Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr5.2995 Acer truncatum HOM05D007556 ORTHO05D002252 5.7e-66 255.4 129 100.0
Atru.chr5.2996 Acer truncatum HOM05D007556 ORTHO05D002252 1.1e-13 81.6 123 50.4
Ciclev10013967m.g Citrus clementina HOM05D060443 ORTHO05D002252 1.1e-13 81.6 110 49.1
Potri.009G114701 Populus trichocarpa HOM05D007556 ORTHO05D002252 2.5e-13 80.5 118 45.8
TWI79G0288 Tripterygium wilfordii HOM05D007556 ORTHO05D002252 1.3e-12 78.2 129 43.4
Potri.009G114800 Populus trichocarpa HOM05D007556 ORTHO05D002252 6.2e-12 75.9 150 40.0
Manes.07G098400 Manihot esculenta HOM05D007556 ORTHO05D002252 2.4e-11 73.9 126 42.1
TAR628G1474 Trochodendron aralioides HOM05D007556 ORTHO05D002252 9.0e-11 72.0 129 41.1
Gohir.A03G212200 Gossypium hirsutum HOM05D007227 ORTHO05D002252 5.8e-10 69.3 109 37.6
Gohir.D02G233600 Gossypium hirsutum HOM05D007227 ORTHO05D002252 7.6e-10 68.9 109 37.6
Duzib132G0033 Durio zibethinus HOM05D007556 ORTHO05D002252 1.3e-09 68.2 130 36.2
TAR628G0569 Trochodendron aralioides HOM05D007556 ORTHO05D002252 1.7e-09 67.8 100 45.0
Gorai.005G261600 Gossypium raimondii HOM05D007227 ORTHO05D002252 2.2e-09 67.4 108 37.0
Dinv23538 Davidia involucrata HOM05D007556 ORTHO05D002252 3.8e-09 66.6 99 43.4
Nitab4.5_0000959g0110 Nicotiana tabacum HOM05D007556 ORTHO05D002252 4.9e-09 66.2 116 40.5
QL11p043321 Quercus lobata HOM05D007556 ORTHO05D002252 4.9e-09 66.2 92 44.6
COL.COLO4_25910 Corchorus olitorius HOM05D007556 ORTHO05D002252 6.4e-09 65.9 136 38.2
Actinidia00509 Actinidia chinensis HOM05D007556 ORTHO05D002252 1.9e-08 64.3 79 46.8
CiPaw.06G136500 Carya illinoinensis HOM05D007556 ORTHO05D002252 3.2e-08 63.5 104 45.2
Phvul.011G046250 Phaseolus vulgaris HOM05D010359 ORTHO05D002252 3.2e-08 63.5 72 45.8
CSS0014637 Camellia sinensis var. sinensis HOM05D007556 ORTHO05D002252 4.2e-08 63.2 84 42.9
COL.COLO4_11793 Corchorus olitorius HOM05D007556 ORTHO05D002252 4.2e-08 63.2 145 36.6
COL.COLO4_25915 Corchorus olitorius HOM05D007556 ORTHO05D002252 5.4e-08 62.8 129 36.4
Gorai.012G152300 Gossypium raimondii HOM05D007556 ORTHO05D002252 7.1e-08 62.4 89 43.8
Aqoxy5G01653 Aquilegia oxysepala HOM05D007556 ORTHO05D002252 9.3e-08 62.0 131 35.9
COL.COLO4_03329 Corchorus olitorius HOM05D007556 ORTHO05D002252 9.3e-08 62.0 131 37.4
Lj3g0003579 Lotus japonicus HOM05D010359 ORTHO05D002252 1.6e-07 61.2 126 32.5
CiPaw.06G136300 Carya illinoinensis HOM05D007556 ORTHO05D002252 2.7e-07 60.5 123 37.4
Lj3g0013453 Lotus japonicus HOM05D010359 ORTHO05D002252 2.7e-07 60.5 113 33.6
Prupe.8G098600 Prunus persica HOM05D007556 ORTHO05D002252 3.5e-07 60.1 113 37.2
Rhsim11G0175400 Rhododendron simsii HOM05D007556 ORTHO05D002252 3.5e-07 60.1 89 41.6
