Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr5.699 Acer truncatum HOM05D000401 ORTHO05D000252 3.1e-102 375.2 191 100.0
Atru.chr1.2520 Acer truncatum HOM05D000401 ORTHO05D000252 6.4e-76 287.7 173 87.9
Ciclev10003798m.g Citrus clementina HOM05D000401 ORTHO05D000252 1.7e-23 113.6 175 45.1
Potri.019G128500 Populus trichocarpa HOM05D000401 ORTHO05D000252 1.4e-22 110.5 204 41.2
Dinv12271 Davidia involucrata HOM05D000401 ORTHO05D000252 4.1e-22 109.0 180 44.4
Potri.013G155200 Populus trichocarpa HOM05D000401 ORTHO05D000252 5.3e-22 108.6 203 40.9
GSVIVG01024579001 Vitis vinifera HOM05D000401 ORTHO05D000252 3.5e-21 105.9 194 39.7
Sabra19G0126100 Salix brachista HOM05D000401 ORTHO05D000252 5.9e-21 105.1 206 40.3
Sabra13G0125000 Salix brachista HOM05D000401 ORTHO05D000252 1.3e-20 104.0 207 40.1
Manes.18G139400 Manihot esculenta HOM05D000401 ORTHO05D000252 2.1e-18 96.7 199 37.2
Thecc.09G362400 Theobroma cacao HOM05D000401 ORTHO05D000252 3.6e-18 95.9 199 43.7
RcHm_v2.0_Chr5g0072651 Rosa chinensis HOM05D000401 ORTHO05D000252 1.8e-17 93.6 194 41.8
Rhsim13G0060700 Rhododendron simsii HOM05D000401 ORTHO05D000252 2.3e-17 93.2 198 39.9
Prupe.6G042700 Prunus persica HOM05D000401 ORTHO05D000252 3.0e-17 92.8 210 41.0
Cfa011818 Carpinus fangiana HOM05D000401 ORTHO05D000252 4.0e-17 92.4 192 41.1
Peaxi162Scf00239g00023 Petunia axillaris HOM05D000401 ORTHO05D000252 5.2e-17 92.0 188 38.8
TWI79G0773 Tripterygium wilfordii HOM05D000401 ORTHO05D000252 5.2e-17 92.0 180 40.6
Haze_24454 Corylus avellana HOM05D000401 ORTHO05D000252 6.7e-17 91.7 192 39.6
TAR623G1774 Trochodendron aralioides HOM05D000401 ORTHO05D000252 8.8e-17 91.3 191 40.3
Gohir.A13G235600 Gossypium hirsutum HOM05D000401 ORTHO05D000252 5.7e-16 88.6 178 39.3
COL.COLO4_11197 Corchorus olitorius HOM05D000401 ORTHO05D000252 7.5e-16 88.2 180 38.9
MD03G1053600 Malus domestica HOM05D000401 ORTHO05D000252 1.7e-15 87.0 183 39.9
CiPaw.13G065000 Carya illinoinensis HOM05D000401 ORTHO05D000252 2.8e-15 86.3 207 36.7
Glyma.02G235600 Glycine max HOM05D000401 ORTHO05D000252 2.8e-15 86.3 212 37.7
Phvul.006G077000 Phaseolus vulgaris HOM05D000401 ORTHO05D000252 3.7e-15 85.9 198 39.4
Sopen06g033840 Solanum pennellii HOM05D000401 ORTHO05D000252 3.7e-15 85.9 195 38.5
Glyma.14G203600 Glycine max HOM05D000401 ORTHO05D000252 8.2e-15 84.7 206 35.4
Phvul.008G248300 Phaseolus vulgaris HOM05D000401 ORTHO05D000252 8.2e-15 84.7 207 36.7
Solyc06g082460.1 Solanum lycopersicum HOM05D000401 ORTHO05D000252 8.2e-15 84.7 201 37.3
CAN.G3449.1 Capsicum annuum HOM05D000401 ORTHO05D000252 1.1e-14 84.3 172 40.7
Gohir.D13G241300 Gossypium hirsutum HOM05D000401 ORTHO05D000252 1.1e-14 84.3 178 38.2
Gorai.013G272200 Gossypium raimondii HOM05D000401 ORTHO05D000252 1.1e-14 84.3 178 38.2
TAR633G0869 Trochodendron aralioides HOM05D000401 ORTHO05D000252 1.4e-14 84.0 197 36.0
MD11G1055200 Malus domestica HOM05D000401 ORTHO05D000252 1.8e-14 83.6 175 40.0
Oeu058243.1 Olea europaea HOM05D000401 ORTHO05D000252 1.8e-14 83.6 117 50.4
Peaxi162Scf00390g00337 Petunia axillaris HOM05D000401 ORTHO05D000252 2.4e-14 83.2 174 38.5
Lj2A1100T23 Lonicera japonica HOM05D000401 ORTHO05D000252 5.3e-14 82.0 161 39.1
VMungo0647G0200 Vigna mungo HOM05D000401 ORTHO05D000252 5.3e-14 82.0 211 36.0
