Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr5.731 Acer truncatum HOM05D006631 ORTHO05D008359 2.7e-152 542.0 274 100.0
Thecc.01G337000 Theobroma cacao HOM05D006631 ORTHO05D008359 5.5e-121 438.0 274 79.2
Gorai.007G111000 Gossypium raimondii HOM05D006631 ORTHO05D008359 3.3e-118 428.7 274 77.7
Duzib138G0935 Durio zibethinus HOM05D006631 ORTHO05D008359 4.8e-117 424.9 274 77.7
Gohir.D11G103700 Gossypium hirsutum HOM05D006631 ORTHO05D008359 6.3e-117 424.5 274 76.6
QL08p046273 Quercus lobata HOM05D006631 ORTHO05D008359 1.4e-116 423.3 275 79.6
Gohir.A11G099200 Gossypium hirsutum HOM05D006631 ORTHO05D008359 3.1e-116 422.2 274 76.3
TWI59G0463 Tripterygium wilfordii HOM05D006631 ORTHO05D008359 5.3e-116 421.4 275 78.5
CiPaw.01G079400 Carya illinoinensis HOM05D006631 ORTHO05D008359 5.5e-113 411.4 276 77.9
Glyma.19G258300 Glycine max HOM05D006631 ORTHO05D008359 1.6e-112 409.8 280 75.4
Dinv34238 Davidia involucrata HOM05D006631 ORTHO05D008359 2.1e-112 409.5 276 75.7
Ciclev10021628m.g Citrus clementina HOM05D006631 ORTHO05D008359 4.7e-112 408.3 276 75.4
Manes.05G019200 Manihot esculenta HOM05D006631 ORTHO05D008359 4.7e-112 408.3 275 75.6
COL.COLO4_06257 Corchorus olitorius HOM05D006631 ORTHO05D008359 1.0e-111 407.1 262 79.4
Potri.014G102400 Populus trichocarpa HOM05D006631 ORTHO05D008359 6.7e-111 404.4 278 74.8
CsaV3_3G007830 Cucumis sativus L. HOM05D006631 ORTHO05D008359 4.4e-110 401.7 274 76.3
GSVIVG01027398001 Vitis vinifera HOM05D006631 ORTHO05D008359 5.7e-110 401.4 276 75.0
Glyma.03G259400 Glycine max HOM05D006631 ORTHO05D008359 9.7e-110 400.6 278 74.8
Cpa.g.sc144.12 Carica papaya HOM05D006631 ORTHO05D008359 1.3e-109 400.2 274 74.1
MD01G1086200 Malus domestica HOM05D006631 ORTHO05D008359 4.8e-109 398.3 274 73.4
Cfa003762 Carpinus fangiana HOM05D006631 ORTHO05D008359 8.2e-109 397.5 276 75.0
Lj1g0014889 Lotus japonicus HOM05D006631 ORTHO05D008359 1.1e-108 397.1 275 72.7
Phvul.006G115700 Phaseolus vulgaris HOM05D006631 ORTHO05D008359 1.1e-108 397.1 279 73.1
Prupe.2G193800 Prunus persica HOM05D006631 ORTHO05D008359 1.2e-107 393.7 274 73.4
RcHm_v2.0_Chr1g0360621 Rosa chinensis HOM05D006631 ORTHO05D008359 2.7e-107 392.5 278 71.9
Lalb_Chr19g0133561 Lupinus albus HOM05D006631 ORTHO05D008359 1.0e-106 390.6 277 70.8
FvH4_7g17240 Fragaria vesca HOM05D006631 ORTHO05D008359 3.8e-106 388.7 277 71.8
CANSAT56G2365 Cannabis sativa HOM05D006631 ORTHO05D008359 5.0e-106 388.3 282 70.6
ClCG05G000610 Citrullus lanatus HOM05D006631 ORTHO05D008359 5.0e-106 388.3 274 73.4
TAR375G0108 Trochodendron aralioides HOM05D006631 ORTHO05D008359 1.9e-105 386.3 277 71.8
MELO3C005999.2 Cucumis melo HOM05D006631 ORTHO05D008359 2.5e-105 386.0 303 69.0
