Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr5.3441 Acer truncatum HOM05D007350 ORTHO05D009323 4.4e-115 417.9 205 100.0
Atru.chr6.83 Acer truncatum HOM05D007350 ORTHO05D009323 6.5e-34 148.3 107 75.7
Ciclev10029452m.g Citrus clementina HOM05D007350 ORTHO05D009323 8.0e-32 141.4 144 56.2
Haze_02104 Corylus avellana HOM05D007350 ORTHO05D009323 2.2e-29 133.3 154 51.9
Cpa.g.sc20.115 Carica papaya HOM05D007350 ORTHO05D009323 1.6e-27 127.1 149 52.3
Prupe.8G169100 Prunus persica HOM05D007350 ORTHO05D009323 1.6e-27 127.1 143 53.1
QL11p052353 Quercus lobata HOM05D007350 ORTHO05D009323 2.9e-26 122.9 152 53.3
TWI79G1045 Tripterygium wilfordii HOM05D007350 ORTHO05D009323 2.9e-26 122.9 149 55.7
GSVIVG01023973001 Vitis vinifera HOM05D007350 ORTHO05D009323 5.0e-26 122.1 143 55.9
Manes.04G071000 Manihot esculenta HOM05D007350 ORTHO05D009323 8.5e-26 121.3 146 53.4
Thecc.02G055300 Theobroma cacao HOM05D007350 ORTHO05D009323 1.9e-25 120.2 144 51.4
RcHm_v2.0_Chr6g0278921 Rosa chinensis HOM05D007350 ORTHO05D009323 5.5e-25 118.6 141 52.5
CiPaw.05G085400 Carya illinoinensis HOM05D007350 ORTHO05D009323 1.2e-24 117.5 153 52.9
FAN24G2045 Fragaria x ananassa HOM05D007350 ORTHO05D009323 1.2e-24 117.5 141 50.4
FAN15G0854 Fragaria x ananassa HOM05D007350 ORTHO05D009323 1.6e-24 117.1 141 50.4
FvH4_2g15660 Fragaria vesca HOM05D007350 ORTHO05D009323 2.1e-24 116.7 141 50.4
FAN27G1653 Fragaria x ananassa HOM05D007350 ORTHO05D009323 2.7e-24 116.3 170 44.1
RcHm_v2.0_Chr6g0278901 Rosa chinensis HOM05D007350 ORTHO05D009323 2.7e-24 116.3 141 51.8
PSO782G4816 Papaver somniferum HOM05D007350 ORTHO05D009323 8.8e-23 111.3 145 48.3
Gohir.A03G205900 Gossypium hirsutum HOM05D007350 ORTHO05D009323 1.2e-22 110.9 144 50.0
Sabra04G0119700 Salix brachista HOM05D007350 ORTHO05D009323 1.2e-22 110.9 136 52.9
Gohir.D02G227300 Gossypium hirsutum HOM05D007350 ORTHO05D009323 1.5e-22 110.5 144 50.0
Gorai.005G255200 Gossypium raimondii HOM05D007350 ORTHO05D009323 3.4e-22 109.4 144 50.0
PSO063G0872 Papaver somniferum HOM05D007350 ORTHO05D009323 3.4e-22 109.4 145 46.9
Eucgr.G01372 Eucalyptus grandis HOM05D007350 ORTHO05D009323 5.7e-22 108.6 112 53.6
MSTRG.20506 Avicennia marina HOM05D007350 ORTHO05D009323 9.8e-22 107.8 157 43.3
MD10G1127900 Malus domestica HOM05D007350 ORTHO05D009323 2.2e-21 106.7 77 74.0
Potri.004G177800 Populus trichocarpa HOM05D007350 ORTHO05D009323 3.7e-21 105.9 124 54.0
PGR042G2321 Punica granatum HOM05D007350 ORTHO05D009323 4.8e-21 105.5 162 43.8
Dinv09314 Davidia involucrata HOM05D007350 ORTHO05D009323 8.3e-21 104.8 130 49.2
Actinidia20526 Actinidia chinensis HOM05D007350 ORTHO05D009323 1.1e-20 104.4 151 42.4
Nn4g24553 Nelumbo nucifera HOM05D007350 ORTHO05D009323 1.1e-20 104.4 86 62.8
Duzib052G1005 Durio zibethinus HOM05D007350 ORTHO05D009323 1.8e-20 103.6 105 57.1
