Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr5.3576 Acer truncatum HOM05D008002 ORTHO05D010148 1.3e-103 379.8 195 100.0
Thecc.02G147800 Theobroma cacao HOM05D008002 ORTHO05D010148 8.6e-60 234.2 205 60.5
Gohir.A04G111300 Gossypium hirsutum HOM05D008002 ORTHO05D010148 8.0e-58 227.6 204 57.8
Gohir.D02G193300 Gossypium hirsutum HOM05D008002 ORTHO05D010148 1.4e-57 226.9 207 60.4
Duzib132G1147 Durio zibethinus HOM05D008002 ORTHO05D010148 1.8e-57 226.5 213 57.3
MD05G1143100 Malus domestica HOM05D008002 ORTHO05D010148 2.3e-57 226.1 204 59.8
FAN15G1289 Fragaria x ananassa HOM05D008002 ORTHO05D010148 3.1e-57 225.7 207 57.0
Duzib248G0441 Durio zibethinus HOM05D008002 ORTHO05D010148 5.2e-57 224.9 207 57.0
Prupe.8G181900 Prunus persica HOM05D008002 ORTHO05D010148 5.2e-57 224.9 205 59.5
RcHm_v2.0_Chr6g0281201 Rosa chinensis HOM05D008002 ORTHO05D010148 1.2e-56 223.8 207 57.5
FvH4_2g17020 Fragaria vesca HOM05D008002 ORTHO05D010148 1.5e-56 223.4 207 57.0
Gorai.005G216100 Gossypium raimondii HOM05D008002 ORTHO05D010148 1.5e-56 223.4 208 59.1
FAN24G1487 Fragaria x ananassa HOM05D008002 ORTHO05D010148 2.6e-56 222.6 202 57.9
Gohir.A03G170200 Gossypium hirsutum HOM05D008002 ORTHO05D010148 2.6e-56 222.6 208 58.7
Gorai.012G138300 Gossypium raimondii HOM05D008002 ORTHO05D010148 2.6e-56 222.6 206 57.8
FAN27G2383 Fragaria x ananassa HOM05D008002 ORTHO05D010148 3.4e-56 222.2 207 56.5
MD10G1142900 Malus domestica HOM05D008002 ORTHO05D010148 7.5e-56 221.1 208 58.7
Potri.009G169400 Populus trichocarpa HOM05D008002 ORTHO05D010148 7.5e-56 221.1 191 59.7
Gohir.D04G151600 Gossypium hirsutum HOM05D008002 ORTHO05D010148 2.2e-55 219.5 206 57.8
Ciclev10029829m.g Citrus clementina HOM05D008002 ORTHO05D010148 1.9e-54 216.5 194 56.7
TAR376G1088 Trochodendron aralioides HOM05D008002 ORTHO05D010148 2.4e-54 216.1 194 58.2
Haze_01959 Corylus avellana HOM05D008002 ORTHO05D010148 7.0e-54 214.5 192 57.3
Eucgr.I01542 Eucalyptus grandis HOM05D008002 ORTHO05D010148 7.0e-54 214.5 208 54.8
CANSAT25G0111 Cannabis sativa HOM05D008002 ORTHO05D010148 9.2e-54 214.2 206 54.9
Dinv14183 Davidia involucrata HOM05D008002 ORTHO05D010148 7.8e-53 211.1 201 63.2
Potri.004G208200 Populus trichocarpa HOM05D008002 ORTHO05D010148 7.8e-53 211.1 195 55.9
CiPaw.05G094700 Carya illinoinensis HOM05D008002 ORTHO05D010148 1.7e-52 209.9 185 57.3
Hund00100 Selenicereus undatus HOM05D008002 ORTHO05D010148 3.0e-52 209.1 197 56.3
QL11p056798 Quercus lobata HOM05D000114 ORTHO05D009898 1.1e-51 207.2 222 50.0
Sabra04G0140100 Salix brachista HOM05D008002 ORTHO05D010148 4.3e-51 205.3 193 56.5
Actinidia17988 Actinidia chinensis HOM05D008002 ORTHO05D010148 5.6e-51 204.9 196 56.6
PGR142G3621 Punica granatum HOM05D008002 ORTHO05D010148 1.6e-50 203.4 209 56.9
Cfa005392 Carpinus fangiana HOM05D008002 ORTHO05D010148 3.6e-50 202.2 190 55.3
Actinidia20583 Actinidia chinensis HOM05D008002 ORTHO05D010148 6.2e-50 201.4 197 57.4
GSVIVG01023858001 Vitis vinifera HOM05D008002 ORTHO05D010148 6.2e-50 201.4 200 56.5
MELO3C015697.2 Cucumis melo HOM05D008002 ORTHO05D010148 4.0e-49 198.7 209 53.6
CsaV3_7G002100 Cucumis sativus L. HOM05D008002 ORTHO05D010148 5.2e-49 198.4 208 54.3
COL.COLO4_03847 Corchorus olitorius HOM05D008002 ORTHO05D010148 7.5e-48 194.5 215 52.1
Gohir.D13G057750 Gossypium hirsutum HOM05D008002 ORTHO05D010148 3.7e-47 192.2 212 50.5
Gorai.013G065000 Gossypium raimondii HOM05D008002 ORTHO05D010148 3.7e-47 192.2 212 50.0