FvH4_3g40310 Fragaria vesca HOM05D000401 ORTHO05D000252 7.0e-14 81.6 196 39.3
QL01p025102 Quercus lobata HOM05D000401 ORTHO05D000252 9.1e-14 81.3 170 40.6
PGSC0003DMG400030384 Solanum tuberosum HOM05D000401 ORTHO05D000252 9.1e-14 81.3 189 35.4
VMungo0540G1589 Vigna mungo HOM05D000401 ORTHO05D000252 1.2e-13 80.9 196 38.8
Hma1.2p1_0119F.1_g056880 Hydrangea macrophylla HOM05D000401 ORTHO05D000252 1.6e-13 80.5 199 39.2
Duzib268G1597 Durio zibethinus HOM05D000401 ORTHO05D000252 3.5e-13 79.3 211 31.3
Glyma.18G054200 Glycine max HOM05D000401 ORTHO05D000252 3.5e-13 79.3 199 38.2
Glyma.11G159800 Glycine max HOM05D000401 ORTHO05D000252 7.7e-13 78.2 204 39.2
Nn2g10338 Nelumbo nucifera HOM05D000401 ORTHO05D000252 1.0e-12 77.8 211 36.5
Lsat_1_v5_gn_9_14101 Lactuca sativa HOM05D000401 ORTHO05D000252 1.3e-12 77.4 178 38.8
MSTRG.17910 Avicennia marina HOM05D000401 ORTHO05D000252 1.7e-12 77.0 108 47.2
LjContig00141g0026474 Lotus japonicus HOM05D000401 ORTHO05D000252 1.7e-12 77.0 174 35.6
Potri.006G107700 Populus trichocarpa HOM05D000401 ORTHO05D000252 2.9e-12 76.3 204 34.3
Actinidia23175 Actinidia chinensis HOM05D000401 ORTHO05D000252 3.8e-12 75.9 185 34.1
PSO384G4888 Papaver somniferum HOM05D000401 ORTHO05D000252 8.5e-12 74.7 199 37.7
Cc01_g15220 Coffea canephora HOM05D000401 ORTHO05D000252 1.1e-11 74.3 215 35.3
Hma1.2p1_1637F.1_g294920 Hydrangea macrophylla HOM05D000401 ORTHO05D000252 1.9e-11 73.6 175 36.0
Ca_05701_v3 Cicer arietinum L. HOM05D000401 ORTHO05D000252 2.5e-11 73.2 178 36.5
Ca_30027_v3 Cicer arietinum L. HOM05D000401 ORTHO05D000252 2.5e-11 73.2 178 36.5
Duzib212G0735 Durio zibethinus HOM05D000401 ORTHO05D000252 2.5e-11 73.2 215 32.1
CiPaw.10G164400 Carya illinoinensis HOM05D000401 ORTHO05D000252 4.2e-11 72.4 198 31.8
Thecc.04G154200 Theobroma cacao HOM05D000401 ORTHO05D000252 5.5e-11 72.0 213 31.9
Lalb_Chr17g0345601 Lupinus albus HOM05D000401 ORTHO05D000252 7.2e-11 71.6 189 34.9
PSO339G2968 Papaver somniferum HOM05D000401 ORTHO05D000252 7.2e-11 71.6 192 36.5
Medtr5g075210 Medicago truncatula HOM05D000401 ORTHO05D000252 9.4e-11 71.2 194 35.6
CDE06G1575 Ceratophyllum demersum HOM05D000401 ORTHO05D000252 1.6e-10 70.5 173 39.3
TPR.G25743 Trifolium pratense HOM05D000401 ORTHO05D000252 1.6e-10 70.5 191 35.1
Sc21g0004850 Simmondsia chinensis HOM05D000401 ORTHO05D000252 3.6e-10 69.3 138 40.6
Atru.chr8.2381 Acer truncatum HOM05D000401 ORTHO05D000252 1.0e-09 67.8 121 40.5
Lj6g0003199 Lotus japonicus HOM05D000401 ORTHO05D000252 1.0e-09 67.8 167 35.9
Prupe.6G290900 Prunus persica HOM05D000401 ORTHO05D000252 1.0e-09 67.8 230 29.6
Ciclev10011867m.g Citrus clementina HOM05D000401 ORTHO05D000252 1.4e-09 67.4 219 30.1
FAN05G5672 Fragaria x ananassa HOM05D000401 ORTHO05D000252 1.8e-09 67.0 116 42.2
Nitab4.5_0000002g0220 Nicotiana tabacum HOM05D000401 ORTHO05D000252 2.3e-09 66.6 133 35.3
Nitab4.5_0001868g0040 Nicotiana tabacum HOM05D000401 ORTHO05D000252 2.3e-09 66.6 108 42.6
FAN21G2616 Fragaria x ananassa HOM05D000401 ORTHO05D000252 3.0e-09 66.2 186 37.6
Sabra04G0151800 Salix brachista HOM05D000401 ORTHO05D000252 3.0e-09 66.2 221 32.6
FAN25G0123 Fragaria x ananassa HOM05D000401 ORTHO05D000252 5.2e-09 65.5 186 37.6