Actinidia18040 Actinidia chinensis HOM05D007350 ORTHO05D009323 5.4e-20 102.1 146 45.2
COL.COLO4_17379 Corchorus olitorius HOM05D007350 ORTHO05D009323 5.4e-20 102.1 144 43.8
Rhsim03G0180300 Rhododendron simsii HOM05D007350 ORTHO05D009323 5.4e-20 102.1 143 44.1
Sed0025246 Sechium edule HOM05D007350 ORTHO05D009323 1.2e-19 100.9 75 69.3
Glyma.19G012500 Glycine max HOM05D007350 ORTHO05D009323 1.6e-19 100.5 108 53.7
MBI19_g01918_MAGBIO Magnolia biondii HOM05D007350 ORTHO05D009323 1.6e-19 100.5 75 65.3
MELO3C013337.2 Cucumis melo HOM05D007350 ORTHO05D009323 2.7e-19 99.8 75 70.7
TAR374G1157 Trochodendron aralioides HOM05D007350 ORTHO05D009323 3.5e-19 99.4 91 59.3
arahy.Tifrunner.gnm1.ann1.7M0RFB Arachis hypogaea HOM05D007350 ORTHO05D009323 4.5e-19 99.0 65 75.4
ClCG02G003950 Citrullus lanatus HOM05D007350 ORTHO05D009323 4.5e-19 99.0 75 70.7
Cc09_g10330 Coffea canephora HOM05D007350 ORTHO05D009323 5.9e-19 98.6 76 67.1
Glyma.13G070400 Glycine max HOM05D007350 ORTHO05D009323 5.9e-19 98.6 85 60.0
Hma1.2p1_0032F.1_g019200 Hydrangea macrophylla HOM05D007350 ORTHO05D009323 7.7e-19 98.2 93 60.2
CsaV3_7G001160 Cucumis sativus L. HOM05D007350 ORTHO05D009323 1.0e-18 97.8 74 70.3
Migut.B01238 Erythranthe guttata HOM05D007350 ORTHO05D009323 1.0e-18 97.8 80 66.2
VMungo0464G1538 Vigna mungo HOM05D007350 ORTHO05D009323 1.7e-18 97.1 65 72.3
Phvul.004G019500 Phaseolus vulgaris HOM05D007350 ORTHO05D009323 2.3e-18 96.7 64 75.0
TPR.G2262 Trifolium pratense HOM05D007350 ORTHO05D009323 2.9e-18 96.3 86 60.5
Sc08g0002720 Simmondsia chinensis HOM05D007350 ORTHO05D009323 3.8e-18 95.9 77 64.9
Oeu025102.1 Olea europaea HOM05D007350 ORTHO05D009323 6.5e-18 95.1 87 59.8
Lalb_Chr02g0159761 Lupinus albus HOM05D007350 ORTHO05D009323 1.1e-17 94.4 85 60.0
Psat1g060320 Pisum sativum HOM05D007350 ORTHO05D009323 1.9e-17 93.6 81 60.5
Lj2g0024385 Lotus japonicus HOM05D007350 ORTHO05D009323 2.5e-17 93.2 81 60.5
Medtr6g007793 Medicago truncatula HOM05D007350 ORTHO05D009323 2.5e-17 93.2 85 56.5
Aqoxy3G04007 Aquilegia oxysepala HOM05D007350 ORTHO05D009323 5.5e-17 92.0 90 56.7
CANSAT78G0569 Cannabis sativa HOM05D007350 ORTHO05D009323 7.2e-17 91.7 79 62.0
THA.LOC104807801 Tarenaya hassleriana HOM05D007350 ORTHO05D009323 3.6e-16 89.4 81 60.5
Ca_04216_v3 Cicer arietinum L. HOM05D007350 ORTHO05D009323 4.7e-16 89.0 73 58.9
ATR0598G093 Amborella trichopoda HOM05D007350 ORTHO05D009323 8.0e-16 88.2 65 67.7
AUR62013001 Chenopodium quinoa HOM05D007350 ORTHO05D009323 8.0e-16 88.2 65 67.7
Carub.0007s0037 Capsella rubella HOM05D007350 ORTHO05D009323 1.0e-15 87.8 79 58.2
Hund16245 Selenicereus undatus HOM05D007350 ORTHO05D009323 1.4e-15 87.4 79 62.0
AT4G38490 Arabidopsis thaliana HOM05D007350 ORTHO05D009323 3.0e-15 86.3 118 43.2
Thhalv10026464m.g Eutrema salsugineum HOM05D007350 ORTHO05D009323 4.0e-15 85.9 143 40.6
Sp7g37290 Schrenkiella parvula HOM05D007350 ORTHO05D009323 6.8e-15 85.1 143 39.9
