Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr5.3198 Acer truncatum HOM05D000017 ORTHO05D000013 1.3e-114 416.4 201 100.0
Atru.chr7.529 Acer truncatum HOM05D000017 ORTHO05D000013 1.6e-64 250.0 150 80.0
Atru.chr6.1860 Acer truncatum HOM05D000017 ORTHO05D000013 1.7e-63 246.5 152 81.6
Atru.chr13.2210 Acer truncatum HOM05D000017 ORTHO05D000013 8.6e-63 244.2 152 79.6
Atru.chr2.2315 Acer truncatum HOM05D000017 ORTHO05D000013 4.0e-52 208.8 132 74.2
Atru.chr1.3834 Acer truncatum HOM05D000017 ORTHO05D000013 2.0e-51 206.5 254 44.1
Atru.chr2.2336 Acer truncatum HOM05D000017 ORTHO05D000013 7.8e-48 194.5 219 51.1
Atru.chr7.592 Acer truncatum HOM05D000017 ORTHO05D000013 5.0e-47 191.8 151 57.6
Atru.chr3.2988 Acer truncatum HOM05D000017 ORTHO05D000013 1.1e-46 190.7 156 56.4
Atru.chr3.4260 Acer truncatum HOM05D000017 ORTHO05D000013 2.8e-45 186.0 135 61.5
Atru.chr4.343 Acer truncatum HOM05D000017 ORTHO05D000013 6.4e-42 174.9 104 78.8
Atru.chr3.2307 Acer truncatum HOM05D000017 ORTHO05D000013 7.8e-40 167.9 104 76.9
Atru.chr12.2098 Acer truncatum HOM05D000017 ORTHO05D000013 3.3e-38 162.5 103 78.6
Atru.chr6.113 Acer truncatum HOM05D000017 ORTHO05D000013 5.6e-38 161.8 98 75.5
Atru.chr3.2792 Acer truncatum HOM05D000017 ORTHO05D000013 1.2e-37 160.6 104 72.1
Atru.chr4.2098 Acer truncatum HOM05D000017 ORTHO05D000013 8.1e-37 157.9 104 66.3
Atru.chr6.209 Acer truncatum HOM05D000017 ORTHO05D000013 1.3e-34 150.6 96 74.0
Atru.chr1.2347 Acer truncatum HOM05D000017 ORTHO05D000013 1.5e-27 127.1 73 82.2
Atru.chr3.2979 Acer truncatum HOM05D000017 ORTHO05D000013 6.0e-24 115.2 156 41.0
ClCG01G015130 Citrullus lanatus HOM05D000017 ORTHO05D000013 1.3e-15 87.4 157 28.7
Atru.chr6.539 Acer truncatum HOM05D000017 ORTHO05D000013 1.7e-15 87.0 55 76.4
Sed0022463 Sechium edule HOM05D000017 ORTHO05D000013 1.7e-15 87.0 147 26.5
Oeu035486.1 Olea europaea HOM05D000017 ORTHO05D000013 3.0e-15 86.3 125 33.6
Atru.chr5.1912 Acer truncatum HOM05D000017 ORTHO05D000013 3.9e-15 85.9 153 34.6
Atru.chr8.255 Acer truncatum HOM05D000017 ORTHO05D000013 5.1e-15 85.5 154 27.9
CsaV3_6G041240 Cucumis sativus L. HOM05D000017 ORTHO05D000013 6.6e-15 85.1 183 24.6
Oeu020631.1 Olea europaea HOM05D000017 ORTHO05D000013 6.6e-15 85.1 121 33.9
Oeu009060.1 Olea europaea HOM05D000017 ORTHO05D000013 8.7e-15 84.7 125 32.8
Oeu024293.1 Olea europaea HOM05D000017 ORTHO05D000013 1.5e-14 84.0 141 31.2
Oeu029602.1 Olea europaea HOM05D000017 ORTHO05D000013 1.9e-14 83.6 121 33.9
Oeu064469.1 Olea europaea HOM05D000017 ORTHO05D000013 1.9e-14 83.6 121 33.9
Atru.chr7.74 Acer truncatum HOM05D000017 ORTHO05D000013 2.5e-14 83.2 127 32.3
Oeu055217.1 Olea europaea HOM05D000017 ORTHO05D000013 2.5e-14 83.2 122 32.8
Atru.chr6.42 Acer truncatum HOM05D000017 ORTHO05D000013 3.3e-14 82.8 155 30.3
Oeu042395.1 Olea europaea HOM05D000017 ORTHO05D000013 3.3e-14 82.8 125 32.0
CANSAT11G1061 Cannabis sativa HOM05D000017 ORTHO05D000013 7.3e-14 81.6 125 30.4
