Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr5.291 Acer truncatum HOM05D003566 ORTHO05D023212 1.8e-33 145.2 67 100.0
AUR62004195 Chenopodium quinoa HOM05D003566 ORTHO05D005288 1.2e-29 132.5 62 98.4
AUR62013650 Chenopodium quinoa HOM05D003566 ORTHO05D005288 1.2e-29 132.5 62 98.4
Thecc.01G378400 Theobroma cacao HOM05D003566 ORTHO05D005288 1.2e-29 132.5 62 98.4
COL.COLO4_12529 Corchorus olitorius HOM05D003566 ORTHO05D005288 3.5e-29 131.0 62 96.8
arahy.Tifrunner.gnm1.ann1.9A4JNA Arachis hypogaea HOM05D003566 ORTHO05D005288 4.6e-29 130.6 62 95.2
arahy.Tifrunner.gnm1.ann1.VTP8RR Arachis hypogaea HOM05D003566 ORTHO05D005288 4.6e-29 130.6 62 95.2
FAN06G2304 Fragaria x ananassa HOM05D003566 ORTHO05D005288 4.6e-29 130.6 62 95.2
FAN06G3189 Fragaria x ananassa HOM05D003566 ORTHO05D005288 4.6e-29 130.6 62 95.2
Actinidia12680 Actinidia chinensis HOM05D003566 ORTHO05D005288 6.0e-29 130.2 62 96.8
Duzib133G0428 Durio zibethinus HOM05D003566 ORTHO05D005288 6.0e-29 130.2 62 96.8
Duzib138G1163 Durio zibethinus HOM05D003566 ORTHO05D005288 6.0e-29 130.2 62 96.8
Duzib138G1849 Durio zibethinus HOM05D003566 ORTHO05D005288 6.0e-29 130.2 62 96.8
ECA236G4962 Erigeron canadensis HOM05D003566 ORTHO05D005288 6.0e-29 130.2 62 96.8
HanXRQChr16g0520001 Helianthus annuus HOM05D003566 ORTHO05D005288 6.0e-29 130.2 62 96.8
Hma1.2p1_0301F.1_g118610 Hydrangea macrophylla HOM05D003566 ORTHO05D005288 6.0e-29 130.2 62 96.8
Nitab4.5_0001329g0120 Nicotiana tabacum HOM05D003566 ORTHO05D005288 6.0e-29 130.2 62 95.2
Oeu011923.1 Olea europaea HOM05D003566 ORTHO05D005288 6.0e-29 130.2 62 96.8
Oeu055501.1 Olea europaea HOM05D003566 ORTHO05D005288 6.0e-29 130.2 62 96.8
Solyc05g050980.3 Solanum lycopersicum HOM05D003566 ORTHO05D005288 6.0e-29 130.2 62 95.2
Sopen05g029450 Solanum pennellii HOM05D003566 ORTHO05D005288 6.0e-29 130.2 62 95.2
PGSC0003DMG400007018 Solanum tuberosum HOM05D003566 ORTHO05D005288 6.0e-29 130.2 62 95.2
MBI04_g30227_MAGBIO Magnolia biondii HOM05D003566 ORTHO05D005288 7.8e-29 129.8 62 95.2
Peaxi162Scf00959g00022 Petunia axillaris HOM05D003566 ORTHO05D005288 7.8e-29 129.8 62 95.2
Prupe.2G143700 Prunus persica HOM05D003566 ORTHO05D005288 7.8e-29 129.8 62 95.2
CDE12G0626 Ceratophyllum demersum HOM05D003566 ORTHO05D005288 1.0e-28 129.4 62 91.9
MD10G1038600 Malus domestica HOM05D003566 ORTHO05D023212 1.0e-28 129.4 62 93.5
Eucgr.D02465 Eucalyptus grandis HOM05D003566 ORTHO05D005288 1.3e-28 129.0 62 95.2
FAN10G2501 Fragaria x ananassa HOM05D003566 ORTHO05D005288 1.3e-28 129.0 62 93.5
HanXRQChr04g0122731 Helianthus annuus HOM05D003566 ORTHO05D005288 1.3e-28 129.0 62 95.2
Nn1g01139 Nelumbo nucifera HOM05D003566 ORTHO05D005288 1.3e-28 129.0 62 95.2
PSO782G1824 Papaver somniferum HOM05D003566 ORTHO05D005288 1.3e-28 129.0 62 95.2
