Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr5.44 Acer truncatum HOM05D005488 ORTHO05D006568 2.9e-70 268.5 137 100.0
Atru.chr5.75 Acer truncatum HOM05D005488 ORTHO05D006568 4.6e-68 261.2 137 97.8
Ciclev10022799m.g Citrus clementina HOM05D005488 ORTHO05D006568 3.5e-52 208.4 137 74.5
CiPaw.14G016900 Carya illinoinensis HOM05D005488 ORTHO05D006568 4.6e-52 208.0 138 76.8
MD07G1091300 Malus domestica HOM05D005488 ORTHO05D006568 4.6e-52 208.0 137 74.5
Potri.014G044300 Populus trichocarpa HOM05D005488 ORTHO05D006568 6.0e-52 207.6 139 74.8
Cfa011024 Carpinus fangiana HOM05D005488 ORTHO05D006568 7.9e-52 207.2 137 74.5
AL5G42420 Arabidopsis lyrata HOM05D005488 ORTHO05D006568 8.7e-51 203.8 138 73.9
MD02G1223400 Malus domestica HOM05D005488 ORTHO05D006568 8.7e-51 203.8 137 74.5
Nn6g33696 Nelumbo nucifera HOM05D005488 ORTHO05D006568 8.7e-51 203.8 137 73.0
Haze_02901 Corylus avellana HOM05D005488 ORTHO05D006568 1.1e-50 203.4 134 73.9
Eucgr.D01184 Eucalyptus grandis HOM05D005488 ORTHO05D006568 1.1e-50 203.4 137 77.4
Prupe.2G116500 Prunus persica HOM05D005488 ORTHO05D006568 1.5e-50 203.0 138 76.1
AT3G60210 Arabidopsis thaliana HOM05D005488 ORTHO05D006568 3.3e-50 201.8 139 74.1
Carub.0005s2695 Capsella rubella HOM05D005488 ORTHO05D006568 3.3e-50 201.8 138 75.4
CiPaw.13G022100 Carya illinoinensis HOM05D005488 ORTHO05D006568 3.3e-50 201.8 137 73.0
AUR62013788 Chenopodium quinoa HOM05D005488 ORTHO05D006568 4.3e-50 201.4 139 74.8
Solyc01g088610.4 Solanum lycopersicum HOM05D005488 ORTHO05D006568 4.3e-50 201.4 137 73.7
GSVIVG01018352001 Vitis vinifera HOM05D005488 ORTHO05D006568 5.7e-50 201.1 137 73.7
Manes.05G058400 Manihot esculenta HOM05D005488 ORTHO05D006568 9.7e-50 200.3 137 73.7
RcHm_v2.0_Chr1g0344251 Rosa chinensis HOM05D005488 ORTHO05D006568 9.7e-50 200.3 137 73.0
Sopen01g035460 Solanum pennellii HOM05D005488 ORTHO05D006568 1.3e-49 199.9 137 73.0
FvH4_7g08830 Fragaria vesca HOM05D005488 ORTHO05D006568 2.8e-49 198.7 138 74.6
FAN06G3564 Fragaria x ananassa HOM05D005488 ORTHO05D006568 2.8e-49 198.7 138 74.6
PGSC0003DMG400001718 Solanum tuberosum HOM05D005488 ORTHO05D006568 3.7e-49 198.4 137 72.3
Aa31LG1G26190 Aethionema arabicum HOM05D005488 ORTHO05D006568 4.8e-49 198.0 138 72.5
Sc26g0001760 Simmondsia chinensis HOM05D005488 ORTHO05D006568 6.3e-49 197.6 138 74.6
AUR62023368 Chenopodium quinoa HOM05D005488 ORTHO05D006568 8.2e-49 197.2 139 73.4
Aqoxy3G02564 Aquilegia oxysepala HOM05D005488 ORTHO05D006568 1.1e-48 196.8 136 72.1
