Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr5.403 Acer truncatum HOM05D006418 ORTHO05D008063 2.7e-174 615.1 292 100.0
Duzib138G1515 Durio zibethinus HOM05D006418 ORTHO05D008063 2.1e-142 509.2 275 86.2
GSVIVG01027527001 Vitis vinifera HOM05D006418 ORTHO05D008063 5.1e-141 504.6 275 85.5
Manes.01G262400 Manihot esculenta HOM05D006418 ORTHO05D008063 7.4e-140 500.7 277 84.8
Ciclev10021113m.g Citrus clementina HOM05D006418 ORTHO05D008063 9.0e-138 493.8 275 86.5
Potri.002G153100 Populus trichocarpa HOM05D006418 ORTHO05D008063 5.8e-137 491.1 276 83.7
Gorai.007G095100 Gossypium raimondii HOM05D006418 ORTHO05D008063 7.6e-137 490.7 275 82.5
MD07G1128500 Malus domestica HOM05D006418 ORTHO05D008063 1.0e-136 490.3 276 82.2
TAR375G0873 Trochodendron aralioides HOM05D006418 ORTHO05D008063 1.7e-136 489.6 277 83.8
Thecc.01G368600 Theobroma cacao HOM05D006418 ORTHO05D008063 2.2e-136 489.2 275 84.0
Gohir.D11G089100 Gossypium hirsutum HOM05D006418 ORTHO05D008063 6.5e-136 487.6 275 82.2
Actinidia38288 Actinidia chinensis HOM05D006418 ORTHO05D008063 1.1e-135 486.9 271 84.1
COL.COLO4_12625 Corchorus olitorius HOM05D006418 ORTHO05D008063 1.9e-135 486.1 275 81.1
Sabra02G0121400 Salix brachista HOM05D006418 ORTHO05D008063 2.7e-134 482.3 276 82.2
Eucgr.E00217 Eucalyptus grandis HOM05D006418 ORTHO05D008063 3.5e-134 481.9 278 78.8
Nn1g01350 Nelumbo nucifera HOM05D006418 ORTHO05D008063 3.0e-133 478.8 280 80.7
CiPaw.01G053600 Carya illinoinensis HOM05D006418 ORTHO05D008063 6.7e-133 477.6 275 81.1
FAN10G2923 Fragaria x ananassa HOM05D006418 ORTHO05D008063 6.7e-133 477.6 274 79.9
FAN01G2003 Fragaria x ananassa HOM05D006418 ORTHO05D008063 8.7e-133 477.2 274 79.2
FvH4_7g13130 Fragaria vesca HOM05D006418 ORTHO05D008063 1.9e-132 476.1 274 79.6
FAN06G0540 Fragaria x ananassa HOM05D006418 ORTHO05D008063 1.9e-132 476.1 274 79.6
FAN06G3976 Fragaria x ananassa HOM05D006418 ORTHO05D008063 1.9e-132 476.1 274 79.6
Glyma.03G017600 Glycine max HOM05D006418 ORTHO05D008063 2.5e-132 475.7 277 79.4
TWI59G1449 Tripterygium wilfordii HOM05D006418 ORTHO05D008063 5.7e-132 474.6 269 82.9
FAN03G2411 Fragaria x ananassa HOM05D006418 ORTHO05D008063 1.6e-131 473.0 274 78.8
TPR.G17586 Trifolium pratense HOM05D006418 ORTHO05D008063 8.2e-131 470.7 255 83.1
Aqoxy5G03975 Aquilegia oxysepala HOM05D006418 ORTHO05D008063 1.4e-130 469.9 269 82.2
Nitab4.5_0010430g0060 Nicotiana tabacum HOM05D006418 ORTHO05D008063 2.4e-130 469.2 279 79.9
THA.LOC104827683 Tarenaya hassleriana HOM05D006418 ORTHO05D008063 2.4e-130 469.2 268 81.3
CSS0035566 Camellia sinensis var. sinensis HOM05D006418 ORTHO05D008063 4.5e-129 464.9 248 84.3
vmacro13338 Vaccinium macrocarpon HOM05D006418 ORTHO05D008063 5.9e-129 464.5 248 85.1
