Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr5.3145 Acer truncatum HOM05D007135 ORTHO05D008880 1.5e-43 179.1 91 100.0
COL.COLO4_26047 Corchorus olitorius HOM05D007135 ORTHO05D008880 1.2e-32 142.9 91 82.4
Cpa.g.sc150.16 Carica papaya HOM05D007135 ORTHO05D008880 1.1e-30 136.3 91 76.9
Cfa005113 Carpinus fangiana HOM05D007135 ORTHO05D008880 3.3e-30 134.8 91 80.2
Thecc.02G074900 Theobroma cacao HOM05D007135 ORTHO05D008880 3.3e-30 134.8 91 80.2
Duzib132G0527 Durio zibethinus HOM05D007135 ORTHO05D008880 5.6e-30 134.0 91 79.1
Ciclev10029699m.g Citrus clementina HOM05D007135 ORTHO05D008880 4.8e-29 131.0 91 78.0
Duzib248G1605 Durio zibethinus HOM05D007135 ORTHO05D008880 1.4e-28 129.4 91 78.0
FAN15G3517 Fragaria x ananassa HOM05D007135 ORTHO05D008880 2.4e-28 128.6 91 71.4
FAN27G3517 Fragaria x ananassa HOM05D007135 ORTHO05D008880 2.4e-28 128.6 91 72.5
QL11p046458 Quercus lobata HOM05D007135 ORTHO05D008880 2.4e-28 128.6 94 70.2
PGR142G3962 Punica granatum HOM05D007135 ORTHO05D008880 3.1e-28 128.3 94 72.3
Haze_02238 Corylus avellana HOM05D007135 ORTHO05D008880 5.3e-28 127.5 91 75.8
Potri.009G124700 Populus trichocarpa HOM05D007135 ORTHO05D008880 6.9e-28 127.1 89 74.2
RcHm_v2.0_Chr6g0267951 Rosa chinensis HOM05D007135 ORTHO05D008880 6.9e-28 127.1 95 69.5
MELO3C013419.2 Cucumis melo HOM05D007135 ORTHO05D008880 9.0e-28 126.7 92 75.0
CANSAT11G0395 Cannabis sativa HOM05D007135 ORTHO05D008880 1.5e-27 125.9 101 67.3
Manes.04G083200 Manihot esculenta HOM05D007135 ORTHO05D008880 2.6e-27 125.2 89 71.9
Gorai.005G250000 Gossypium raimondii HOM05D007135 ORTHO05D008880 3.4e-27 124.8 92 73.9
Gohir.D02G222000 Gossypium hirsutum HOM05D007135 ORTHO05D008880 4.5e-27 124.4 92 73.9
Aqoxy2G03368 Aquilegia oxysepala HOM05D007135 ORTHO05D008880 7.6e-27 123.6 93 67.7
Gorai.002G149200 Gossypium raimondii HOM05D007135 ORTHO05D008880 1.3e-26 122.9 92 72.8
Manes.11G081700 Manihot esculenta HOM05D007135 ORTHO05D008880 1.3e-26 122.9 89 71.9
Solyc01g110400.2 Solanum lycopersicum HOM05D007135 ORTHO05D008880 1.7e-26 122.5 91 69.2
Sopen01g052550 Solanum pennellii HOM05D007135 ORTHO05D008880 1.7e-26 122.5 91 69.2
FvH4_2g10470 Fragaria vesca HOM05D007135 ORTHO05D008880 2.2e-26 122.1 89 69.7
FAN24G2677 Fragaria x ananassa HOM05D007135 ORTHO05D008880 2.2e-26 122.1 89 69.7
MD10G1062900 Malus domestica HOM05D007135 ORTHO05D008880 2.2e-26 122.1 100 67.0
Prupe.8G083700 Prunus persica HOM05D007135 ORTHO05D008880 2.2e-26 122.1 100 67.0
TWI75G0424 Tripterygium wilfordii HOM05D007135 ORTHO05D008880 4.9e-26 120.9 92 67.4
Sed0017056 Sechium edule HOM05D007135 ORTHO05D008880 6.5e-26 120.6 91 72.5
Gohir.A03G200700 Gossypium hirsutum HOM05D007135 ORTHO05D008880 1.4e-25 119.4 91 69.2
Gohir.A13G090900 Gossypium hirsutum HOM05D007135 ORTHO05D008880 1.4e-25 119.4 92 70.7
Thhalv10000391m.g Eutrema salsugineum HOM05D007135 ORTHO05D008880 1.9e-25 119.0 100 67.0
AL4G10430 Arabidopsis lyrata HOM05D007135 ORTHO05D008880 2.5e-25 118.6 96 65.6
Potri.004G163100 Populus trichocarpa HOM05D007135 ORTHO05D008880 3.2e-25 118.2 93 71.0
Nn5g29239 Nelumbo nucifera HOM05D007135 ORTHO05D008880 4.2e-25 117.9 88 68.2