TWI75G0824 Tripterygium wilfordii HOM05D008002 ORTHO05D010148 6.4e-47 191.4 217 48.4
Nn2g12628 Nelumbo nucifera HOM05D008002 ORTHO05D010148 8.3e-47 191.0 199 50.8
CiPaw.06G114200 Carya illinoinensis HOM05D008002 ORTHO05D010148 1.9e-46 189.9 195 51.3
Rhsim11G0198500 Rhododendron simsii HOM05D008002 ORTHO05D010148 1.2e-45 187.2 176 55.1
Sc08g0002060 Simmondsia chinensis HOM05D008002 ORTHO05D010148 3.5e-45 185.7 206 48.5
Nn8g40377 Nelumbo nucifera HOM05D008002 ORTHO05D010148 4.6e-45 185.3 198 51.5
Oeu006116.1 Olea europaea HOM05D008002 ORTHO05D010148 6.6e-44 181.4 208 45.7
Lsat_1_v5_gn_3_48401 Lactuca sativa HOM05D008002 ORTHO05D010148 1.1e-43 180.6 166 54.8
Sed0014792 Sechium edule HOM05D008002 ORTHO05D010148 1.1e-41 174.1 207 48.8
Haze_01969 Corylus avellana HOM05D008002 ORTHO05D010148 3.1e-41 172.6 182 50.5
Eucgr.H05000 Eucalyptus grandis HOM05D008002 ORTHO05D010148 5.2e-41 171.8 193 46.6
AT4G38213 Arabidopsis thaliana HOM05D008002 ORTHO05D010148 1.3e-39 167.2 190 50.0
Carub.0007s0013 Capsella rubella HOM05D008002 ORTHO05D010148 1.2e-37 160.6 156 51.3
Thhalv10027398m.g Eutrema salsugineum HOM05D008002 ORTHO05D010148 2.1e-37 159.8 189 45.5
Sp7g37530 Schrenkiella parvula HOM05D008002 ORTHO05D010148 1.0e-36 157.5 181 47.0
Aqoxy6G02976 Aquilegia oxysepala HOM05D008002 ORTHO05D010148 3.3e-35 152.5 236 41.9
PSO541G1248 Papaver somniferum HOM05D008002 ORTHO05D010148 1.8e-33 146.7 208 42.8
ClCG02G003270 Citrullus lanatus HOM05D008002 ORTHO05D010148 9.9e-32 141.0 193 47.2
CSS0003373 Camellia sinensis var. sinensis HOM05D008002 ORTHO05D010148 2.3e-28 129.8 111 60.4
SEGI_35818 Sequoiadendron giganteum HOM05D008002 ORTHO05D010148 2.3e-28 129.8 193 39.9
HanXRQChr15g0490081 Helianthus annuus HOM05D008002 ORTHO05D010148 1.6e-26 123.6 119 53.8
HPP92_007470 Vanilla planifolia HOM05D008002 ORTHO05D010148 1.4e-25 120.6 207 35.3
Zm00001eb035270 Zea mays HOM05D008002 ORTHO05D010148 2.4e-25 119.8 161 41.0
AL7G10120 Arabidopsis lyrata HOM05D008002 ORTHO05D010148 1.5e-24 117.1 169 45.6
CDE10G0514 Ceratophyllum demersum HOM05D008002 ORTHO05D010148 2.0e-24 116.7 168 39.3
HanXRQChr15g0479771 Helianthus annuus HOM05D008002 ORTHO05D010148 4.5e-24 115.5 116 52.6
CARHR293990 Cardamine hirsuta HOM05D008002 ORTHO05D010148 7.1e-22 108.2 160 42.5
PSO675G9248 Papaver somniferum HOM05D008002 ORTHO05D010148 1.2e-21 107.5 129 44.2
Os08g0512100 Oryza sativa ssp. japonica HOM05D008002 ORTHO05D010148 2.1e-21 106.7 172 36.6
MBI17_g13390_MAGBIO Magnolia biondii HOM05D008002 ORTHO05D010148 4.6e-21 105.5 103 52.4
ATR0763G180 Amborella trichopoda HOM05D008002 ORTHO05D010148 1.3e-20 104.0 119 47.1
TAR628G1479 Trochodendron aralioides HOM05D008002 ORTHO05D010148 3.7e-18 95.9 95 52.6
MBI01_g17256_MAGBIO Magnolia biondii HOM05D008002 ORTHO05D010148 6.2e-18 95.1 90 55.6
CDE10G0941 Ceratophyllum demersum HOM05D008002 ORTHO05D010148 1.1e-14 84.3 93 45.2
MBI12_g13710_MAGBIO Magnolia biondii HOM05D002560 ORTHO05D022477 1.1e-14 84.3 94 47.9
MBI03_g24838_MAGBIO Magnolia biondii HOM05D008002 ORTHO05D010148 2.4e-14 83.2 93 48.4
MBI18_g48147_MAGBIO Magnolia biondii HOM05D002560 ORTHO05D022477 6.0e-13 78.6 95 46.3
Gohir.A13G064166 Gossypium hirsutum HOM05D008002 ORTHO05D010148 7.4e-11 71.6 62 62.9
CSS0029866 Camellia sinensis var. sinensis HOM05D008403 ORTHO05D010317 1.8e-09 67.0 70 54.3


User provided reference genes

Program Settings