CANSAT56G2190 Cannabis sativa HOM05D006418 ORTHO05D008063 1.0e-128 463.8 278 79.1
RcHm_v2.0_Chr1g0352261 Rosa chinensis HOM05D006418 ORTHO05D008063 1.3e-128 463.4 271 77.9
Lj3g0006580 Lotus japonicus HOM05D006418 ORTHO05D008063 1.7e-128 463.0 269 78.1
Cc02_g37230 Coffea canephora HOM05D006418 ORTHO05D008063 2.2e-128 462.6 278 77.3
Hma1.2p1_0033F.1_g020630 Hydrangea macrophylla HOM05D006418 ORTHO05D008063 2.2e-128 462.6 241 86.3
Dinv32422 Davidia involucrata HOM05D006418 ORTHO05D008063 5.0e-128 461.5 238 87.4
arahy.Tifrunner.gnm1.ann1.K1NG1D Arachis hypogaea HOM05D006418 ORTHO05D008063 1.1e-127 460.3 274 77.7
Rhsim07G0021100 Rhododendron simsii HOM05D006418 ORTHO05D008063 1.1e-127 460.3 277 78.7
Peaxi162Scf00021g00525 Petunia axillaris HOM05D006418 ORTHO05D008063 1.4e-127 459.9 272 79.0
QL08p050652 Quercus lobata HOM05D006418 ORTHO05D008063 2.5e-127 459.1 260 84.2
PGSC0003DMG400017054 Solanum tuberosum HOM05D006418 ORTHO05D008063 5.5e-127 458.0 278 77.3
CAN.G170.50 Capsicum annuum HOM05D006418 ORTHO05D008063 7.2e-127 457.6 270 80.0
ClCG05G001910 Citrullus lanatus HOM05D006418 ORTHO05D008063 7.2e-127 457.6 253 83.0
Psat4g151800 Pisum sativum HOM05D006418 ORTHO05D008063 7.2e-127 457.6 266 78.6
Lj7A519G38 Lonicera japonica HOM05D006418 ORTHO05D008063 1.2e-126 456.8 241 86.7
CiPaw.01G023800 Carya illinoinensis HOM05D006418 ORTHO05D008063 2.7e-126 455.7 277 77.6
Sopen01g037560 Solanum pennellii HOM05D006418 ORTHO05D008063 3.6e-126 455.3 272 78.3
Aa31LG10G15180 Aethionema arabicum HOM05D006418 ORTHO05D008063 6.1e-126 454.5 274 77.0
Cfa004182 Carpinus fangiana HOM05D006418 ORTHO05D008063 6.1e-126 454.5 238 85.7
Ca_23755_v3 Cicer arietinum L. HOM05D006418 ORTHO05D008063 1.8e-125 453.0 267 79.0
Solyc01g091780.4 Solanum lycopersicum HOM05D006418 ORTHO05D008063 1.8e-125 453.0 272 77.9
PGR042G1311 Punica granatum HOM05D006418 ORTHO05D008063 5.1e-125 451.4 267 78.7
Nitab4.5_0004550g0130 Nicotiana tabacum HOM05D006418 ORTHO05D008063 1.1e-124 450.3 289 76.5
EL10Ac1g00963 Beta vulgaris HOM05D006418 ORTHO05D008063 3.3e-124 448.7 265 79.6
Lalb_Chr10g0097531 Lupinus albus HOM05D006418 ORTHO05D008063 3.3e-124 448.7 263 79.1
Migut.B01688 Erythranthe guttata HOM05D006418 ORTHO05D008063 7.4e-124 447.6 281 75.1
AT3G61080 Arabidopsis thaliana HOM05D006418 ORTHO05D008063 9.7e-124 447.2 265 77.7
Medtr8g032700 Medicago truncatula HOM05D006418 ORTHO05D008063 9.7e-124 447.2 267 78.3
VMungo0331G0376 Vigna mungo HOM05D006418 ORTHO05D008063 1.3e-123 446.8 268 77.2
AL5G43290 Arabidopsis lyrata HOM05D006418 ORTHO05D008063 1.1e-122 443.7 265 77.0
Hund27325 Selenicereus undatus HOM05D006418 ORTHO05D008063 1.4e-122 443.4 255 78.4
