Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr5.3567 Acer truncatum HOM05D007297 ORTHO05D009352 3.9e-102 374.8 185 100.0
Dinv14179 Davidia involucrata HOM05D007297 ORTHO05D009352 1.0e-62 243.8 161 71.4
Ciclev10028691m.g Citrus clementina HOM05D007297 ORTHO05D009352 1.3e-60 236.9 163 70.6
CiPaw.05G093700 Carya illinoinensis HOM05D007297 ORTHO05D009352 2.8e-60 235.7 163 71.2
Potri.004G207400 Populus trichocarpa HOM05D007297 ORTHO05D009352 8.1e-60 234.2 161 70.2
MELO3C015706.2 Cucumis melo HOM05D007297 ORTHO05D009352 1.4e-59 233.4 162 66.7
CsaV3_7G002000 Cucumis sativus L. HOM05D007297 ORTHO05D009352 3.1e-59 232.3 162 66.7
CSS0008013 Camellia sinensis var. sinensis HOM05D007297 ORTHO05D009352 5.3e-59 231.5 159 69.2
ClCG02G003330 Citrullus lanatus HOM05D007297 ORTHO05D009352 9.0e-59 230.7 162 67.3
MD10G1142400 Malus domestica HOM05D007297 ORTHO05D009352 2.0e-58 229.6 161 66.5
Oeu032716.1 Olea europaea HOM05D007297 ORTHO05D009352 5.8e-58 228.0 159 67.9
Sed0028195 Sechium edule HOM05D007297 ORTHO05D009352 7.6e-58 227.6 158 66.5
RcHm_v2.0_Chr6g0281021 Rosa chinensis HOM05D007297 ORTHO05D009352 2.2e-57 226.1 163 66.3
TWI79G0145 Tripterygium wilfordii HOM05D007297 ORTHO05D009352 2.2e-57 226.1 163 66.3
Manes.15G114700 Manihot esculenta HOM05D007297 ORTHO05D009352 6.5e-57 224.6 163 68.7
vmacro23445 Vaccinium macrocarpon HOM05D007297 ORTHO05D009352 6.5e-57 224.6 162 64.8
Prupe.8G180900 Prunus persica HOM05D007297 ORTHO05D009352 8.4e-57 224.2 166 66.9
Duzib132G0252 Durio zibethinus HOM05D007297 ORTHO05D009352 1.4e-56 223.4 161 67.7
FvH4_2g16900 Fragaria vesca HOM05D007297 ORTHO05D009352 1.4e-56 223.4 163 64.4
Lj9A408T85 Lonicera japonica HOM05D007297 ORTHO05D009352 2.5e-56 222.6 159 65.4
FAN27G2312 Fragaria x ananassa HOM05D007297 ORTHO05D009352 4.2e-56 221.9 163 64.4
Cfa010687 Carpinus fangiana HOM05D007297 ORTHO05D009352 5.5e-56 221.5 164 68.9
Thecc.02G146900 Theobroma cacao HOM05D007297 ORTHO05D009352 7.1e-56 221.1 153 67.3
MD05G1140800 Malus domestica HOM05D007297 ORTHO05D009352 9.3e-56 220.7 159 67.3
FAN15G2550 Fragaria x ananassa HOM05D007297 ORTHO05D009352 1.2e-55 220.3 161 64.0
Rhsim05G0044900 Rhododendron simsii HOM05D007297 ORTHO05D009352 3.5e-55 218.8 188 57.4
COL.COLO4_33139 Corchorus olitorius HOM05D007297 ORTHO05D009352 6.0e-55 218.0 152 69.7
CANSAT25G3874 Cannabis sativa HOM05D007297 ORTHO05D009352 7.9e-55 217.6 162 65.4
AUR62013182 Chenopodium quinoa HOM05D007297 ORTHO05D009352 7.9e-55 217.6 159 62.3
QL11p056524 Quercus lobata HOM05D007297 ORTHO05D009352 1.0e-54 217.2 163 66.3
GSVIVG01023865001 Vitis vinifera HOM05D007297 ORTHO05D009352 1.3e-54 216.9 161 64.6
EL10Ac9g21544 Beta vulgaris HOM05D007297 ORTHO05D009352 2.3e-54 216.1 161 62.1
Eucgr.H04994 Eucalyptus grandis HOM05D007297 ORTHO05D009352 3.0e-54 215.7 163 63.8
AUR62010181 Chenopodium quinoa HOM05D007297 ORTHO05D009352 3.9e-54 215.3 159 62.9
Hund06358 Selenicereus undatus HOM05D007297 ORTHO05D009352 1.9e-53 213.0 161 62.7