Oeu056308.1 Olea europaea HOM05D000017 ORTHO05D000013 9.6e-14 81.3 121 33.1
Atru.chr1.3548 Acer truncatum HOM05D000017 ORTHO05D000013 1.3e-13 80.9 160 29.4
Atru.chr3.3437 Acer truncatum HOM05D000017 ORTHO05D000013 1.3e-13 80.9 155 30.3
Atru.chr2.1868 Acer truncatum HOM05D000017 ORTHO05D000013 1.6e-13 80.5 141 28.4
CANSAT01G2587 Cannabis sativa HOM05D000017 ORTHO05D000013 1.6e-13 80.5 125 31.2
Oeu058107.2 Olea europaea HOM05D000017 ORTHO05D000013 1.6e-13 80.5 122 34.4
Atru.chr5.1934 Acer truncatum HOM05D000017 ORTHO05D000013 2.1e-13 80.1 151 29.8
CANSAT78G0589 Cannabis sativa HOM05D000017 ORTHO05D000013 2.8e-13 79.7 137 29.2
CANSAT80G0369 Cannabis sativa HOM05D000017 ORTHO05D000013 2.8e-13 79.7 125 30.4
Oeu010167.1 Olea europaea HOM05D000017 ORTHO05D000013 2.8e-13 79.7 125 32.0
Atru.chr1.2169 Acer truncatum HOM05D000017 ORTHO05D000013 3.6e-13 79.3 129 33.3
TAR423G0001 Trochodendron aralioides HOM05D000017 ORTHO05D000013 4.8e-13 79.0 193 28.0
Atru.chr4.1135 Acer truncatum HOM05D000017 ORTHO05D000013 6.2e-13 78.6 153 32.0
Atru.chr12.1233 Acer truncatum HOM05D000017 ORTHO05D000013 8.1e-13 78.2 155 30.3
Atru.chr4.284 Acer truncatum HOM05D000017 ORTHO05D000013 8.1e-13 78.2 130 29.2
Atru.chr4.975 Acer truncatum HOM05D000017 ORTHO05D000013 1.1e-12 77.8 154 27.9
ATR0648G001 Amborella trichopoda HOM05D000017 ORTHO05D021215 1.1e-12 77.8 125 30.4
CANSAT21G2374 Cannabis sativa HOM05D000017 ORTHO05D000013 1.1e-12 77.8 125 30.4
Oeu015457.1 Olea europaea HOM05D000017 ORTHO05D000013 1.1e-12 77.8 125 28.8
CANSAT25G2383 Cannabis sativa HOM05D000017 ORTHO05D000013 1.4e-12 77.4 125 29.6
Nitab4.5_0000709g0030 Nicotiana tabacum HOM05D000017 ORTHO05D002765 1.4e-12 77.4 124 29.0
Oeu028303.1 Olea europaea HOM05D000017 ORTHO05D000013 1.4e-12 77.4 103 34.0
Atru.chr6.2036 Acer truncatum HOM05D000017 ORTHO05D000013 1.8e-12 77.0 53 69.8
Sopen05g022560 Solanum pennellii HOM05D000017 ORTHO05D000013 1.8e-12 77.0 127 29.1
Oeu006647.1 Olea europaea HOM05D000017 ORTHO05D000013 3.1e-12 76.3 101 37.6
TWI53G1455 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 4.0e-12 75.9 122 28.7
Atru.chr3.3652 Acer truncatum HOM05D000017 ORTHO05D000013 6.9e-12 75.1 128 32.8
CANSAT54G1096 Cannabis sativa HOM05D000017 ORTHO05D000013 6.9e-12 75.1 135 30.4
Nitab4.5_0011642g0030 Nicotiana tabacum HOM05D007248 ORTHO05D002765 6.9e-12 75.1 127 27.6
TWI32G1027 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 6.9e-12 75.1 122 27.9
Nitab4.5_0010618g0050 Nicotiana tabacum HOM05D000017 ORTHO05D000013 1.2e-11 74.3 127 27.6
Oeu019372.1 Olea europaea HOM05D000017 ORTHO05D000013 1.2e-11 74.3 103 32.0
Oeu020193.1 Olea europaea HOM05D000017 ORTHO05D000013 1.2e-11 74.3 126 29.4
CANSAT35G1887 Cannabis sativa HOM05D000017 ORTHO05D000013 1.5e-11 73.9 135 29.6
Atru.chr4.2269 Acer truncatum HOM05D000017 ORTHO05D013913 2.0e-11 73.6 145 30.3
Nitab4.5_0003730g0050 Nicotiana tabacum HOM05D000017 ORTHO05D002765 2.0e-11 73.6 124 28.2