CARHR171390 Cardamine hirsuta HOM05D006418 ORTHO05D008063 1.8e-122 443.0 265 78.5
ECA236G1148 Erigeron canadensis HOM05D006418 ORTHO05D008063 1.8e-122 443.0 242 83.1
Thhalv10006098m.g Eutrema salsugineum HOM05D006418 ORTHO05D008063 3.1e-122 442.2 265 78.1
HanXRQChr06g0169031 Helianthus annuus HOM05D006418 ORTHO05D008063 3.1e-122 442.2 276 76.4
DCAR_025170 Daucus carota HOM05D006418 ORTHO05D008063 9.0e-122 440.7 249 81.5
CDE01G0065 Ceratophyllum demersum HOM05D006418 ORTHO05D008063 2.0e-121 439.5 243 82.7
Sp5g02280 Schrenkiella parvula HOM05D006418 ORTHO05D008063 2.0e-121 439.5 265 77.4
Phvul.010G092700 Phaseolus vulgaris HOM05D006418 ORTHO05D008063 1.0e-120 437.2 268 75.7
ATR0757G200 Amborella trichopoda HOM05D006418 ORTHO05D008063 1.7e-120 436.4 279 73.5
Carub.0005s2773 Capsella rubella HOM05D006418 ORTHO05D008063 2.9e-120 435.6 265 77.7
AUR62004291 Chenopodium quinoa HOM05D006418 ORTHO05D008063 5.0e-120 434.9 241 81.7
PSO063G7157 Papaver somniferum HOM05D006418 ORTHO05D008063 5.0e-120 434.9 266 74.8
BcaB02g07390 Brassica carinata HOM05D006418 ORTHO05D008063 9.4e-119 430.6 265 77.0
Oeu024416.1 Olea europaea HOM05D006418 ORTHO05D008063 9.4e-119 430.6 282 73.4
Cpa.g.sc18.197 Carica papaya HOM05D006418 ORTHO05D008063 2.7e-118 429.1 252 80.6
BcaC08g45098 Brassica carinata HOM05D006418 ORTHO05D008063 3.0e-117 425.6 265 75.8
HPP92_014577 Vanilla planifolia HOM05D006418 ORTHO05D008063 3.9e-117 425.2 263 73.4
MELO3C006151.2 Cucumis melo HOM05D006418 ORTHO05D008063 2.0e-116 422.9 301 69.1
C06p27060 Brassica napus HOM05D006418 ORTHO05D008063 3.7e-115 418.7 272 73.9
BolC6t37878H Brassica oleracea HOM05D006418 ORTHO05D008063 3.7e-115 418.7 272 73.9
Zm00001eb001200 Zea mays HOM05D006418 ORTHO05D008063 3.7e-115 418.7 241 78.8
BraA07t30173Z Brassica rapa HOM05D006418 ORTHO05D008063 4.8e-115 418.3 272 73.9
A07p25300 Brassica napus HOM05D006418 ORTHO05D008063 8.2e-115 417.5 272 73.9
SalBow3G2367 Salvia bowleyana HOM05D006418 ORTHO05D008063 2.6e-113 412.5 273 72.2
Os03g0117800 Oryza sativa ssp. japonica HOM05D006418 ORTHO05D008063 4.5e-113 411.8 241 77.6
MBI12_g25033_MAGBIO Magnolia biondii HOM05D006418 ORTHO05D008063 6.1e-102 374.8 256 71.1
Mapoly0138s0005 Marchantia polymorpha HOM05D006418 ORTHO05D008063 9.1e-98 360.9 277 61.4
SGA_v2.0_scaffold95G28870 Striga asiatica HOM05D006418 ORTHO05D008063 4.5e-97 358.6 294 63.9
AagrBONN_evm.TU.Sc2ySwM_344.2134 Anthoceros agrestis HOM05D006418 ORTHO05D008063 6.5e-96 354.8 238 67.6
Prupe.2G154600 Prunus persica HOM05D006418 ORTHO05D008063 1.1e-95 354.0 184 85.3
Pp3c15_5030 Physcomitrium patens HOM05D006418 ORTHO05D008063 3.2e-95 352.4 272 61.0
CBR_g38943 Chara braunii HOM05D006418 ORTHO05D008063 9.4e-95 350.9 243 65.4