FAN01G0908 Fragaria x ananassa HOM05D005488 ORTHO05D006568 1.8e-48 196.1 137 72.3
Oeu012019.1 Olea europaea HOM05D002442 ORTHO05D006568 1.8e-48 196.1 137 71.5
CANSAT25G0013 Cannabis sativa HOM05D005488 ORTHO05D006568 2.4e-48 195.7 138 71.7
CAN.G756.18 Capsicum annuum HOM05D005488 ORTHO05D006568 3.1e-48 195.3 137 70.8
TWI23G0236 Tripterygium wilfordii HOM05D005488 ORTHO05D006568 3.1e-48 195.3 138 73.9
EL10Ac1g00715 Beta vulgaris HOM05D005488 ORTHO05D006568 5.3e-48 194.5 139 73.4
FAN03G1834 Fragaria x ananassa HOM05D005488 ORTHO05D006568 5.3e-48 194.5 137 73.0
FAN10G0732 Fragaria x ananassa HOM05D005488 ORTHO05D006568 6.9e-48 194.1 137 72.3
Peaxi162Scf00745g00015 Petunia axillaris HOM05D005488 ORTHO05D006568 6.9e-48 194.1 138 71.0
Lj3g0015162 Lotus japonicus HOM05D005488 ORTHO05D006568 9.0e-48 193.7 139 69.8
PSO782G2409 Papaver somniferum HOM05D005488 ORTHO05D006568 9.0e-48 193.7 137 70.8
TWI14G1396 Tripterygium wilfordii HOM05D005488 ORTHO05D006568 9.0e-48 193.7 138 72.5
Nitab4.5_0004088g0020 Nicotiana tabacum HOM05D005488 ORTHO05D006568 1.2e-47 193.4 137 70.1
PSO063G2958 Papaver somniferum HOM05D005488 ORTHO05D006568 1.2e-47 193.4 137 70.8
FAN10G4236 Fragaria x ananassa HOM05D005488 ORTHO05D006568 1.5e-47 193.0 137 72.3
Nitab4.5_0005064g0040 Nicotiana tabacum HOM05D005488 ORTHO05D006568 2.0e-47 192.6 137 70.1
Oeu034855.1 Olea europaea HOM05D005488 ORTHO05D006568 2.0e-47 192.6 137 70.1
Gohir.D08G161700 Gossypium hirsutum HOM05D005488 ORTHO05D006568 2.6e-47 192.2 137 70.1
Gohir.A08G140700 Gossypium hirsutum HOM05D005488 ORTHO05D006568 3.4e-47 191.8 137 69.3
AL4G43700 Arabidopsis lyrata HOM05D005488 ORTHO05D006568 4.5e-47 191.4 139 71.9
THA.LOC104827584 Tarenaya hassleriana HOM05D005488 ORTHO05D006568 1.7e-46 189.5 137 70.8
PGR042G2970 Punica granatum HOM05D005488 ORTHO05D006568 2.2e-46 189.1 138 73.2
DCAR_025027 Daucus carota HOM05D005488 ORTHO05D006568 3.8e-46 188.3 137 67.2
COL.COLO4_12353 Corchorus olitorius HOM05D005488 ORTHO05D006568 5.0e-46 188.0 137 67.9
MSTRG.17108 Avicennia marina HOM05D005488 ORTHO05D006568 6.5e-46 187.6 137 65.0
Gorai.004G168100 Gossypium raimondii HOM05D005488 ORTHO05D006568 1.4e-45 186.4 138 68.8
CSS0036750 Camellia sinensis var. sinensis HOM05D005488 ORTHO05D006568 1.9e-45 186.0 138 68.8
Thecc.01G402400 Theobroma cacao HOM05D005488 ORTHO05D006568 1.9e-45 186.0 137 67.2
Carub.0004s2720 Capsella rubella HOM05D005488 ORTHO05D006568 2.5e-45 185.7 139 70.5
Hund17125 Selenicereus undatus HOM05D005488 ORTHO05D006568 2.5e-45 185.7 135 65.9