Migut.B00173 Erythranthe guttata HOM05D007135 ORTHO05D008880 5.5e-25 117.5 93 67.7
ClCG02G004560 Citrullus lanatus HOM05D007135 ORTHO05D008880 7.1e-25 117.1 92 69.6
C08p41660 Brassica napus HOM05D007135 ORTHO05D008880 1.6e-24 115.9 96 66.7
Carub.0004s0033 Capsella rubella HOM05D007135 ORTHO05D008880 1.6e-24 115.9 100 65.0
EL10Ac9g21635 Beta vulgaris HOM05D007135 ORTHO05D008880 2.1e-24 115.5 95 66.3
Cc02_g16900 Coffea canephora HOM05D007135 ORTHO05D008880 2.1e-24 115.5 99 61.6
AT2G21290 Arabidopsis thaliana HOM05D007135 ORTHO05D008880 2.7e-24 115.2 100 64.0
BolC8t51729H Brassica oleracea HOM05D007135 ORTHO05D008880 2.7e-24 115.2 90 64.4
CSS0018566 Camellia sinensis var. sinensis HOM05D007135 ORTHO05D008880 2.7e-24 115.2 89 69.7
DCAR_003685 Daucus carota HOM05D007135 ORTHO05D008880 3.5e-24 114.8 96 65.6
Sp4g00480 Schrenkiella parvula HOM05D007135 ORTHO05D008880 4.6e-24 114.4 100 64.0
CARHR112160 Cardamine hirsuta HOM05D007135 ORTHO05D008880 6.0e-24 114.0 100 65.0
Aa31LG7G15200 Aethionema arabicum HOM05D007135 ORTHO05D008880 1.3e-23 112.8 99 64.6
Ah.01g018800 Amaranthus hybridus HOM05D007135 ORTHO05D008880 1.3e-23 112.8 93 61.3
CSS0017994 Camellia sinensis var. sinensis HOM05D007135 ORTHO05D008880 1.8e-23 112.5 89 66.3
A09p58330 Brassica napus HOM05D007135 ORTHO05D008880 3.0e-23 111.7 90 63.3
BraA09t41224Z Brassica rapa HOM05D007135 ORTHO05D008880 5.1e-23 110.9 92 64.1
BcaB08g34980 Brassica carinata HOM05D007135 ORTHO05D008880 6.7e-23 110.5 91 67.0
AUR62010386 Chenopodium quinoa HOM05D007135 ORTHO05D008880 6.7e-23 110.5 94 61.7
AUR62016832 Chenopodium quinoa HOM05D007135 ORTHO05D008880 6.7e-23 110.5 94 61.7
SalBow6G3736 Salvia bowleyana HOM05D007135 ORTHO05D008880 6.7e-23 110.5 92 67.4
PSO541G1924 Papaver somniferum HOM05D007135 ORTHO05D008880 1.1e-22 109.8 91 62.6
Psat5g003840 Pisum sativum HOM05D007135 ORTHO05D008880 1.1e-22 109.8 88 69.3
CAN.G170.101 Capsicum annuum HOM05D007135 ORTHO05D008880 1.9e-22 109.0 91 62.6
Lalb_Chr23g0265121 Lupinus albus HOM05D007135 ORTHO05D008880 2.5e-22 108.6 89 66.3
Lalb_Chr23g0265141 Lupinus albus HOM05D007135 ORTHO05D008880 2.5e-22 108.6 89 66.3
unitig_60.g25867 Utricularia gibba HOM05D007135 ORTHO05D008880 2.5e-22 108.6 83 66.3
MD05G1055600 Malus domestica HOM05D007135 ORTHO05D008880 3.3e-22 108.2 97 61.9
PSO675G0190 Papaver somniferum HOM05D007135 ORTHO05D008880 4.3e-22 107.8 91 62.6
Sc08g0000910 Simmondsia chinensis HOM05D007135 ORTHO05D008880 4.3e-22 107.8 97 58.8
ATR0149G014 Amborella trichopoda HOM05D007135 ORTHO05D008880 1.3e-21 106.3 92 64.1
Rhsim05G0068200 Rhododendron simsii HOM05D007135 ORTHO05D008880 1.3e-21 106.3 79 72.2
Gohir.D13G096700 Gossypium hirsutum HOM05D007135 ORTHO05D008880 1.6e-21 105.9 83 72.3
BcaC02g08801 Brassica carinata HOM05D007135 ORTHO05D008880 2.2e-21 105.5 99 60.6
BolC4t26651H Brassica oleracea HOM05D007135 ORTHO05D008880 2.2e-21 105.5 99 60.6
Lj1g0005652 Lotus japonicus HOM05D007135 ORTHO05D008880 2.2e-21 105.5 88 65.9
MBI05_g16268_MAGBIO Magnolia biondii HOM05D007135 ORTHO05D008880 2.2e-21 105.5 91 65.9
Phvul.009G002700 Phaseolus vulgaris HOM05D007135 ORTHO05D008880 3.7e-21 104.8 59 86.4
