2.6e-76 289.7 234 53.0
unitig_52.g17564 Utricularia gibba HOM05D005894 ORTHO05D007461 1.9e-74 283.5 227 56.8
SalBow6G4791 Salvia bowleyana HOM05D005894 ORTHO05D007461 7.1e-74 281.6 282 50.0
Oeu022737.1 Olea europaea HOM05D005894 ORTHO05D007461 7.7e-68 261.5 151 74.8
unitig_744.g24593 Utricularia gibba HOM05D005894 ORTHO05D007461 3.0e-64 249.6 293 45.1
unitig_744.g24591 Utricularia gibba HOM05D005894 ORTHO05D007461 1.5e-63 247.3 293 44.4
unitig_21.g20086 Utricularia gibba HOM05D005894 ORTHO05D007461 9.7e-63 244.6 279 43.4
FAN06G4171 Fragaria x ananassa HOM05D005894 ORTHO05D007461 5.0e-59 232.3 133 76.7
RcHm_v2.0_Chr1g0360831 Rosa chinensis HOM05D005894 ORTHO05D007461 4.8e-54 215.7 179 65.4
EL10Ac1g00202 Beta vulgaris HOM05D005894 ORTHO05D007461 4.1e-53 212.6 137 68.6
unitig_744.g24581 Utricularia gibba HOM05D005894 ORTHO05D007461 1.5e-52 210.7 183 52.5
Sc17g0001460 Simmondsia chinensis HOM05D005894 ORTHO05D387453 1.8e-48 197.2 286 37.8
SMO367G0414 Selaginella moellendorffii HOM05D005894 ORTHO05D007461 2.6e-47 193.4 137 58.4
RcHm_v2.0_Chr1g0360821 Rosa chinensis HOM05D005894 ORTHO05D007461 7.2e-42 175.3 105 71.4
unitig_21.g20129 Utricularia gibba HOM05D005894 ORTHO05D007461 2.9e-27 126.7 103 55.3
Sc22g0003370 Simmondsia chinensis HOM05D005894 ORTHO05D007461 1.5e-18 97.8 147 37.4
unitig_21.g20130 Utricularia gibba HOM05D005894 ORTHO05D007461 3.7e-14 83.2 72 50.0
SMO195G0042 Selaginella moellendorffii HOM05D005894 ORTHO05D376219 8.9e-08 62.0 69 43.5
unitig_52.g17562 Utricularia gibba HOM05D005894 ORTHO05D420364 2.2e-06 57.4 46 52.2


User provided reference genes

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