Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr5.2725 Acer truncatum HOM05D004394 ORTHO05D005208 6.7e-66 253.8 124 100.0
Atru.chr13.1186 Acer truncatum HOM05D004394 ORTHO05D005208 4.9e-61 237.7 124 92.7
Ciclev10003351m.g Citrus clementina HOM05D004394 ORTHO05D005208 6.0e-59 230.7 124 88.7
Lsat_1_v5_gn_2_108521 Lactuca sativa HOM05D004394 ORTHO05D005208 5.7e-57 224.2 124 84.7
HanXRQChr07g0194691 Helianthus annuus HOM05D004394 ORTHO05D005208 7.4e-57 223.8 124 83.1
HanXRQChr04g0126451 Helianthus annuus HOM05D004394 ORTHO05D005208 3.7e-56 221.5 124 82.3
ECA238G4620 Erigeron canadensis HOM05D004394 ORTHO05D005208 1.1e-55 219.9 124 82.3
MELO3C011026.2 Cucumis melo HOM05D004394 ORTHO05D005208 6.9e-55 217.2 124 82.3
Manes.08G094000 Manihot esculenta HOM05D004394 ORTHO05D005208 6.9e-55 217.2 124 85.5
Migut.C01173 Erythranthe guttata HOM05D004394 ORTHO05D005208 1.2e-54 216.5 124 84.7
CsaV3_2G029680 Cucumis sativus L. HOM05D004394 ORTHO05D005208 2.0e-54 215.7 124 82.3
SGA_v2.0_scaffold24G10492 Striga asiatica HOM05D004394 ORTHO05D005208 3.4e-54 214.9 124 82.3
THA.LOC104800150 Tarenaya hassleriana HOM05D004394 ORTHO05D005208 3.4e-54 214.9 125 81.6
Oeu046302.1 Olea europaea HOM05D004394 ORTHO05D005208 5.8e-54 214.2 124 83.1
ClCG08G011100 Citrullus lanatus HOM05D004394 ORTHO05D005208 7.6e-54 213.8 124 81.5
MD08G1182900 Malus domestica HOM05D004394 ORTHO05D005208 1.0e-53 213.4 124 83.1
BcaC06g34947 Brassica carinata HOM05D004394 ORTHO05D005208 1.3e-53 213.0 126 80.2
BolC7t42673H Brassica oleracea HOM05D004394 ORTHO05D005208 1.3e-53 213.0 126 80.2
MBI05_g37052_MAGBIO Magnolia biondii HOM05D004394 ORTHO05D005208 1.3e-53 213.0 124 81.5
Sp1g19780 Schrenkiella parvula HOM05D004394 ORTHO05D005208 1.7e-53 212.6 126 81.0
Eucgr.D01128 Eucalyptus grandis HOM05D004394 ORTHO05D005208 2.2e-53 212.2 124 83.1
Prupe.1G517100 Prunus persica HOM05D004394 ORTHO05D005208 2.2e-53 212.2 124 83.1
BraA07t29204Z Brassica rapa HOM05D004394 ORTHO05D005208 3.8e-53 211.5 126 79.4
DCAR_008736 Daucus carota HOM05D004394 ORTHO05D005208 3.8e-53 211.5 124 77.4
Thecc.08G106700 Theobroma cacao HOM05D004394 ORTHO05D005208 3.8e-53 211.5 125 81.6
CARHR022650 Cardamine hirsuta HOM05D004394 ORTHO05D005208 5.0e-53 211.1 125 79.2
Oeu012929.1 Olea europaea HOM05D004394 ORTHO05D005208 5.0e-53 211.1 124 81.5
C07p21470 Brassica napus HOM05D004394 ORTHO05D005208 6.5e-53 210.7 124 79.8
Cc10_g07190 Coffea canephora HOM05D004394 ORTHO05D005208 6.5e-53 210.7 124 80.6
QL03p027611 Quercus lobata HOM05D004394 ORTHO05D005208 6.5e-53 210.7 123 78.9