Oeu021079.1 Olea europaea HOM05D000017 ORTHO05D000013 2.0e-11 73.6 103 34.0
Oeu044754.1 Olea europaea HOM05D000017 ORTHO05D000013 2.0e-11 73.6 164 25.0
TWI53G1561 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 2.0e-11 73.6 122 27.9
Nitab4.5_0008791g0030 Nicotiana tabacum HOM05D007248 ORTHO05D002765 5.8e-11 72.0 124 28.2
Nitab4.5_0001968g0150 Nicotiana tabacum HOM05D007248 ORTHO05D002765 7.6e-11 71.6 127 27.6
Nitab4.5_0008036g0020 Nicotiana tabacum HOM05D007248 ORTHO05D002765 7.6e-11 71.6 127 27.6
Oeu009213.1 Olea europaea HOM05D000017 ORTHO05D000013 9.9e-11 71.2 103 33.0
Nitab4.5_0007005g0050 Nicotiana tabacum HOM05D007248 ORTHO05D002765 1.3e-10 70.9 127 27.6
Nitab4.5_0010319g0060 Nicotiana tabacum HOM05D007248 ORTHO05D002765 1.3e-10 70.9 123 28.5
Atru.chr10.1905 Acer truncatum HOM05D000017 ORTHO05D000013 1.7e-10 70.5 121 34.7
Atru.chr9.320 Acer truncatum HOM05D000017 ORTHO05D000013 1.7e-10 70.5 110 34.5
CANSAT78G2408 Cannabis sativa HOM05D000017 ORTHO05D000013 1.7e-10 70.5 137 27.7
Oeu039381.1 Olea europaea HOM05D000017 ORTHO05D000013 1.7e-10 70.5 103 30.1
CANSAT54G1288 Cannabis sativa HOM05D000017 ORTHO05D000013 2.2e-10 70.1 126 27.0
Nitab4.5_0004496g0020 Nicotiana tabacum HOM05D007248 ORTHO05D000013 2.2e-10 70.1 121 27.3
Nitab4.5_0013025g0030 Nicotiana tabacum HOM05D007248 ORTHO05D002765 2.2e-10 70.1 118 28.0
A07p11640 Brassica napus HOM05D015473 ORTHO05D021626 2.9e-10 69.7 126 23.8
CANSAT19G0002 Cannabis sativa HOM05D000017 ORTHO05D000013 2.9e-10 69.7 179 25.1
Oeu027936.1 Olea europaea HOM05D000017 ORTHO05D000013 2.9e-10 69.7 103 32.0
Oeu054336.1 Olea europaea HOM05D000017 ORTHO05D000013 2.9e-10 69.7 103 31.1
PSO210G1360 Papaver somniferum HOM05D000017 ORTHO05D000013 2.9e-10 69.7 125 28.8
Oeu048927.1 Olea europaea HOM05D000017 ORTHO05D000013 3.8e-10 69.3 103 31.1
Atru.chr9.574 Acer truncatum HOM05D000017 ORTHO05D000013 4.9e-10 68.9 121 30.6
PSO761G0585 Papaver somniferum HOM05D000017 ORTHO05D000013 4.9e-10 68.9 125 28.0
ATR0915G001 Amborella trichopoda HOM05D000017 ORTHO05D000013 6.4e-10 68.6 125 28.8
C07p17520 Brassica napus HOM05D015473 ORTHO05D011560 6.4e-10 68.6 126 24.6
BolC7t42260H Brassica oleracea HOM05D015473 ORTHO05D011560 6.4e-10 68.6 126 24.6
Nitab4.5_0008756g0020 Nicotiana tabacum HOM05D007248 ORTHO05D002765 6.4e-10 68.6 118 26.3
C04p57220 Brassica napus HOM05D009136 ORTHO05D011560 1.1e-09 67.8 110 25.5
Oeu041491.1 Olea europaea HOM05D000017 ORTHO05D000013 1.1e-09 67.8 126 28.6
Oeu043048.1 Olea europaea HOM05D000017 ORTHO05D000013 1.1e-09 67.8 126 28.6
Atru.chr1.2128 Acer truncatum HOM05D000017 ORTHO05D000013 1.4e-09 67.4 118 26.3
Atru.chr1.1594 Acer truncatum HOM05D000017 ORTHO05D000013 1.9e-09 67.0 97 30.9
Oeu034871.1 Olea europaea HOM05D000017 ORTHO05D000013 2.4e-09 66.6 175 23.4
C05p35180 Brassica napus HOM05D000017 ORTHO05D000013 3.2e-09 66.2 122 24.6
Atru.chr13.2247 Acer truncatum HOM05D000017 ORTHO05D000013 4.2e-09 65.9 135 25.9
Atru.chr12.1296 Acer truncatum HOM05D000017 ORTHO05D000013 5.4e-09 65.5 50 58.0