Eucgr.D02642 Eucalyptus grandis HOM05D006631 ORTHO05D008359 4.2e-105 385.2 282 69.9
Psat3g001400 Pisum sativum HOM05D006631 ORTHO05D008359 4.2e-105 385.2 276 71.7
FAN06G3756 Fragaria x ananassa HOM05D006631 ORTHO05D008359 1.2e-104 383.6 279 71.3
Nitab4.5_0002527g0020 Nicotiana tabacum HOM05D006631 ORTHO05D008359 1.6e-104 383.3 282 72.3
PSO063G1328 Papaver somniferum HOM05D006631 ORTHO05D008359 1.6e-104 383.3 288 67.7
Medtr7g117970 Medicago truncatula HOM05D006631 ORTHO05D008359 2.7e-104 382.5 278 70.1
PSO782G2421 Papaver somniferum HOM05D006631 ORTHO05D008359 6.1e-104 381.3 286 68.9
FAN06G3280 Fragaria x ananassa HOM05D006631 ORTHO05D008359 1.8e-103 379.8 279 71.0
Actinidia28101 Actinidia chinensis HOM05D006631 ORTHO05D008359 3.0e-103 379.0 275 71.6
Solyc01g096240.4 Solanum lycopersicum HOM05D006631 ORTHO05D008359 3.0e-103 379.0 282 70.2
THA.LOC104817387 Tarenaya hassleriana HOM05D006631 ORTHO05D008359 6.8e-103 377.9 279 69.9
PGSC0003DMG400000125 Solanum tuberosum HOM05D006631 ORTHO05D008359 8.8e-103 377.5 282 70.2
Sopen01g040000 Solanum pennellii HOM05D006631 ORTHO05D008359 1.2e-102 377.1 282 69.5
CSS0022670 Camellia sinensis var. sinensis HOM05D006631 ORTHO05D008359 1.5e-102 376.7 275 71.3
Ca_09530_v3 Cicer arietinum L. HOM05D006631 ORTHO05D008359 2.6e-102 375.9 276 68.8
Hund16731 Selenicereus undatus HOM05D006631 ORTHO05D008359 2.2e-101 372.9 275 69.5
PGR031G0416 Punica granatum HOM05D006631 ORTHO05D008359 6.3e-101 371.3 277 69.0
AUR62022720 Chenopodium quinoa HOM05D006631 ORTHO05D008359 8.3e-101 370.9 284 69.4
Nitab4.5_0000307g0140 Nicotiana tabacum HOM05D006631 ORTHO05D008359 1.1e-100 370.5 270 73.0
arahy.Tifrunner.gnm1.ann1.588I57 Arachis hypogaea HOM05D006631 ORTHO05D008359 2.4e-100 369.4 281 67.3
arahy.Tifrunner.gnm1.ann1.NC261Q Arachis hypogaea HOM05D006631 ORTHO05D008359 2.4e-100 369.4 281 68.0
Phvul.010G116700 Phaseolus vulgaris HOM05D006631 ORTHO05D008359 2.4e-100 369.4 278 66.2
AUR62004534 Chenopodium quinoa HOM05D006631 ORTHO05D008359 9.1e-100 367.5 281 67.6
TPR.G4790 Trifolium pratense HOM05D006631 ORTHO05D008359 9.1e-100 367.5 283 67.8
Sabra14G0075400 Salix brachista HOM05D006631 ORTHO05D008359 1.2e-99 367.1 202 86.1
Nn1g00373 Nelumbo nucifera HOM05D006631 ORTHO05D008359 2.0e-99 366.3 284 68.7
ECA240G4795 Erigeron canadensis HOM05D006631 ORTHO05D008359 4.5e-99 365.2 275 69.1
MSTRG.4800 Avicennia marina HOM05D006631 ORTHO05D008359 1.3e-98 363.6 279 68.5
SalBow5G1997 Salvia bowleyana HOM05D006631 ORTHO05D008359 1.7e-98 363.2 279 69.9
Aa31LG10G15890 Aethionema arabicum HOM05D006631 ORTHO05D008359 3.8e-98 362.1 275 66.5