TPR.G32169 Trifolium pratense HOM05D007135 ORTHO05D008880 3.7e-21 104.8 88 64.8
TWI79G1445 Tripterygium wilfordii HOM05D007135 ORTHO05D008880 4.8e-21 104.4 80 72.5
A04p16070 Brassica napus HOM05D007135 ORTHO05D008880 6.3e-21 104.0 95 58.9
C04p50530 Brassica napus HOM05D007135 ORTHO05D008880 6.3e-21 104.0 93 58.1
BraA04t17247Z Brassica rapa HOM05D007135 ORTHO05D008880 6.3e-21 104.0 95 58.9
Ca_15331_v3 Cicer arietinum L. HOM05D007135 ORTHO05D008880 8.2e-21 103.6 91 61.5
Medtr3g117570 Medicago truncatula HOM05D007135 ORTHO05D008880 8.2e-21 103.6 90 63.3
Dinv26818 Davidia involucrata HOM05D000193 ORTHO05D000402 1.4e-20 102.8 78 67.9
vmacro17421 Vaccinium macrocarpon HOM05D007135 ORTHO05D008880 1.4e-20 102.8 78 70.5
CiPaw.05G073400 Carya illinoinensis HOM05D007135 ORTHO05D008880 1.8e-20 102.4 78 73.1
BcaC07g41158 Brassica carinata HOM05D007135 ORTHO05D008880 2.4e-20 102.1 94 61.7
Actinidia02247 Actinidia chinensis HOM05D007135 ORTHO05D008880 1.2e-19 99.8 101 60.4
GSVIVG01024170001 Vitis vinifera HOM05D007135 ORTHO05D008880 2.0e-19 99.0 76 69.7
SHI05613 Sapria himalayana HOM05D007135 ORTHO05D008880 3.4e-19 98.2 83 61.4
Os09g0528100 Oryza sativa ssp. japonica HOM05D007135 ORTHO05D008880 4.5e-19 97.8 72 69.4
Duzib052G0169 Durio zibethinus HOM05D007135 ORTHO05D008880 7.6e-19 97.1 75 70.7
Nitab4.5_0005932g0010 Nicotiana tabacum HOM05D007135 ORTHO05D008880 1.3e-18 96.3 81 67.9
Nitab4.5_0005266g0060 Nicotiana tabacum HOM05D007135 ORTHO05D008880 2.2e-18 95.5 88 67.0
TAR381G0296 Trochodendron aralioides HOM05D007135 ORTHO05D008880 5.0e-18 94.4 77 66.2
ECA234G2991 Erigeron canadensis HOM05D007135 ORTHO05D008880 6.5e-18 94.0 54 79.6
Sabra09G0095700 Salix brachista HOM05D007135 ORTHO05D008880 3.2e-17 91.7 74 66.2
CsaV3_7G000400 Cucumis sativus L. HOM05D007135 ORTHO05D008880 2.7e-16 88.6 77 66.2
THA.LOC104824791 Tarenaya hassleriana HOM05D007135 ORTHO05D008880 4.6e-16 87.8 83 59.0
Sabra04G0109400 Salix brachista HOM05D007135 ORTHO05D008880 6.7e-15 84.0 77 58.4
FAN20G0703 Fragaria x ananassa HOM05D007135 ORTHO05D008880 8.8e-15 83.6 79 59.5
HanXRQChr10g0294181 Helianthus annuus HOM05D007135 ORTHO05D008880 9.7e-14 80.1 79 57.0
Glyma.04G007900 Glycine max HOM05D007135 ORTHO05D008880 3.7e-13 78.2 80 57.5
Peaxi162Scf00016g00015 Petunia axillaris HOM05D007135 ORTHO05D008880 6.3e-13 77.4 49 77.6
Lsat_1_v5_gn_4_67341 Lactuca sativa HOM05D007135 ORTHO05D008880 1.1e-12 76.6 81 53.1
Glyma.06G007700 Glycine max HOM05D007135 ORTHO05D008880 1.8e-12 75.9 46 80.4
Haze_15927 Corylus avellana HOM05D018783 ORTHO05D008880 2.4e-12 75.5 64 65.6
Haze_08383 Corylus avellana HOM05D007135 ORTHO05D008880 5.3e-12 74.3 50 80.0
Zm00001eb103340 Zea mays HOM05D007135 ORTHO05D008880 3.4e-11 71.6 62 58.1
HPP92_008881 Vanilla planifolia HOM05D007135 ORTHO05D008880 4.5e-11 71.2 53 64.2
Atru.chr2.1821 Acer truncatum HOM05D034554 ORTHO05D000023 1.0e-10 70.1 49 75.5
RhsimUnG0003900 Rhododendron simsii HOM05D004431 ORTHO05D005053 4.7e-08 61.2 43 76.7
RhsimUnG0067300 Rhododendron simsii HOM05D004431 ORTHO05D005053 4.7e-08 61.2 43 76.7


User provided reference genes

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