Aa31LG6G16700 Aethionema arabicum HOM05D005203 ORTHO05D006383 8.8e-15 84.7 77 58.4
Lsat_1_v5_gn_4_72021 Lactuca sativa HOM05D007350 ORTHO05D009323 8.8e-15 84.7 63 69.8
AL7G10350 Arabidopsis lyrata HOM05D007350 ORTHO05D009323 1.5e-14 84.0 144 40.3
HanXRQChr10g0298081 Helianthus annuus HOM05D007350 ORTHO05D009323 1.5e-14 84.0 77 57.1
Nitab4.5_0002598g0070 Nicotiana tabacum HOM05D007350 ORTHO05D009323 1.5e-14 84.0 128 43.8
CSS0005535 Camellia sinensis var. sinensis HOM05D007350 ORTHO05D009323 2.0e-14 83.6 123 40.7
Nitab4.5_0005221g0020 Nicotiana tabacum HOM05D007350 ORTHO05D009323 2.0e-14 83.6 127 44.1
CDE05G3477 Ceratophyllum demersum HOM05D007350 ORTHO05D009323 4.4e-14 82.4 64 62.5
AUR62010011 Chenopodium quinoa HOM05D007350 ORTHO05D009323 4.4e-14 82.4 65 64.6
Os09g0450200 Oryza sativa ssp. japonica HOM05D007350 ORTHO05D009323 4.4e-14 82.4 70 57.1
Solyc05g050720.4 Solanum lycopersicum HOM05D007350 ORTHO05D009323 4.4e-14 82.4 83 53.0
Sopen05g029130 Solanum pennellii HOM05D007350 ORTHO05D009323 4.4e-14 82.4 83 53.0
CAN.G112.14 Capsicum annuum HOM05D007350 ORTHO05D009323 5.7e-14 82.0 70 61.4
ECA234G1892 Erigeron canadensis HOM05D007350 ORTHO05D009323 1.7e-13 80.5 82 59.8
BcaC01g00233 Brassica carinata HOM05D007350 ORTHO05D009323 2.2e-13 80.1 77 54.5
CARHR294210 Cardamine hirsuta HOM05D007350 ORTHO05D009323 2.2e-13 80.1 60 63.3
SGA_v2.0_scaffold124G33608 Striga asiatica HOM05D007350 ORTHO05D009323 2.8e-13 79.7 90 52.2
RcHm_v2.0_Chr6g0278961 Rosa chinensis HOM05D007350 ORTHO05D009323 1.1e-12 77.8 58 62.1
BcaC01g00225 Brassica carinata HOM05D007350 ORTHO05D009323 1.8e-12 77.0 72 55.6
A08p24200 Brassica napus HOM05D007350 ORTHO05D009323 5.4e-12 75.5 72 55.6
BolC3t19964H Brassica oleracea HOM05D007350 ORTHO05D009323 7.0e-12 75.1 72 55.6
C03p77120 Brassica napus HOM05D007350 ORTHO05D009323 2.0e-11 73.6 72 54.2
BraA08t34374Z Brassica rapa HOM05D007350 ORTHO05D009323 2.7e-11 73.2 72 54.2
Hma1.2p1_0032F.1_g019210 Hydrangea macrophylla HOM05D007350 ORTHO05D009323 7.8e-11 71.6 45 84.4
SalBow5G3345 Salvia bowleyana HOM05D007350 ORTHO05D009323 2.9e-10 69.7 64 50.0
unitig_749.g14334 Utricularia gibba HOM05D000730 ORTHO05D000578 2.9e-10 69.7 61 54.1
HPP92_012658 Vanilla planifolia HOM05D007350 ORTHO05D009323 3.8e-10 69.3 107 36.4
DCAR_004401 Daucus carota HOM05D000250 ORTHO05D000625 6.6e-10 68.6 61 55.7
PGSC0003DMG400006999 Solanum tuberosum HOM05D007350 ORTHO05D009323 2.5e-09 66.6 65 52.3
CDE11G0403 Ceratophyllum demersum HOM05D007350 ORTHO05D009323 3.3e-09 66.2 46 71.7
SEGI_00987 Sequoiadendron giganteum HOM05D007350 ORTHO05D009323 2.8e-08 63.2 125 32.0
Pp3c6_16710 Physcomitrium patens HOM05D007350 ORTHO05D009323 1.4e-07 60.8 64 50.0
MD10G1128000 Malus domestica HOM05D007350 ORTHO05D009323 6.8e-07 58.5 47 68.1


User provided reference genes

Program Settings