AT2G44650 Arabidopsis thaliana HOM05D005488 ORTHO05D006568 4.2e-45 184.9 140 70.0
Thhalv10001677m.g Eutrema salsugineum HOM05D005488 ORTHO05D006568 9.4e-45 183.7 140 68.6
MELO3C006268.2 Cucumis melo HOM05D005488 ORTHO05D006568 1.6e-44 183.0 141 66.7
Medtr8g009280 Medicago truncatula HOM05D005488 ORTHO05D006568 2.1e-44 182.6 138 66.7
Sp4g26730 Schrenkiella parvula HOM05D005488 ORTHO05D006568 2.1e-44 182.6 139 67.6
BcaB02g08840 Brassica carinata HOM05D005488 ORTHO05D006568 6.1e-44 181.0 138 67.4
ClCG05G002900 Citrullus lanatus HOM05D005488 ORTHO05D006568 1.0e-43 180.3 139 66.2
BraA05t19455Z Brassica rapa HOM05D005488 ORTHO05D006568 1.4e-43 179.9 137 68.6
CARHR139860 Cardamine hirsuta HOM05D005488 ORTHO05D006568 1.4e-43 179.9 139 69.1
BcaC02g12287 Brassica carinata HOM05D005488 ORTHO05D006568 2.3e-43 179.1 137 67.2
C04p05600 Brassica napus HOM05D005488 ORTHO05D006568 2.3e-43 179.1 137 67.2
BolC4t22190H Brassica oleracea HOM05D005488 ORTHO05D006568 2.3e-43 179.1 137 67.2
BcaC02g07105 Brassica carinata HOM05D005488 ORTHO05D006568 3.0e-43 178.7 138 67.4
BraA04t18803Z Brassica rapa HOM05D005488 ORTHO05D006568 3.0e-43 178.7 138 67.4
Psat0s4427g0080 Pisum sativum HOM05D005488 ORTHO05D006568 3.0e-43 178.7 137 65.0
Actinidia21613 Actinidia chinensis HOM05D005488 ORTHO05D006568 5.1e-43 177.9 140 65.0
arahy.Tifrunner.gnm1.ann1.L23YUH Arachis hypogaea HOM05D005488 ORTHO05D006568 6.7e-43 177.6 139 66.2
arahy.Tifrunner.gnm1.ann1.LT98XL Arachis hypogaea HOM05D005488 ORTHO05D006568 6.7e-43 177.6 139 66.2
BolC4t28620H Brassica oleracea HOM05D005488 ORTHO05D006568 6.7e-43 177.6 138 67.4
Duzib138G1174 Durio zibethinus HOM05D005488 ORTHO05D006568 6.7e-43 177.6 137 63.5
Ca_23141_v3 Cicer arietinum L. HOM05D005488 ORTHO05D006568 8.8e-43 177.2 138 63.8
Phvul.010G041700 Phaseolus vulgaris HOM05D005488 ORTHO05D006568 1.1e-42 176.8 137 64.2
A05p04790 Brassica napus HOM05D005488 ORTHO05D006568 2.0e-42 176.0 137 66.4
Cc02_g25610 Coffea canephora HOM05D005488 ORTHO05D006568 2.5e-42 175.6 140 65.7
CsaV3_3G010440 Cucumis sativus L. HOM05D005488 ORTHO05D006568 2.5e-42 175.6 141 64.5
Glyma.03G103600 Glycine max HOM05D005488 ORTHO05D006568 5.7e-42 174.5 137 63.5
unitig_26.g8858 Utricularia gibba HOM05D005488 ORTHO05D006568 9.7e-42 173.7 137 62.0
SGA_v2.0_scaffold52G19266 Striga asiatica HOM05D005488 ORTHO05D006568 1.3e-41 173.3 137 62.0
HanXRQChr16g0522961 Helianthus annuus HOM05D005488 ORTHO05D006568 1.7e-41 172.9 142 64.1
SalBow5G2779 Salvia bowleyana HOM05D005488 ORTHO05D006568 2.2e-41 172.6 138 65.2