PSO832G3659 Papaver somniferum HOM05D003566 ORTHO05D005288 1.3e-28 129.0 62 95.2
Rhsim01G0149300 Rhododendron simsii HOM05D003566 ORTHO05D005288 1.3e-28 129.0 62 95.2
GSVIVG01027673001 Vitis vinifera HOM05D003566 ORTHO05D005288 1.3e-28 129.0 62 95.2
Aqoxy7G00661 Aquilegia oxysepala HOM05D003566 ORTHO05D005288 1.7e-28 128.6 62 93.5
CANSAT56G0647 Cannabis sativa HOM05D003566 ORTHO05D005288 1.7e-28 128.6 62 93.5
CANSAT56G3470 Cannabis sativa HOM05D003566 ORTHO05D005288 1.7e-28 128.6 62 93.5
Cfa001747 Carpinus fangiana HOM05D003566 ORTHO05D005288 1.7e-28 128.6 62 93.5
Cc02_g24040 Coffea canephora HOM05D003566 ORTHO05D005288 1.7e-28 128.6 62 93.5
ECA234G2802 Erigeron canadensis HOM05D003566 ORTHO05D007485 1.7e-28 128.6 62 95.2
ECA234G2985 Erigeron canadensis HOM05D003566 ORTHO05D005288 1.7e-28 128.6 62 95.2
Glyma.01G139600 Glycine max HOM05D003566 ORTHO05D005288 1.7e-28 128.6 62 95.2
Glyma.03G027400 Glycine max HOM05D003566 ORTHO05D005288 1.7e-28 128.6 62 95.2
Gohir.A12G101500 Gossypium hirsutum HOM05D003566 ORTHO05D005288 1.7e-28 128.6 62 95.2
Gorai.008G113600 Gossypium raimondii HOM05D003566 ORTHO05D005288 1.7e-28 128.6 62 95.2
RcHm_v2.0_Chr1g0349971 Rosa chinensis HOM05D003566 ORTHO05D005288 1.7e-28 128.6 62 95.2
vmacro21022 Vaccinium macrocarpon HOM05D003566 ORTHO05D005288 1.7e-28 128.6 62 93.5
MSTRG.4899 Avicennia marina HOM05D003566 ORTHO05D005288 2.3e-28 128.3 62 93.5
Dinv43695 Davidia involucrata HOM05D003566 ORTHO05D005288 2.3e-28 128.3 62 95.2
FvH4_7g11530 Fragaria vesca HOM05D003566 ORTHO05D005288 2.3e-28 128.3 62 93.5
FAN01G1013 Fragaria x ananassa HOM05D003566 ORTHO05D005288 2.3e-28 128.3 62 93.5
FAN03G0287 Fragaria x ananassa HOM05D003566 ORTHO05D005288 2.3e-28 128.3 62 93.5
MD07G1119600 Malus domestica HOM05D003566 ORTHO05D005288 2.3e-28 128.3 62 93.5
Nitab4.5_0003912g0050 Nicotiana tabacum HOM05D003566 ORTHO05D005288 2.3e-28 128.3 62 93.5
Hund17028 Selenicereus undatus HOM05D003566 ORTHO05D005288 2.3e-28 128.3 62 95.2
unitig_26.g8900 Utricularia gibba HOM05D003566 ORTHO05D005288 2.3e-28 128.3 62 91.9
CDE04G0743 Ceratophyllum demersum HOM05D003566 ORTHO05D005288 3.0e-28 127.9 62 90.3
ClCG05G002340 Citrullus lanatus HOM05D003566 ORTHO05D005288 3.0e-28 127.9 62 93.5
CsaV3_3G009780 Cucumis sativus L. HOM05D003566 ORTHO05D005288 3.0e-28 127.9 62 93.5
DCAR_008553 Daucus carota HOM05D003566 ORTHO05D005288 3.0e-28 127.9 62 93.5
Lj7C530T15 Lonicera japonica HOM05D003566 ORTHO05D005288 3.0e-28 127.9 62 95.2
Rhsim07G0028700 Rhododendron simsii HOM05D003566 ORTHO05D005288 3.0e-28 127.9 62 93.5
vmacro13413 Vaccinium macrocarpon HOM05D003566 ORTHO05D005288 3.0e-28 127.9 62 95.2
Medtr4g024620 Medicago truncatula HOM05D003566 ORTHO05D005288 3.9e-28 127.5 62 93.5