Atru.chr6.1119 Acer truncatum HOM05D000017 ORTHO05D000013 5.4e-09 65.5 121 30.6
CANSAT64G0129 Cannabis sativa HOM05D000017 ORTHO05D000013 5.4e-09 65.5 126 26.2
Atru.chr9.236 Acer truncatum HOM05D000017 ORTHO05D000013 9.3e-09 64.7 83 36.1
Nitab4.5_0000814g0120 Nicotiana tabacum HOM05D007248 ORTHO05D002765 1.2e-08 64.3 125 26.4
Oeu016698.1 Olea europaea HOM05D000017 ORTHO05D000013 1.2e-08 64.3 138 28.3
Atru.chr7.247 Acer truncatum HOM05D000017 ORTHO05D000013 1.6e-08 63.9 121 29.8
C07p25820 Brassica napus HOM05D000017 ORTHO05D011560 1.6e-08 63.9 122 23.8
Lsat_1_v5_gn_8_151160 Lactuca sativa HOM05D000017 ORTHO05D000013 1.6e-08 63.9 121 25.6
CANSAT25G1793 Cannabis sativa HOM05D000017 ORTHO05D000013 2.7e-08 63.2 127 27.6
CANSAT56G0213 Cannabis sativa HOM05D000017 ORTHO05D000013 2.7e-08 63.2 114 28.9
Oeu007459.1 Olea europaea HOM05D000017 ORTHO05D000013 2.7e-08 63.2 103 29.1
TWI38G0900 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 2.7e-08 63.2 123 26.8
CANSAT11G0629 Cannabis sativa HOM05D000017 ORTHO05D000013 3.5e-08 62.8 125 27.2
Oeu063098.1 Olea europaea HOM05D000017 ORTHO05D000013 3.5e-08 62.8 102 26.5
Atru.chr11.417 Acer truncatum HOM05D000017 ORTHO05D000013 4.6e-08 62.4 121 28.1
BolC6t36480H Brassica oleracea HOM05D000017 ORTHO05D000013 6.0e-08 62.0 133 28.6
TWI53G0460 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 6.0e-08 62.0 84 31.0
Atru.chr10.1013 Acer truncatum HOM05D000004 ORTHO05D000002 7.9e-08 61.6 75 37.3
Hma1.2p1_0399F.1_g144100 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 7.9e-08 61.6 124 27.4
Oeu029822.1 Olea europaea HOM05D000017 ORTHO05D000013 7.9e-08 61.6 101 31.7
Nitab4.5_0002612g0060 Nicotiana tabacum HOM05D007248 ORTHO05D000013 1.0e-07 61.2 88 30.7
Oeu041330.1 Olea europaea HOM05D000017 ORTHO05D000013 1.3e-07 60.8 125 29.6
CANSAT01G0081 Cannabis sativa HOM05D000017 ORTHO05D000013 1.8e-07 60.5 131 26.7
C01p09540 Brassica napus HOM05D000017 ORTHO05D000013 2.3e-07 60.1 121 23.1
CANSAT21G0624 Cannabis sativa HOM05D000017 ORTHO05D000013 2.3e-07 60.1 125 25.6
Lsat_1_v5_gn_4_105381 Lactuca sativa HOM05D000017 ORTHO05D000013 2.3e-07 60.1 119 24.4
CANSAT01G1220 Cannabis sativa HOM05D000017 ORTHO05D000013 3.0e-07 59.7 131 26.7
CANSAT11G1223 Cannabis sativa HOM05D000017 ORTHO05D000013 3.0e-07 59.7 131 26.7
CANSAT35G0979 Cannabis sativa HOM05D000017 ORTHO05D000013 3.0e-07 59.7 131 26.7
CANSAT35G1006 Cannabis sativa HOM05D000017 ORTHO05D000013 3.0e-07 59.7 131 26.7
CANSAT54G2057 Cannabis sativa HOM05D000017 ORTHO05D000013 3.0e-07 59.7 131 26.7
CDE02G1797 Ceratophyllum demersum HOM05D000017 ORTHO05D000013 3.0e-07 59.7 134 27.6
TWI31G0287 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 3.0e-07 59.7 96 29.2
Hma1.2p1_0690F.1_g204040 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 3.9e-07 59.3 124 25.8
Atru.chr5.2094 Acer truncatum HOM05D000017 ORTHO05D000013 5.1e-07 58.9 113 25.7