Lj9A602T26 Lonicera japonica HOM05D006631 ORTHO05D008359 8.6e-98 360.9 304 64.8
Rhsim01G0176500 Rhododendron simsii HOM05D006631 ORTHO05D008359 3.2e-97 359.0 284 68.3
FAN03G0022 Fragaria x ananassa HOM05D006631 ORTHO05D008359 2.1e-96 356.3 240 73.8
Haze_15698 Corylus avellana HOM05D006631 ORTHO05D008359 4.7e-96 355.1 201 84.6
FAN10G3243 Fragaria x ananassa HOM05D006631 ORTHO05D008359 8.0e-96 354.4 225 76.9
MBI04_g33414_MAGBIO Magnolia biondii HOM05D006631 ORTHO05D008359 8.0e-96 354.4 307 64.8
FAN01G0947 Fragaria x ananassa HOM05D006631 ORTHO05D008359 1.0e-95 354.0 205 81.5
Peaxi162Scf00767g00111 Petunia axillaris HOM05D006631 ORTHO05D008359 8.8e-95 350.9 202 84.7
AL5G44450 Arabidopsis lyrata HOM05D006631 ORTHO05D008359 2.6e-94 349.4 221 75.6
CARHR172210 Cardamine hirsuta HOM05D006631 ORTHO05D008359 2.6e-94 349.4 225 74.2
Ah.05g179220 Amaranthus hybridus HOM05D006631 ORTHO05D008359 9.8e-94 347.4 277 65.0
CAN.G1415.2 Capsicum annuum HOM05D006631 ORTHO05D008359 1.7e-93 346.7 202 82.7
Migut.N01525 Erythranthe guttata HOM05D006631 ORTHO05D008359 1.7e-93 346.7 297 62.6
VMungo0540G1103 Vigna mungo HOM05D006631 ORTHO05D008359 1.7e-93 346.7 205 82.4
vmacro12589 Vaccinium macrocarpon HOM05D006631 ORTHO05D008359 4.9e-93 345.1 213 79.8
A09p53900 Brassica napus HOM05D006631 ORTHO05D008359 8.3e-93 344.4 221 74.2
BraA09t40806Z Brassica rapa HOM05D006631 ORTHO05D008359 8.3e-93 344.4 221 74.2
Glyma.16G021600 Glycine max HOM05D006631 ORTHO05D008359 1.1e-92 344.0 276 65.6
AT3G61870 Arabidopsis thaliana HOM05D006631 ORTHO05D008359 1.4e-92 343.6 221 73.8
Thhalv10006166m.g Eutrema salsugineum HOM05D006631 ORTHO05D008359 3.1e-92 342.4 221 74.2
Carub.0005s2861 Capsella rubella HOM05D006631 ORTHO05D008359 4.1e-92 342.0 274 63.5
Sed0011774 Sechium edule HOM05D006631 ORTHO05D008359 5.4e-92 341.7 273 66.3
C08p36710 Brassica napus HOM05D006631 ORTHO05D008359 7.0e-92 341.3 282 64.2
BolC8t51253H Brassica oleracea HOM05D006631 ORTHO05D008359 7.0e-92 341.3 282 64.2
Lalb_Chr17g0342841 Lupinus albus HOM05D006631 ORTHO05D008359 9.2e-92 340.9 275 65.1
Sc23g0001960 Simmondsia chinensis HOM05D006631 ORTHO05D008359 1.2e-91 340.5 202 81.7
MSTRG.28278 Avicennia marina HOM05D006631 ORTHO05D008359 2.0e-91 339.7 265 67.5
Sp5g01490 Schrenkiella parvula HOM05D006631 ORTHO05D008359 7.8e-91 337.8 221 72.9
VMungo0331G0918 Vigna mungo HOM05D006631 ORTHO05D008359 2.3e-90 336.3 209 77.0
Lsat_1_v5_gn_3_141021 Lactuca sativa HOM05D006631 ORTHO05D008359 1.1e-89 334.0 275 64.4
SEGI_25065 Sequoiadendron giganteum HOM05D006631 ORTHO05D008359 1.5e-89 333.6 225 74.7
CDE07G1250 Ceratophyllum demersum HOM05D006631 ORTHO05D008359 4.7e-88 328.6 240 70.4