Psat0s4330g0080 Pisum sativum HOM05D003566 ORTHO05D005288 3.9e-28 127.5 62 93.5
TPR.G31328 Trifolium pratense HOM05D003566 ORTHO05D005288 3.9e-28 127.5 62 93.5
VMungo0331G1999 Vigna mungo HOM05D003566 ORTHO05D005288 3.9e-28 127.5 62 93.5
EL10Ac1g00874 Beta vulgaris HOM05D003566 ORTHO05D005288 5.1e-28 127.1 62 95.2
CSS0046086 Camellia sinensis var. sinensis HOM05D003566 ORTHO05D005288 5.1e-28 127.1 62 95.2
Gohir.D12G104500 Gossypium hirsutum HOM05D003566 ORTHO05D005288 5.1e-28 127.1 62 93.5
Lj3g0026165 Lotus japonicus HOM05D003566 ORTHO05D005288 5.1e-28 127.1 62 91.9
MD02G1207300 Malus domestica HOM05D003566 ORTHO05D005288 5.1e-28 127.1 62 91.9
Cpa.g.sc18.106 Carica papaya HOM05D003566 ORTHO05D005288 6.6e-28 126.7 62 93.5
Lsat_1_v5_gn_4_43461 Lactuca sativa HOM05D003566 ORTHO05D005288 6.6e-28 126.7 62 93.5
Phvul.010G082200 Phaseolus vulgaris HOM05D003566 ORTHO05D005288 6.6e-28 126.7 62 93.5
Lalb_Chr12g0208181 Lupinus albus HOM05D003566 ORTHO05D005288 8.7e-28 126.3 62 91.9
Sed0010249 Sechium edule HOM05D003566 ORTHO05D005288 8.7e-28 126.3 62 91.9
GSVIVG01027670001 Vitis vinifera HOM05D003566 ORTHO05D005288 8.7e-28 126.3 62 93.5
Ciclev10019734m.g Citrus clementina HOM05D003566 ORTHO05D005288 1.1e-27 125.9 62 93.5
MELO3C006199.2 Cucumis melo HOM05D003566 ORTHO05D005288 1.1e-27 125.9 62 91.9
Dinv32368 Davidia involucrata HOM05D003566 ORTHO05D005288 1.1e-27 125.9 62 93.5
TAR374G0275 Trochodendron aralioides HOM05D003566 ORTHO05D005288 1.1e-27 125.9 62 93.5
ATR0757G160 Amborella trichopoda HOM05D003566 ORTHO05D005288 1.5e-27 125.6 62 91.9
QL08p052721 Quercus lobata HOM05D003566 ORTHO05D005288 1.5e-27 125.6 62 91.9
Actinidia12250 Actinidia chinensis HOM05D003566 ORTHO05D005288 1.9e-27 125.2 62 93.5
MSTRG.17176 Avicennia marina HOM05D003566 ORTHO05D005288 1.9e-27 125.2 62 91.9
CiPaw.01G263300 Carya illinoinensis HOM05D003566 ORTHO05D005288 1.9e-27 125.2 62 93.5
Lsat_1_v5_gn_7_9680 Lactuca sativa HOM05D003566 ORTHO05D005288 1.9e-27 125.2 62 93.5
Lalb_Chr07g0189911 Lupinus albus HOM05D003566 ORTHO05D005288 1.9e-27 125.2 62 91.9
Nitab4.5_0000457g0110 Nicotiana tabacum HOM05D003566 ORTHO05D005288 1.9e-27 125.2 62 91.9
Sabra02G0114000 Salix brachista HOM05D003566 ORTHO05D005288 1.9e-27 125.2 62 91.9
Sabra14G0047900 Salix brachista HOM05D003566 ORTHO05D005288 1.9e-27 125.2 62 91.9
Manes.01G266800 Manihot esculenta HOM05D003566 ORTHO05D005288 2.5e-27 124.8 62 91.9
TWI59G0119 Tripterygium wilfordii HOM05D003566 ORTHO05D005288 3.3e-27 124.4 62 91.9
Ca_19954_v3 Cicer arietinum L. HOM05D003566 ORTHO05D005288 4.3e-27 124.0 62 90.3
HPP92_020661 Vanilla planifolia HOM05D003566 ORTHO05D005288 5.6e-27 123.6 62 88.7
