Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr5.2787 Acer truncatum HOM05D008798 ORTHO05D011016 6.8e-226 786.9 384 100.0
Ciclev10015548m.g Citrus clementina HOM05D008798 ORTHO05D011016 2.9e-136 489.2 387 64.1
Duzib160G0760 Durio zibethinus HOM05D008798 ORTHO05D011016 2.9e-136 489.2 395 61.5
Potri.001G081100 Populus trichocarpa HOM05D008798 ORTHO05D011016 3.3e-132 475.7 391 62.9
Potri.003G149300 Populus trichocarpa HOM05D008798 ORTHO05D011016 7.4e-132 474.6 391 62.4
Cfa000742 Carpinus fangiana HOM05D008798 ORTHO05D011016 6.3e-131 471.5 382 63.4
Gohir.D10G047800 Gossypium hirsutum HOM05D008798 ORTHO05D011016 5.9e-129 464.9 389 59.1
Gorai.011G050900 Gossypium raimondii HOM05D008798 ORTHO05D011016 1.3e-128 463.8 389 58.9
CiPaw.09G150900 Carya illinoinensis HOM05D008798 ORTHO05D011016 2.7e-126 456.1 397 59.7
Gohir.A10G046500 Gossypium hirsutum HOM05D008798 ORTHO05D011016 3.0e-125 452.6 397 57.2
Manes.16G054300 Manihot esculenta HOM05D008798 ORTHO05D011016 9.7e-124 447.6 394 58.6
GSVIVG01013644001 Vitis vinifera HOM05D008798 ORTHO05D011016 1.9e-119 433.3 390 58.2
TAR626G1932 Trochodendron aralioides HOM05D008798 ORTHO05D011016 3.2e-119 432.6 388 58.5
TWI09G1085 Tripterygium wilfordii HOM05D008798 ORTHO05D011016 2.7e-118 429.5 385 57.9
Dinv15940 Davidia involucrata HOM05D008798 ORTHO05D011016 3.6e-118 429.1 387 56.8
CSS0041632 Camellia sinensis var. sinensis HOM05D008798 ORTHO05D011016 5.5e-111 405.2 356 59.3
Dinv15941 Davidia involucrata HOM05D008798 ORTHO05D011016 5.2e-109 398.7 387 54.0
Eucgr.E04362 Eucalyptus grandis HOM05D008798 ORTHO05D011016 7.0e-106 388.3 370 52.7
Eucgr.E02024 Eucalyptus grandis HOM05D008798 ORTHO05D011016 1.6e-105 387.1 370 52.7
DCAR_003802 Daucus carota HOM05D008798 ORTHO05D011016 9.8e-100 367.9 388 50.3
vmacro03488 Vaccinium macrocarpon HOM05D008798 ORTHO05D011016 3.9e-96 355.9 386 52.1
Rhsim13G0127600 Rhododendron simsii HOM05D008798 ORTHO05D011016 2.8e-94 349.7 412 49.8
Thecc.06G136100 Theobroma cacao HOM05D008798 ORTHO05D011016 2.9e-91 339.7 261 64.4
HPP92_012287 Vanilla planifolia HOM05D006462 ORTHO05D008067 1.3e-83 314.3 396 44.7
ATR0763G057 Amborella trichopoda HOM05D008798 ORTHO05D011016 4.2e-66 256.1 261 50.2
SEGI_41343 Sequoiadendron giganteum HOM05D008798 ORTHO05D011016 6.6e-64 248.8 347 38.9
Zm00001eb213680 Zea mays HOM05D008798 ORTHO05D011016 1.5e-63 247.7 384 38.3
Hma1.2p1_1159F.1_g262420 Hydrangea macrophylla HOM05D008798 ORTHO05D011016 1.5e-52 211.1 230 53.0
Os03g0777600 Oryza sativa ssp. japonica HOM05D008798 ORTHO05D011016 7.6e-52 208.8 281 38.4
Zm00001eb123420 Zea mays HOM05D008798 ORTHO05D011016 1.8e-40 171.0 207 40.6
Haze_05995 Corylus avellana HOM05D008798 ORTHO05D011016 2.2e-35 154.1 91 78.0
SMO367G1240 Selaginella moellendorffii HOM05D009232 ORTHO05D013348 1.2e-33 148.3 325 31.1
Pp3c9_12300 Physcomitrium patens HOM05D008798 ORTHO05D011016 1.6e-33 147.9 373 29.0
Pp3c9_15430 Physcomitrium patens HOM05D008798 ORTHO05D011016 3.6e-33 146.7 379 29.3
Mapoly0044s0079 Marchantia polymorpha HOM05D008798 ORTHO05D011016 4.3e-31 139.8 396 28.3
Haze_05996 Corylus avellana HOM05D008798 ORTHO05D011016 9.7e-31 138.7 145 54.5
AagrBONN_evm.TU.Sc2ySwM_344.179 Anthoceros agrestis HOM05D008798 ORTHO05D011016 4.1e-29 133.3 298 30.2
Pp3c20_17720 Physcomitrium patens HOM05D008798 ORTHO05D011016 1.6e-25 121.3 356 26.4
Pp3c23_9830 Physcomitrium patens HOM05D008798 ORTHO05D011016 3.9e-24 116.7 283 26.9
CBR_g6349 Chara braunii HOM05D000186 ORTHO05D000347 3.6e-17 93.6 275 26.5
SEGI_25661 Sequoiadendron giganteum HOM05D008798 ORTHO05D011016 1.8e-16 91.3 105 43.8
Zm00001eb431530 Zea mays HOM05D008798 ORTHO05D011016 8.8e-16 89.0 105 41.0
MBI01_g35739_MAGBIO Magnolia biondii HOM05D008798 ORTHO05D000004 2.7e-09 67.4 57 54.4


User provided reference genes

Program Settings