HanXRQChr03g0094051 Helianthus annuus HOM05D006631 ORTHO05D008359 5.2e-87 325.1 282 62.8
ATR0620G070 Amborella trichopoda HOM05D006631 ORTHO05D008359 2.6e-86 322.8 295 60.3
HPP92_002500 Vanilla planifolia HOM05D006631 ORTHO05D008359 2.4e-84 316.2 271 63.8
Os02g0122500 Oryza sativa ssp. japonica HOM05D006631 ORTHO05D008359 5.4e-84 315.1 214 73.4
Oeu007870.1 Olea europaea HOM05D006631 ORTHO05D008359 4.7e-80 302.0 178 82.6
Mapoly0049s0137 Marchantia polymorpha HOM05D006631 ORTHO05D008359 8.0e-80 301.2 208 70.2
SMO143G0155 Selaginella moellendorffii HOM05D006631 ORTHO05D008359 1.4e-79 300.4 199 72.4
FAN10G2512 Fragaria x ananassa HOM05D006631 ORTHO05D008359 7.0e-76 288.1 280 58.9
BcaC07g42601 Brassica carinata HOM05D006631 ORTHO05D008359 2.7e-75 286.2 221 65.2
Pp3c5_3210 Physcomitrium patens HOM05D006631 ORTHO05D008359 5.6e-73 278.5 236 61.4
arahy.Tifrunner.gnm1.ann1.S1C8P4 Arachis hypogaea HOM05D006631 ORTHO05D008359 3.1e-71 272.7 282 57.8
CBR_g37545 Chara braunii HOM05D006631 ORTHO05D008359 7.5e-70 268.1 198 66.7
MD07G1155100 Malus domestica HOM05D006631 ORTHO05D008359 1.7e-69 266.9 155 81.9
EL10Ac1g00220 Beta vulgaris HOM05D006631 ORTHO05D008359 2.9e-69 266.2 216 62.0
arahy.Tifrunner.gnm1.ann1.GG2XE6 Arachis hypogaea HOM05D006631 ORTHO05D008359 7.8e-67 258.1 241 60.2
DCAR_008654 Daucus carota HOM05D006631 ORTHO05D008359 2.5e-65 253.1 180 68.9
Cc02_g39740 Coffea canephora HOM05D006631 ORTHO05D008359 7.3e-65 251.5 202 63.4
SGA_v2.0_scaffold581G53044 Striga asiatica HOM05D006631 ORTHO05D008359 2.1e-64 250.0 157 77.1
MCO07G366 Micromonas commoda HOM05D006631 ORTHO05D008359 1.5e-62 243.8 233 52.8
Cre12.g519300 Chlamydomonas reinhardtii HOM05D006631 ORTHO05D008359 4.4e-62 242.3 220 57.7
CDE09G1080 Ceratophyllum demersum HOM05D006631 ORTHO05D008359 3.9e-58 229.2 202 56.4
PRCOL_00004956 Prasinoderma coloniale HOM05D006631 ORTHO05D008359 5.2e-55 218.8 193 55.4
CSS0025910 Camellia sinensis var. sinensis HOM05D006631 ORTHO05D008359 2.1e-51 206.8 116 83.6
AagrBONN_evm.TU.Sc2ySwM_362.2495 Anthoceros agrestis HOM05D006631 ORTHO05D008359 8.4e-45 184.9 114 78.1
unitig_8.g3405 Utricularia gibba HOM05D006631 ORTHO05D008359 1.0e-42 177.9 175 58.3
TAR374G1086 Trochodendron aralioides HOM05D000482 ORTHO05D000349 2.4e-39 166.8 199 48.2
TAR374G0170 Trochodendron aralioides HOM05D000482 ORTHO05D000349 4.3e-25 119.4 81 67.9
TAR374G1450 Trochodendron aralioides HOM05D000482 ORTHO05D000349 7.4e-25 118.6 184 41.3
GSVIVG01001070001 Vitis vinifera HOM05D006631 ORTHO05D008359 5.7e-09 65.9 44 70.5
unitig_22.g6820 Utricularia gibba HOM05D006631 ORTHO05D008359 4.8e-08 62.8 63 55.6


User provided reference genes

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