Lsat_1_v5_gn_4_38520 Lactuca sativa HOM05D005488 ORTHO05D006568 2.8e-41 172.2 138 62.3
Sed0025787 Sechium edule HOM05D005488 ORTHO05D006568 3.7e-41 171.8 139 62.6
Cpa.g.sc52.71 Carica papaya HOM05D005488 ORTHO05D006568 4.8e-41 171.4 127 70.1
ECA234G4156 Erigeron canadensis HOM05D005488 ORTHO05D006568 1.1e-40 170.2 140 62.1
Lalb_Chr19g0126481 Lupinus albus HOM05D005488 ORTHO05D006568 1.1e-40 170.2 140 62.1
ATR0665G403 Amborella trichopoda HOM05D005488 ORTHO05D006568 1.4e-40 169.9 132 65.2
BcaB06g29391 Brassica carinata HOM05D005488 ORTHO05D006568 1.4e-40 169.9 130 66.9
CSS0010758 Camellia sinensis var. sinensis HOM05D005488 ORTHO05D006568 1.8e-40 169.5 138 63.0
ClCG06G000860 Citrullus lanatus HOM05D005488 ORTHO05D006568 2.4e-40 169.1 137 64.2
Lalb_Chr03g0040501 Lupinus albus HOM05D005488 ORTHO05D006568 6.9e-40 167.5 137 62.8
CDE12G0168 Ceratophyllum demersum HOM05D005488 ORTHO05D006568 1.2e-39 166.8 143 61.5
Migut.N01716 Erythranthe guttata HOM05D005488 ORTHO05D006568 1.2e-39 166.8 136 62.5
CSS0012976 Camellia sinensis var. sinensis HOM05D005488 ORTHO05D006568 7.7e-39 164.1 140 61.4
CDE04G3246 Ceratophyllum demersum HOM05D005488 ORTHO05D006568 1.0e-38 163.7 143 59.4
Migut.B01488 Erythranthe guttata HOM05D005488 ORTHO05D006568 2.9e-38 162.2 138 63.8
Sabra02G0105500 Salix brachista HOM05D005488 ORTHO05D006568 6.5e-38 161.0 120 71.7
MELO3C022455.2 Cucumis melo HOM05D005488 ORTHO05D006568 1.4e-37 159.8 156 57.7
VMungo0331G0633 Vigna mungo HOM05D005488 ORTHO05D006568 1.4e-37 159.8 104 71.2
Sed0000336 Sechium edule HOM05D005488 ORTHO05D006568 1.9e-37 159.5 137 63.5
CsaV3_6G006710 Cucumis sativus L. HOM05D005488 ORTHO05D001261 3.2e-37 158.7 127 64.6
unitig_750.g28406 Utricularia gibba HOM05D005488 ORTHO05D006568 3.2e-37 158.7 137 57.7
A04p33420 Brassica napus HOM05D005488 ORTHO05D006568 5.5e-37 157.9 138 60.1
vmacro21078 Vaccinium macrocarpon HOM05D005488 ORTHO05D006568 5.5e-37 157.9 169 52.7
C04p71170 Brassica napus HOM05D005488 ORTHO05D006568 7.9e-36 154.1 144 59.0
TPR.G17350 Trifolium pratense HOM05D005488 ORTHO05D006568 1.0e-35 153.7 107 66.4
Os10g0566700 Oryza sativa ssp. japonica HOM05D005488 ORTHO05D006568 1.4e-35 153.3 103 70.9
Rhsim01G0143400 Rhododendron simsii HOM05D005488 ORTHO05D006568 1.8e-35 152.9 116 67.2
Potri.002G135700 Populus trichocarpa HOM05D005488 ORTHO05D006568 1.5e-34 149.8 100 73.0
Zm00001eb390720 Zea mays HOM05D005488 ORTHO05D006568 1.5e-34 149.8 127 60.6
Zm00001eb024030 Zea mays HOM05D005488 ORTHO05D006568 2.8e-33 145.6 128 61.7