PGR042G0917 Punica granatum HOM05D007297 ORTHO05D009352 4.3e-53 211.8 166 60.2
MBI05_g18176_MAGBIO Magnolia biondii HOM05D007297 ORTHO05D009352 7.4e-53 211.1 163 60.7
TAR381G0094 Trochodendron aralioides HOM05D007297 ORTHO05D009352 1.1e-51 207.2 163 64.4
Sopen10g027070 Solanum pennellii HOM05D007297 ORTHO05D009352 5.9e-50 201.4 164 58.5
PGSC0003DMG400016829 Solanum tuberosum HOM05D007297 ORTHO05D009352 7.6e-50 201.1 172 56.4
Gohir.D01G012700 Gossypium hirsutum HOM05D007297 ORTHO05D009352 5.0e-49 198.4 151 64.2
Gorai.002G014500 Gossypium raimondii HOM05D007297 ORTHO05D009352 5.0e-49 198.4 151 64.2
PSO170G5512 Papaver somniferum HOM05D007297 ORTHO05D009352 6.5e-49 198.0 163 57.7
Solyc10g074580.2 Solanum lycopersicum HOM05D007297 ORTHO05D009352 6.5e-49 198.0 172 55.8
Gohir.A01G011500 Gossypium hirsutum HOM05D007297 ORTHO05D009352 1.1e-48 197.2 151 64.2
DCAR_006267 Daucus carota HOM05D007297 ORTHO05D009352 5.5e-48 194.9 161 55.9
Nitab4.5_0001700g0150 Nicotiana tabacum HOM05D007297 ORTHO05D009352 1.2e-47 193.7 168 56.5
Nn5g31034 Nelumbo nucifera HOM05D007297 ORTHO05D009352 1.6e-47 193.4 166 57.8
Lj5g0024553 Lotus japonicus HOM05D007297 ORTHO05D009352 2.7e-47 192.6 162 59.9
Sc18g0005810 Simmondsia chinensis HOM05D007297 ORTHO05D009352 2.7e-47 192.6 163 57.1
arahy.Tifrunner.gnm1.ann1.114EL0 Arachis hypogaea HOM05D007297 ORTHO05D009352 3.6e-47 192.2 162 61.1
CSS0007337 Camellia sinensis var. sinensis HOM05D007297 ORTHO05D009352 4.6e-47 191.8 162 59.3
Aqoxy5G00964 Aquilegia oxysepala HOM05D007297 ORTHO05D009352 1.3e-46 190.3 163 59.5
Aa31LG6G16890 Aethionema arabicum HOM05D007297 ORTHO05D009352 2.3e-46 189.5 164 53.0
MSTRG.27611 Avicennia marina HOM05D007297 ORTHO05D009352 3.0e-46 189.1 166 56.6
Migut.N01363 Erythranthe guttata HOM05D007297 ORTHO05D009352 5.1e-46 188.3 178 56.7
ECA233G4247 Erigeron canadensis HOM05D007297 ORTHO05D009352 6.7e-46 188.0 163 56.4
HanXRQChr16g0515151 Helianthus annuus HOM05D007297 ORTHO05D009352 6.7e-46 188.0 161 55.3
MD05G1140400 Malus domestica HOM05D007297 ORTHO05D009352 8.7e-46 187.6 159 59.7
Peaxi162Scf00374g00734 Petunia axillaris HOM05D007297 ORTHO05D009352 1.5e-45 186.8 188 52.1
ATR0807G066 Amborella trichopoda HOM05D007297 ORTHO05D009352 5.7e-45 184.9 173 56.1
Lsat_1_v5_gn_8_120880 Lactuca sativa HOM05D007297 ORTHO05D009352 7.4e-45 184.5 164 57.9
Glyma.10G244200 Glycine max HOM05D007297 ORTHO05D009352 2.8e-44 182.6 164 57.9
Thhalv10025549m.g Eutrema salsugineum HOM05D007297 ORTHO05D009352 3.7e-44 182.2 151 55.6
Phvul.007G061600 Phaseolus vulgaris HOM05D007297 ORTHO05D009352 6.3e-44 181.4 162 56.8
Hma1.2p1_1276F.1_g272150 Hydrangea macrophylla HOM05D007297 ORTHO05D009352 8.2e-44 181.0 155 59.4
VMungo0720G0116 Vigna mungo HOM05D007297 ORTHO05D009352 1.8e-43 179.9 162 56.2
Psat6g204280 Pisum sativum HOM05D007297 ORTHO05D009352 3.1e-43 179.1 162 54.9
Carub.0007s0016 Capsella rubella HOM05D007297 ORTHO05D009352 5.3e-43 178.3 151 55.0
Sp7g37510 Schrenkiella parvula HOM05D007297 ORTHO05D009352 2.0e-42 176.4 151 55.6