Atru.chr5.1891 Acer truncatum HOM05D000017 ORTHO05D000013 8.7e-07 58.2 114 26.3
Sopen08g005870 Solanum pennellii HOM05D000017 ORTHO05D000013 8.7e-07 58.2 128 25.8
Nitab4.5_0001472g0130 Nicotiana tabacum HOM05D000017 ORTHO05D000013 1.1e-06 57.8 84 31.0
Prupe.8G156200 Prunus persica HOM05D000017 ORTHO05D000013 1.1e-06 57.8 122 27.9
TAR118G0002 Trochodendron aralioides HOM05D000017 ORTHO05D000013 1.1e-06 57.8 122 23.8
TAR286G0001 Trochodendron aralioides HOM05D000017 ORTHO05D000013 1.1e-06 57.8 122 23.8
TAR640G0005 Trochodendron aralioides HOM05D000017 ORTHO05D000013 1.1e-06 57.8 122 23.8
MSTRG.16658 Avicennia marina HOM05D000017 ORTHO05D000013 1.5e-06 57.4 124 26.6
C04p20930 Brassica napus HOM05D019822 ORTHO05D000013 1.5e-06 57.4 152 21.7
CANSAT54G0192 Cannabis sativa HOM05D000017 ORTHO05D000013 1.5e-06 57.4 109 24.8
MBI05_g14906_MAGBIO Magnolia biondii HOM05D009229 ORTHO05D010914 1.5e-06 57.4 144 22.9
Oeu010760.1 Olea europaea HOM05D000017 ORTHO05D000013 1.5e-06 57.4 100 28.0
AUR62002284 Chenopodium quinoa HOM05D000017 ORTHO05D000013 1.9e-06 57.0 125 28.0
Ca_18426_v3 Cicer arietinum L. HOM05D000017 ORTHO05D000013 2.5e-06 56.6 122 27.0
Hma1.2p1_0203F.1_g086740 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 2.5e-06 56.6 123 25.2
Sabra09G0063600 Salix brachista HOM05D000017 ORTHO05D000013 2.5e-06 56.6 122 27.0
Sopen12g002860 Solanum pennellii HOM05D000017 ORTHO05D000013 2.5e-06 56.6 125 27.2
CANSAT35G1021 Cannabis sativa HOM05D000017 ORTHO05D000013 3.3e-06 56.2 131 26.0
Hma1.2p1_0098F.1_g048460 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 3.3e-06 56.2 124 25.0
Atru.chr3.2126 Acer truncatum HOM05D000017 ORTHO05D000013 4.3e-06 55.8 73 34.2
CANSAT54G0083 Cannabis sativa HOM05D010396 ORTHO05D000013 4.3e-06 55.8 126 26.2
Nitab4.5_0006628g0040 Nicotiana tabacum HOM05D007248 ORTHO05D002765 4.3e-06 55.8 127 25.2
CANSAT01G1186 Cannabis sativa HOM05D000017 ORTHO05D000013 5.6e-06 55.5 121 27.3
MD15G1396600 Malus domestica HOM05D000017 ORTHO05D000013 5.6e-06 55.5 122 27.0
Hma1.2p1_0601F.1_g187270 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 7.4e-06 55.1 124 25.0
Nitab4.5_0003533g0070 Nicotiana tabacum HOM05D007248 ORTHO05D002765 7.4e-06 55.1 83 31.3
Ciclev10031984m.g Citrus clementina HOM05D042200 ORTHO05D013913 9.6e-06 54.7 70 35.7
Oeu059246.1 Olea europaea HOM05D012404 ORTHO05D002765 9.6e-06 54.7 125 28.8
TPR.G35335 Trifolium pratense HOM05D000017 ORTHO05D000013 9.6e-06 54.7 121 26.4
TWI09G0713 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 9.6e-06 54.7 91 29.7
TWI31G0342 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 9.6e-06 54.7 91 29.7
TWI36G0864 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 9.6e-06 54.7 91 29.7
TWI53G0289 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 9.6e-06 54.7 91 29.7
TWI75G1336 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 9.6e-06 54.7 91 29.7


User provided reference genes

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