Duzib041G0085 Durio zibethinus HOM05D004394 ORTHO05D005208 8.4e-53 210.3 125 81.6
A07p14580 Brassica napus HOM05D004394 ORTHO05D005208 1.9e-52 209.1 125 79.2
Cpa.g.sc53.145 Carica papaya HOM05D004394 ORTHO05D005208 1.9e-52 209.1 124 80.6
Duzib093G1861 Durio zibethinus HOM05D004394 ORTHO05D005208 1.9e-52 209.1 125 80.8
QL12p036785 Quercus lobata HOM05D004394 ORTHO05D005208 1.9e-52 209.1 123 80.5
Duzib093G0332 Durio zibethinus HOM05D004394 ORTHO05D005208 2.5e-52 208.8 125 80.8
Sabra02G0076100 Salix brachista HOM05D004394 ORTHO05D005208 2.5e-52 208.8 124 79.8
GSVIVG01032524001 Vitis vinifera HOM05D004394 ORTHO05D005208 2.5e-52 208.8 124 78.2
CSS0017732 Camellia sinensis var. sinensis HOM05D004394 ORTHO05D005208 3.2e-52 208.4 124 78.2
Actinidia10324 Actinidia chinensis HOM05D004394 ORTHO05D005208 4.2e-52 208.0 124 78.2
CANSAT80G0901 Cannabis sativa HOM05D004394 ORTHO05D005208 4.2e-52 208.0 124 79.0
Dinv36547 Davidia involucrata HOM05D004394 ORTHO05D005208 4.2e-52 208.0 122 80.3
Nitab4.5_0000232g0200 Nicotiana tabacum HOM05D004394 ORTHO05D005208 4.2e-52 208.0 124 80.6
BcaB07g32248 Brassica carinata HOM05D004394 ORTHO05D005208 5.5e-52 207.6 129 77.5
Nn2g12152 Nelumbo nucifera HOM05D004394 ORTHO05D005208 5.5e-52 207.6 124 78.2
Potri.002G096600 Populus trichocarpa HOM05D004394 ORTHO05D005208 5.5e-52 207.6 124 79.0
PGR042G0728 Punica granatum HOM05D004394 ORTHO05D005208 5.5e-52 207.6 124 79.0
Gohir.D06G036200 Gossypium hirsutum HOM05D004394 ORTHO05D005208 7.2e-52 207.2 125 79.2
Gorai.010G040200 Gossypium raimondii HOM05D004394 ORTHO05D005208 7.2e-52 207.2 125 79.2
Peaxi162Scf00041g00179 Petunia axillaris HOM05D004394 ORTHO05D005208 7.2e-52 207.2 124 79.0
THA.LOC104809715 Tarenaya hassleriana HOM05D004394 ORTHO05D005208 7.2e-52 207.2 125 78.4
Potri.005G165000 Populus trichocarpa HOM05D004394 ORTHO05D005208 1.2e-51 206.5 124 79.0
Sopen04g029330 Solanum pennellii HOM05D004394 ORTHO05D005208 1.2e-51 206.5 124 80.6
TWI36G1364 Tripterygium wilfordii HOM05D004394 ORTHO05D005208 1.6e-51 206.1 124 75.8
Actinidia30773 Actinidia chinensis HOM05D004394 ORTHO05D005208 2.1e-51 205.7 123 78.0
Aqoxy6G00782 Aquilegia oxysepala HOM05D004394 ORTHO05D005208 2.1e-51 205.7 124 78.2
FvH4_5g37330 Fragaria vesca HOM05D004394 ORTHO05D005208 2.1e-51 205.7 124 80.6
FAN18G2812 Fragaria x ananassa HOM05D004394 ORTHO05D005208 2.1e-51 205.7 124 80.6
PGSC0003DMG400006413 Solanum tuberosum HOM05D004394 ORTHO05D005208 2.1e-51 205.7 124 80.6
CARHR071660 Cardamine hirsuta HOM05D004394 ORTHO05D005208 2.7e-51 205.3 125 76.8
FAN08G2022 Fragaria x ananassa HOM05D004394 ORTHO05D005208 2.7e-51 205.3 124 80.6