Manes.05G046900 Manihot esculenta HOM05D003566 ORTHO05D005288 7.3e-27 123.2 62 88.7
Peaxi162Scf00013g03114 Petunia axillaris HOM05D003566 ORTHO05D005288 7.3e-27 123.2 62 90.3
Gohir.D07G152400 Gossypium hirsutum HOM05D003566 ORTHO05D005288 9.6e-27 122.9 62 90.3
Gorai.001G174400 Gossypium raimondii HOM05D003566 ORTHO05D005288 9.6e-27 122.9 62 90.3
QL08p052732 Quercus lobata HOM05D003566 ORTHO05D005288 9.6e-27 122.9 62 90.3
Lj9A568G56 Lonicera japonica HOM05D003566 ORTHO05D005288 1.3e-26 122.5 62 90.3
PGR004G2250 Punica granatum HOM05D003566 ORTHO05D005288 1.3e-26 122.5 62 87.1
SalBow5G0834 Salvia bowleyana HOM05D003566 ORTHO05D005288 1.3e-26 122.5 62 91.9
Ah.05g174400 Amaranthus hybridus HOM05D003566 ORTHO05D005288 1.6e-26 122.1 62 91.9
Gohir.A07G146300 Gossypium hirsutum HOM05D003566 ORTHO05D005288 1.6e-26 122.1 62 91.9
Nitab4.5_0005272g0040 Nicotiana tabacum HOM05D003566 ORTHO05D005288 1.6e-26 122.1 62 90.3
Potri.002G146400 Populus trichocarpa HOM05D003566 ORTHO05D005288 1.6e-26 122.1 62 90.3
Solyc01g091190.3 Solanum lycopersicum HOM05D003566 ORTHO05D005288 1.6e-26 122.1 62 90.3
PGSC0003DMG400026006 Solanum tuberosum HOM05D003566 ORTHO05D005288 1.6e-26 122.1 62 90.3
CAN.G388.31 Capsicum annuum HOM05D003566 ORTHO05D005288 2.1e-26 121.7 62 88.7
SGA_v2.0_scaffold95G28906 Striga asiatica HOM05D003566 ORTHO05D005288 2.1e-26 121.7 66 83.3
THA.LOC104817242 Tarenaya hassleriana HOM05D003566 ORTHO05D005288 2.1e-26 121.7 62 90.3
Os06g0133900 Oryza sativa ssp. japonica HOM05D003566 ORTHO05D005288 2.8e-26 121.3 62 90.3
Sopen01g036940 Solanum pennellii HOM05D003566 ORTHO05D005288 4.8e-26 120.6 62 88.7
Zm00001eb378020 Zea mays HOM05D003566 ORTHO05D005288 6.2e-26 120.2 62 90.3
AL1G55650 Arabidopsis lyrata HOM05D003566 ORTHO05D005288 8.1e-26 119.8 62 87.1
Gorai.008G113800 Gossypium raimondii HOM05D003566 ORTHO05D005288 1.4e-25 119.0 62 88.7
AT2G45300 Arabidopsis thaliana HOM05D003566 ORTHO05D005288 1.8e-25 118.6 62 85.5
Potri.014G068300 Populus trichocarpa HOM05D003566 ORTHO05D005288 1.8e-25 118.6 62 88.7
PSO478G4413 Papaver somniferum HOM05D003566 ORTHO05D005288 2.4e-25 118.2 62 87.1
AL4G44400 Arabidopsis lyrata HOM05D003566 ORTHO05D005288 3.1e-25 117.9 62 85.5
AT1G48860 Arabidopsis thaliana HOM05D003566 ORTHO05D005288 3.1e-25 117.9 62 85.5
CARHR140500 Cardamine hirsuta HOM05D003566 ORTHO05D005288 3.1e-25 117.9 62 87.1
SMO137G0336 Selaginella moellendorffii HOM05D003566 ORTHO05D005288 4.0e-25 117.5 62 82.3
Carub.0004s2793 Capsella rubella HOM05D003566 ORTHO05D005288 5.3e-25 117.1 62 87.1
C03p30000 Brassica napus HOM05D003566 ORTHO05D005288 6.9e-25 116.7 62 87.1
BcaB01g03274 Brassica carinata HOM05D003566 ORTHO05D005288 9.0e-25 116.3 62 87.1
BcaC01g05142 Brassica carinata HOM05D003566 ORTHO05D005288 9.0e-25 116.3 62 87.1