CsaV3_3G009310 Cucumis sativus L. HOM05D006418 ORTHO05D008063 1.6e-94 350.1 184 84.2
Hma1.2p1_0033F.1_g020640 Hydrangea macrophylla HOM05D006418 ORTHO05D008063 2.1e-94 349.7 257 67.3
Sed0024588 Sechium edule HOM05D006418 ORTHO05D008063 8.8e-93 344.4 184 82.6
SMO356G0133 Selaginella moellendorffii HOM05D006418 ORTHO05D008063 2.2e-91 339.7 235 64.7
Lsat_1_v5_gn_7_8501 Lactuca sativa HOM05D006418 ORTHO05D008063 2.8e-91 339.3 206 76.2
SEGI_14549 Sequoiadendron giganteum HOM05D006418 ORTHO05D008063 1.6e-73 280.4 170 74.1
unitig_22.g5367 Utricularia gibba HOM05D006418 ORTHO05D008063 1.6e-73 280.4 147 83.7
Cc02_g37660 Coffea canephora HOM05D006418 ORTHO05D008063 1.7e-67 260.4 151 77.5
arahy.Tifrunner.gnm1.ann1.N7AMXP Arachis hypogaea HOM05D006418 ORTHO05D008063 2.4e-66 256.5 170 72.4
Sc26g0001060 Simmondsia chinensis HOM05D001335 ORTHO05D001184 3.2e-66 256.1 185 67.0
FAN10G0301 Fragaria x ananassa HOM05D006418 ORTHO05D008063 1.2e-65 254.2 200 63.0
Gohir.A11G085000 Gossypium hirsutum HOM05D006418 ORTHO05D008063 4.6e-65 252.3 125 87.2
Haze_15226 Corylus avellana HOM05D006418 ORTHO05D008063 3.9e-64 249.2 137 83.9
Gohir.A11G084900 Gossypium hirsutum HOM05D006418 ORTHO05D008063 9.5e-55 218.0 132 78.0
Cre12.g542202 Chlamydomonas reinhardtii HOM05D006418 ORTHO05D008063 1.2e-52 211.1 237 47.7
MCO14G366 Micromonas commoda HOM05D006418 ORTHO05D008063 1.4e-50 204.1 243 45.3
Sabra14G0055300 Salix brachista HOM05D006418 ORTHO05D008063 1.9e-50 203.8 277 45.8
Glyma.07G078900 Glycine max HOM05D006418 ORTHO05D008063 3.0e-48 196.4 187 57.2
Sc26g0001070 Simmondsia chinensis HOM05D006418 ORTHO05D008063 4.4e-44 182.6 137 65.7
PRCOL_00000121 Prasinoderma coloniale HOM05D006418 ORTHO05D008063 1.1e-37 161.4 256 37.5
Pp3c1_6480 Physcomitrium patens HOM05D006418 ORTHO05D008063 9.6e-31 138.3 212 37.7
ATR0620G127 Amborella trichopoda HOM05D006418 ORTHO05D008063 2.6e-28 130.2 157 43.3
CiPaw.01G052800 Carya illinoinensis HOM05D006418 ORTHO05D008063 4.2e-26 122.9 86 70.9
Ca_28970_v3 Cicer arietinum L. HOM05D006418 ORTHO05D008063 7.1e-26 122.1 223 35.4
unitig_22.g5366 Utricularia gibba HOM05D003447 ORTHO05D003967 5.1e-24 115.9 97 64.9
Cfa024407 Carpinus fangiana HOM05D006418 ORTHO05D008063 1.6e-17 94.4 226 31.9
Cc00_g22860 Coffea canephora HOM05D006418 ORTHO05D008063 1.6e-17 94.4 57 75.4
SEGI_36912 Sequoiadendron giganteum HOM05D006418 ORTHO05D008063 3.1e-13 80.1 62 58.1
Actinidia27830 Actinidia chinensis HOM05D006418 ORTHO05D008063 3.4e-12 76.6 41 82.9
MBI16_g15528_MAGBIO Magnolia biondii HOM05D006418 ORTHO05D008063 8.5e-11 72.0 42 81.0
MBI11_g05318_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 7.4e-07 58.9 30 90.0


User provided reference genes

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