Dinv44023 Davidia involucrata HOM05D005488 ORTHO05D006568 3.7e-33 145.2 99 72.7
SEGI_24977 Sequoiadendron giganteum HOM05D005488 ORTHO05D006568 7.0e-32 141.0 136 58.1
Duzib133G1397 Durio zibethinus HOM05D005488 ORTHO05D006568 4.2e-29 131.7 109 66.1
SMO244G0054 Selaginella moellendorffii HOM05D005488 ORTHO05D006568 1.2e-28 130.2 89 68.5
HPP92_025708 Vanilla planifolia HOM05D005488 ORTHO05D006568 6.1e-28 127.9 89 67.4
MD13G1240800 Malus domestica HOM05D005488 ORTHO05D006568 1.8e-27 126.3 107 62.6
Dinv43589 Davidia involucrata HOM05D005488 ORTHO05D006568 3.9e-27 125.2 89 70.8
Sabra14G0032200 Salix brachista HOM05D005488 ORTHO05D006568 3.9e-27 125.2 195 43.1
AagrBONN_evm.TU.Sc2ySwM_117.3656 Anthoceros agrestis HOM05D005488 ORTHO05D006568 6.7e-27 124.4 106 55.7
QL04p026246 Quercus lobata HOM05D005488 ORTHO05D006568 4.4e-26 121.7 70 81.4
Mapoly0181s0002 Marchantia polymorpha HOM05D005488 ORTHO05D006568 2.8e-25 119.0 103 57.3
Zm00001eb071630 Zea mays HOM05D005488 ORTHO05D006568 4.5e-23 111.7 83 66.3
Pp3c2_19170 Physcomitrium patens HOM05D005488 ORTHO05D006568 2.2e-22 109.4 96 49.0
Glyma.07G120400 Glycine max HOM05D005488 ORTHO05D006568 8.5e-22 107.5 88 62.5
Pp3c1_20880 Physcomitrium patens HOM05D005488 ORTHO05D006568 1.1e-21 107.1 135 40.7
Gohir.D07G176200 Gossypium hirsutum HOM05D005488 ORTHO05D006568 3.0e-19 99.0 74 64.9
Phvul.006G055900 Phaseolus vulgaris HOM05D005488 ORTHO05D006568 1.5e-18 96.7 88 58.0
QL04p026254 Quercus lobata HOM05D005488 ORTHO05D006568 2.7e-15 85.9 69 62.3
Gorai.007G266500 Gossypium raimondii HOM05D005488 ORTHO05D006568 1.9e-13 79.7 65 58.5
Rhsim03G0098500 Rhododendron simsii HOM05D005488 ORTHO05D006568 8.8e-11 70.9 55 63.6
MD00G1150500 Malus domestica HOM05D005488 ORTHO05D006568 1.7e-09 66.6 37 83.8
Lj4g0026142 Lotus japonicus HOM05D002686 ORTHO05D003222 2.2e-09 66.2 152 32.2
EL10Ac8g19011 Beta vulgaris HOM05D002686 ORTHO05D003222 2.8e-09 65.9 152 32.2
Ah.09g229170 Amaranthus hybridus HOM05D002686 ORTHO05D003222 4.1e-08 62.0 148 33.1
AUR62028287 Chenopodium quinoa HOM05D002686 ORTHO05D003222 2.7e-07 59.3 147 29.3
ATR0681G200 Amborella trichopoda HOM05D002686 ORTHO05D003222 5.9e-07 58.2 151 29.8
AUR62025283 Chenopodium quinoa HOM05D002686 ORTHO05D003222 7.7e-07 57.8 126 30.2
MBI19_g29882_MAGBIO Magnolia biondii HOM05D002686 ORTHO05D003222 7.7e-07 57.8 150 29.3
THA.LOC104799611 Tarenaya hassleriana HOM05D002686 ORTHO05D003222 7.7e-07 57.8 156 28.8
COL.COLO4_21229 Corchorus olitorius HOM05D002686 ORTHO05D003222 1.0e-06 57.4 134 34.3