A03p25160 Brassica napus HOM05D003566 ORTHO05D005288 9.0e-25 116.3 62 87.1
BraA03t11716Z Brassica rapa HOM05D003566 ORTHO05D005288 9.0e-25 116.3 62 87.1
Thhalv10001404m.g Eutrema salsugineum HOM05D003566 ORTHO05D005288 1.2e-24 115.9 62 87.1
Sp5g02490 Schrenkiella parvula HOM05D003566 ORTHO05D005288 1.2e-24 115.9 62 85.5
A04p33720 Brassica napus HOM05D003566 ORTHO05D005288 2.0e-24 115.2 62 85.5
C04p71450 Brassica napus HOM05D003566 ORTHO05D005288 2.0e-24 115.2 62 85.5
BolC4t28653H Brassica oleracea HOM05D003566 ORTHO05D005288 2.0e-24 115.2 62 85.5
BraA04t18834Z Brassica rapa HOM05D003566 ORTHO05D005288 2.0e-24 115.2 62 85.5
Sp4g27320 Schrenkiella parvula HOM05D003566 ORTHO05D005288 2.6e-24 114.8 62 85.5
CARHR171150 Cardamine hirsuta HOM05D003566 ORTHO05D005288 3.4e-24 114.4 62 83.9
unitig_749.g14377 Utricularia gibba HOM05D003566 ORTHO05D023212 7.6e-24 113.2 85 67.1
unitig_76.g29084 Utricularia gibba HOM05D003566 ORTHO05D005288 7.6e-24 113.2 85 67.1
Aa31LG10G15010 Aethionema arabicum HOM05D003566 ORTHO05D005288 2.2e-23 111.7 62 83.9
PSO832G1516 Papaver somniferum HOM05D002084 ORTHO05D002031 2.9e-23 111.3 54 92.6
A05p05320 Brassica napus HOM05D003566 ORTHO05D003430 3.8e-23 110.9 61 83.6
BraA05t19503Z Brassica rapa HOM05D003566 ORTHO05D005288 3.8e-23 110.9 61 83.6
TWI14G0817 Tripterygium wilfordii HOM05D003566 ORTHO05D005288 8.4e-23 109.8 90 63.3
BcaB02g08943 Brassica carinata HOM05D003566 ORTHO05D023212 1.1e-22 109.4 63 84.1
SGA_v2.0_scaffold153G36998 Striga asiatica HOM05D003566 ORTHO05D005288 3.5e-21 104.4 56 87.5
BolC3t15347H Brassica oleracea HOM05D003566 ORTHO05D005288 7.9e-21 103.2 85 63.5
AUR62038008 Chenopodium quinoa HOM05D003566 ORTHO05D018971 1.3e-20 102.4 58 81.0
CBR_g26047 Chara braunii HOM05D003566 ORTHO05D005288 1.8e-20 102.1 62 74.2
AagrBONN_evm.TU.Sc2ySwM_117.2264 Anthoceros agrestis HOM05D003566 ORTHO05D005288 2.3e-20 101.7 62 74.2
Mapoly0034s0104 Marchantia polymorpha HOM05D003566 ORTHO05D005288 3.9e-20 100.9 62 75.8
Pp3c20_17090 Physcomitrium patens HOM05D003566 ORTHO05D005288 7.4e-19 96.7 62 69.4
Gorai.008G113700 Gossypium raimondii HOM05D003566 ORTHO05D005288 9.6e-19 96.3 52 86.5
Pp3c23_11380 Physcomitrium patens HOM05D003566 ORTHO05D005288 3.6e-18 94.4 62 66.1
MCO12G366 Micromonas commoda HOM05D003566 ORTHO05D005288 1.1e-17 92.8 65 72.3
Cre03.g181300 Chlamydomonas reinhardtii HOM05D003566 ORTHO05D005288 2.4e-17 91.7 68 70.6
PRCOL_00003336 Prasinoderma coloniale HOM05D003566 ORTHO05D005288 2.7e-13 78.2 63 63.5
Gohir.D12G104550 Gossypium hirsutum HOM05D003566 ORTHO05D005288 2.3e-12 75.1 37 91.9
Sed0009137 Sechium edule HOM05D003566 ORTHO05D005288 2.5e-11 71.6 33 93.9


User provided reference genes

Program Settings