Ah.01g017630 Amaranthus hybridus HOM05D007297 ORTHO05D009352 2.6e-42 176.0 159 53.5
AT4G38225 Arabidopsis thaliana HOM05D007297 ORTHO05D009352 3.4e-42 175.6 152 54.6
Ca_10853_v3 Cicer arietinum L. HOM05D007297 ORTHO05D009352 3.4e-42 175.6 162 54.9
AL7G10130 Arabidopsis lyrata HOM05D002051 ORTHO05D002041 4.5e-42 175.3 176 49.4
THA.LOC104804081 Tarenaya hassleriana HOM05D007297 ORTHO05D009352 4.5e-42 175.3 167 53.3
Hma1.2p1_0271F.1_g108750 Hydrangea macrophylla HOM05D007297 ORTHO05D009352 2.2e-41 172.9 136 61.8
arahy.Tifrunner.gnm1.ann1.F5MDAV Arachis hypogaea HOM05D007297 ORTHO05D009352 3.8e-41 172.2 162 56.8
C05p07890 Brassica napus HOM05D007027 ORTHO05D008765 1.4e-40 170.2 152 53.9
BolC5t29540H Brassica oleracea HOM05D007027 ORTHO05D008765 1.4e-40 170.2 152 53.9
unitig_26.g9984 Utricularia gibba HOM05D007297 ORTHO05D009352 1.9e-40 169.9 172 52.3
Actinidia32005 Actinidia chinensis HOM05D007297 ORTHO05D009352 2.5e-40 169.5 126 65.9
SalBow5G1065 Salvia bowleyana HOM05D007297 ORTHO05D009352 2.5e-40 169.5 156 57.1
SGA_v2.0_scaffold98G29306 Striga asiatica HOM05D007297 ORTHO05D009352 3.2e-40 169.1 170 54.7
Cpa.g.sc60.2 Carica papaya HOM05D007297 ORTHO05D009352 7.2e-40 167.9 116 67.2
Cc09_g10870 Coffea canephora HOM05D007297 ORTHO05D009352 1.6e-39 166.8 199 46.7
CARHR294010 Cardamine hirsuta HOM05D007297 ORTHO05D009352 2.1e-39 166.4 157 52.2
SalBow5G0092 Salvia bowleyana HOM05D007297 ORTHO05D009352 2.1e-39 166.4 155 56.1
BraA06t23859Z Brassica rapa HOM05D007027 ORTHO05D008765 2.7e-39 166.0 152 53.9
Medtr1g102880 Medicago truncatula HOM05D007297 ORTHO05D009352 2.7e-39 166.0 162 53.1
A06p06480 Brassica napus HOM05D007027 ORTHO05D008765 7.9e-39 164.5 153 54.2
Hma1.2p1_1819F.1_g304100 Hydrangea macrophylla HOM05D007297 ORTHO05D009352 5.0e-33 145.2 114 63.2
Os03g0128800 Oryza sativa ssp. japonica HOM05D007297 ORTHO05D009352 5.0e-33 145.2 168 44.0
CDE05G3233 Ceratophyllum demersum HOM05D007297 ORTHO05D009352 3.2e-32 142.5 115 59.1
HPP92_012647 Vanilla planifolia HOM05D007297 ORTHO05D009352 2.1e-31 139.8 162 41.4
Zm00001eb002190 Zea mays HOM05D007297 ORTHO05D009352 2.7e-31 139.4 172 41.9
Hma1.2p1_0367F.1_g137160 Hydrangea macrophylla HOM05D007297 ORTHO05D009352 1.2e-23 114.0 82 65.9
Hma1.2p1_0422F.1_g150110 Hydrangea macrophylla HOM05D007297 ORTHO05D009352 1.4e-22 110.5 118 52.5
Mapoly0005s0259 Marchantia polymorpha HOM05D007297 ORTHO05D009352 1.7e-20 103.6 183 33.9
AagrBONN_evm.TU.Sc2ySwM_117.3353 Anthoceros agrestis HOM05D007297 ORTHO05D009352 3.5e-18 95.9 190 33.2
Cpa.g.sc2396.1 Carica papaya HOM05D007297 ORTHO05D009352 2.2e-17 93.2 65 63.1
Pp3c2_4700 Physcomitrium patens HOM05D007297 ORTHO05D009352 2.9e-17 92.8 188 34.0
Pp3c17_19510 Physcomitrium patens HOM05D007297 ORTHO05D009352 4.0e-14 82.4 191 31.4
CBR_g49409 Chara braunii HOM05D001007 ORTHO05D008005 3.6e-07 59.3 123 30.1
AL7G47220 Arabidopsis lyrata HOM05D007297 ORTHO05D009352 3.0e-06 56.2 58 44.8


User provided reference genes

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