arahy.Tifrunner.gnm1.ann1.XRWK6U Arachis hypogaea HOM05D002686 ORTHO05D003222 1.7e-06 56.6 152 28.9
arahy.Tifrunner.gnm1.ann1.Y01VEH Arachis hypogaea HOM05D005669 ORTHO05D007632 1.7e-06 56.6 145 31.0
Lalb_Chr13g0299321 Lupinus albus HOM05D002686 ORTHO05D003222 1.7e-06 56.6 136 30.9
ECA248G0213 Erigeron canadensis HOM05D002686 ORTHO05D003222 2.3e-06 56.2 129 34.9
TAR468G0008 Trochodendron aralioides HOM05D002686 ORTHO05D003222 2.3e-06 56.2 156 30.1
arahy.Tifrunner.gnm1.ann1.5TSI9H Arachis hypogaea HOM05D002686 ORTHO05D003222 2.9e-06 55.8 146 29.5
CAN.G1661.28 Capsicum annuum HOM05D002686 ORTHO05D003222 2.9e-06 55.8 131 31.3
Ca_09316_v3 Cicer arietinum L. HOM05D002686 ORTHO05D003222 2.9e-06 55.8 95 35.8
arahy.Tifrunner.gnm1.ann1.7LZL5F Arachis hypogaea HOM05D005669 ORTHO05D007632 3.8e-06 55.5 147 29.3
SEGI_38857 Sequoiadendron giganteum HOM05D002686 ORTHO05D003222 3.8e-06 55.5 104 33.7
TWI63G0210 Tripterygium wilfordii HOM05D002686 ORTHO05D003222 3.8e-06 55.5 135 33.3
Aa31LG1G13960 Aethionema arabicum HOM05D002686 ORTHO05D003222 5.0e-06 55.1 123 31.7
Ah.14g084810 Amaranthus hybridus HOM05D002686 ORTHO05D003222 5.0e-06 55.1 150 31.3
Ciclev10009281m.g Citrus clementina HOM05D002686 ORTHO05D003222 5.0e-06 55.1 152 28.3
Lj7A689T77 Lonicera japonica HOM05D002686 ORTHO05D003222 5.0e-06 55.1 105 36.2
VMungo1215G1076 Vigna mungo HOM05D002686 ORTHO05D003222 5.0e-06 55.1 131 32.1
Dinv25529 Davidia involucrata HOM05D002686 ORTHO05D003222 6.6e-06 54.7 150 29.3
Glyma.15G180900 Glycine max HOM05D002686 ORTHO05D003222 6.6e-06 54.7 133 31.6
Sabra06G0108500 Salix brachista HOM05D002686 ORTHO05D003222 6.6e-06 54.7 104 34.6
SGA_v2.0_scaffold296G47568 Striga asiatica HOM05D002686 ORTHO05D003222 6.6e-06 54.7 139 31.7
TAR624G0668 Trochodendron aralioides HOM05D002686 ORTHO05D003222 6.6e-06 54.7 156 30.1
Ah.06g187790 Amaranthus hybridus HOM05D002686 ORTHO05D003222 8.6e-06 54.3 126 27.0
CDE07G1931 Ceratophyllum demersum HOM05D002686 ORTHO05D003222 8.6e-06 54.3 151 27.8
Duzib150G0982 Durio zibethinus HOM05D002686 ORTHO05D003222 8.6e-06 54.3 134 32.1
Duzib187G0525 Durio zibethinus HOM05D002686 ORTHO05D003222 8.6e-06 54.3 134 30.6
Lalb_Chr12g0200301 Lupinus albus HOM05D002686 ORTHO05D003222 8.6e-06 54.3 131 29.0
MD15G1221300 Malus domestica HOM05D002686 ORTHO05D003222 8.6e-06 54.3 121 33.1
TPR.G12514 Trifolium pratense HOM05D002686 ORTHO05D003222 8.6e-06 54.3 144 30.6


User provided reference genes

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