TAR369G0195 Trochodendron aralioides HOM05D000401 ORTHO05D000252 5.2e-09 65.5 183 37.2
Lalb_Chr15g0085931 Lupinus albus HOM05D000401 ORTHO05D000252 8.8e-09 64.7 187 34.8
Sed0028103 Sechium edule HOM05D000401 ORTHO05D000252 8.8e-09 64.7 206 31.6
Lalb_Chr04g0251791 Lupinus albus HOM05D000401 ORTHO05D000252 2.0e-08 63.5 199 31.2
Manes.09G116400 Manihot esculenta HOM05D000401 ORTHO05D000252 2.0e-08 63.5 219 29.7
Dinv04838 Davidia involucrata HOM05D000401 ORTHO05D000252 2.6e-08 63.2 143 39.9
Nn5g26877 Nelumbo nucifera HOM05D000401 ORTHO05D000252 2.6e-08 63.2 208 33.2
Psat2g052080 Pisum sativum HOM05D000401 ORTHO05D000252 4.4e-08 62.4 196 35.7
Duzib151G0166 Durio zibethinus HOM05D000401 ORTHO05D000252 7.5e-08 61.6 217 31.3
FAN16G0556 Fragaria x ananassa HOM05D000401 ORTHO05D000252 7.5e-08 61.6 183 35.5
QL07p032580 Quercus lobata HOM05D000401 ORTHO05D000252 7.5e-08 61.6 204 33.3
CANSAT54G0863 Cannabis sativa HOM05D000401 ORTHO05D000252 1.3e-07 60.8 180 33.3
FAN02G1305 Fragaria x ananassa HOM05D000401 ORTHO05D000252 1.3e-07 60.8 116 40.5
FAN09G3930 Fragaria x ananassa HOM05D000401 ORTHO05D000252 1.7e-07 60.5 116 39.7
CDE07G0491 Ceratophyllum demersum HOM05D000401 ORTHO05D000252 2.2e-07 60.1 186 32.8
THA.LOC104800784 Tarenaya hassleriana HOM05D000401 ORTHO05D000252 2.8e-07 59.7 110 40.9
Sabra06G0083800 Salix brachista HOM05D000401 ORTHO05D000252 3.7e-07 59.3 199 31.2
SalBow2G3266 Salvia bowleyana HOM05D000401 ORTHO05D000252 3.7e-07 59.3 103 39.8
Potri.016G134200 Populus trichocarpa HOM05D000401 ORTHO05D000252 4.8e-07 58.9 223 30.9
Gohir.A10G149600 Gossypium hirsutum HOM05D000401 ORTHO05D000252 6.3e-07 58.5 184 32.1
Lj1g0008429 Lotus japonicus HOM05D000401 ORTHO05D000252 6.3e-07 58.5 193 33.7
Gorai.011G129100 Gossypium raimondii HOM05D000401 ORTHO05D000252 8.3e-07 58.2 189 32.8
Phvul.008G084900 Phaseolus vulgaris HOM05D000401 ORTHO05D000252 8.3e-07 58.2 195 28.7
PSO170G2335 Papaver somniferum HOM05D000401 ORTHO05D000252 1.1e-06 57.8 150 33.3
AT5G58360 Arabidopsis thaliana HOM05D000401 ORTHO05D000252 1.4e-06 57.4 170 34.7
CiPaw.14G051600 Carya illinoinensis HOM05D000401 ORTHO05D000252 1.8e-06 57.0 198 30.8
Gohir.D10G117200 Gossypium hirsutum HOM05D000401 ORTHO05D000252 1.8e-06 57.0 189 32.8
vmacro02887 Vaccinium macrocarpon HOM05D000401 ORTHO05D000252 1.8e-06 57.0 159 37.7
MSTRG.5512 Avicennia marina HOM05D000401 ORTHO05D000252 2.4e-06 56.6 148 35.1
FvH4_6g10140 Fragaria vesca HOM05D000401 ORTHO05D000252 2.4e-06 56.6 116 38.8
PGR004G1085 Punica granatum HOM05D000401 ORTHO05D000252 2.4e-06 56.6 116 39.7
BraA05t20429Z Brassica rapa HOM05D000401 ORTHO05D000252 3.1e-06 56.2 104 40.4
TWI77G0627 Tripterygium wilfordii HOM05D000401 ORTHO05D000252 3.1e-06 56.2 161 34.2
Oeu057994.1 Olea europaea HOM05D000401 ORTHO05D000252 4.1e-06 55.8 80 46.2
MSTRG.12705 Avicennia marina HOM05D000401 ORTHO05D000252 5.4e-06 55.5 109 38.5
VMungo1383G3319 Vigna mungo HOM05D000401 ORTHO05D000252 5.4e-06 55.5 195 32.3
Ah.08g215470 Amaranthus hybridus HOM05D000401 ORTHO05D000252 7.0e-06 55.1 178 33.1
Cfa017057 Carpinus fangiana HOM05D000401 ORTHO05D000252 7.0e-06 55.1 192 29.2


User provided reference genes

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