Thecc.02G086700 Theobroma cacao HOM05D007556 ORTHO05D002252 3.5e-07 60.1 73 43.8
CSS0039349 Camellia sinensis var. sinensis HOM05D007556 ORTHO05D002252 6.0e-07 59.3 108 38.0
Oeu014344.1 Olea europaea HOM05D007556 ORTHO05D002252 6.0e-07 59.3 63 44.4
Cfa005014 Carpinus fangiana HOM05D007556 ORTHO05D002252 7.9e-07 58.9 80 43.8
COL.COLO4_11794 Corchorus olitorius HOM05D007556 ORTHO05D002252 1.0e-06 58.5 127 38.6
Gohir.D04G164160 Gossypium hirsutum HOM05D007556 ORTHO05D002252 1.0e-06 58.5 81 46.9
Medtr4g069810 Medicago truncatula HOM05D010359 ORTHO05D002252 1.0e-06 58.5 132 32.6
Thecc.02G037700 Theobroma cacao HOM05D007227 ORTHO05D002252 1.3e-06 58.2 118 35.6
GSVIVG01031946001 Vitis vinifera HOM05D007556 ORTHO05D002252 1.3e-06 58.2 115 34.8
Ciclev10030337m.g Citrus clementina HOM05D060443 ORTHO05D002252 1.8e-06 57.8 89 44.9
Rhsim11G0175600 Rhododendron simsii HOM05D007556 ORTHO05D002252 1.8e-06 57.8 89 40.4
Aqoxy2G01755 Aquilegia oxysepala HOM05D003825 ORTHO05D004491 2.3e-06 57.4 115 35.7
Cfa005016 Carpinus fangiana HOM05D007556 ORTHO05D002252 2.3e-06 57.4 80 42.5
Gohir.A04G122100 Gossypium hirsutum HOM05D007556 ORTHO05D002252 2.3e-06 57.4 89 40.4
Rhsim11G0175800 Rhododendron simsii HOM05D007556 ORTHO05D002252 2.3e-06 57.4 106 41.5
PGSC0003DMG400010828 Solanum tuberosum HOM05D007556 ORTHO05D002252 2.3e-06 57.4 44 59.1
Rhsim11G0175100 Rhododendron simsii HOM05D007556 ORTHO05D002252 3.9e-06 56.6 76 40.8
Solyc10g009150.3 Solanum lycopersicum HOM05D007556 ORTHO05D002252 3.9e-06 56.6 56 53.6
VMungo1127G0650 Vigna mungo HOM05D007556 ORTHO05D002252 3.9e-06 56.6 60 41.7
Nitab4.5_0002053g0110 Nicotiana tabacum HOM05D000024 ORTHO05D000007 5.1e-06 56.2 102 36.3
Prupe.8G099400 Prunus persica HOM05D007556 ORTHO05D002252 5.1e-06 56.2 63 46.0
Prupe.8G099600 Prunus persica HOM05D007556 ORTHO05D002252 5.1e-06 56.2 84 39.3
Ciclev10029484m.g Citrus clementina HOM05D007556 ORTHO05D002252 6.7e-06 55.8 101 40.6
COL.COLO4_17856 Corchorus olitorius HOM05D007227 ORTHO05D002252 6.7e-06 55.8 118 35.6
Dinv42073 Davidia involucrata HOM05D007227 ORTHO05D002252 6.7e-06 55.8 107 32.7
Prupe.8G098800 Prunus persica HOM05D007556 ORTHO05D002252 6.7e-06 55.8 63 47.6
Sopen10g004930 Solanum pennellii HOM05D007556 ORTHO05D002252 6.7e-06 55.8 56 53.6
COL.COLO4_37463 Corchorus olitorius HOM05D007556 ORTHO05D002252 8.7e-06 55.5 125 38.4
Manes.10G047933 Manihot esculenta HOM05D007556 ORTHO05D002252 8.7e-06 55.5 75 41.3
QL11p043287 Quercus lobata HOM05D007227 ORTHO05D002252 8.7e-06 55.5 117 35.0
vmacro02121 Vaccinium macrocarpon HOM05D007556 ORTHO05D002252 8.7e-06 55.5 89 39.3
GSVIVG01031943001 Vitis vinifera HOM05D007556 ORTHO05D002252 8.7e-06 55.5 92 34.8


User provided reference genes

Program Settings