SalBow7G3516 Salvia bowleyana HOM05D004394 ORTHO05D005208 2.7e-51 205.3 124 79.0
Gohir.A06G035600 Gossypium hirsutum HOM05D004394 ORTHO05D005208 3.5e-51 204.9 125 78.4
TAR376G0181 Trochodendron aralioides HOM05D004394 ORTHO05D005208 3.5e-51 204.9 124 76.6
A09p42510 Brassica napus HOM05D004394 ORTHO05D005208 4.6e-51 204.5 128 75.8
BraA09t39727Z Brassica rapa HOM05D004394 ORTHO05D005208 4.6e-51 204.5 128 75.8
Nn5g30107 Nelumbo nucifera HOM05D004394 ORTHO05D005208 4.6e-51 204.5 123 76.4
BcaC05g26154 Brassica carinata HOM05D004394 ORTHO05D005208 6.1e-51 204.1 127 75.6
C05p21390 Brassica napus HOM05D004394 ORTHO05D005208 6.1e-51 204.1 127 75.6
AL1G35720 Arabidopsis lyrata HOM05D004394 ORTHO05D005208 7.9e-51 203.8 125 76.0
Cpa.g.sc36.132 Carica papaya HOM05D004394 ORTHO05D005208 7.9e-51 203.8 124 79.8
Ca_20267_v3 Cicer arietinum L. HOM05D004394 ORTHO05D005208 7.9e-51 203.8 124 78.2
Haze_22268 Corylus avellana HOM05D004394 ORTHO05D005208 7.9e-51 203.8 124 79.0
VMungo0720G0524 Vigna mungo HOM05D004394 ORTHO05D005208 7.9e-51 203.8 122 79.5
Carub.0001s2182 Capsella rubella HOM05D004394 ORTHO05D005208 1.0e-50 203.4 125 76.0
SalBow7G2639 Salvia bowleyana HOM05D004394 ORTHO05D005208 1.0e-50 203.4 124 78.2
Sed0012623 Sechium edule HOM05D004394 ORTHO05D005208 1.0e-50 203.4 124 75.8
TAR628G0041 Trochodendron aralioides HOM05D004394 ORTHO05D005208 1.0e-50 203.4 124 75.8
AT1G22270 Arabidopsis thaliana HOM05D004394 ORTHO05D005208 1.3e-50 203.0 125 76.0
CANSAT80G2869 Cannabis sativa HOM05D004394 ORTHO05D005208 1.3e-50 203.0 124 76.6
Ca_08121_v3 Cicer arietinum L. HOM05D004394 ORTHO05D005208 1.3e-50 203.0 124 78.2
FAN13G1242 Fragaria x ananassa HOM05D004394 ORTHO05D005208 1.3e-50 203.0 124 79.8
Aa31LG7G6210 Aethionema arabicum HOM05D004394 ORTHO05D005208 1.8e-50 202.6 125 78.4
Psat2g179880 Pisum sativum HOM05D004394 ORTHO05D005208 1.8e-50 202.6 124 78.2
Glyma.20G173300 Glycine max HOM05D004394 ORTHO05D005208 2.3e-50 202.2 124 77.4
Lalb_Chr08g0242051 Lupinus albus HOM05D004394 ORTHO05D005208 2.3e-50 202.2 124 79.0
Phvul.007G087400 Phaseolus vulgaris HOM05D004394 ORTHO05D005208 2.3e-50 202.2 124 79.0
MSTRG.25920 Avicennia marina HOM05D004394 ORTHO05D005208 3.0e-50 201.8 124 77.4
TWI12G1259 Tripterygium wilfordii HOM05D004394 ORTHO05D005208 3.0e-50 201.8 124 78.2
unitig_899.g14554 Utricularia gibba HOM05D000298 ORTHO05D000553 3.0e-50 201.8 124 75.0
BolC5t30836H Brassica oleracea HOM05D004394 ORTHO05D005208 3.9e-50 201.4 127 74.8
Cfa013636 Carpinus fangiana HOM05D004394 ORTHO05D005208 3.9e-50 201.4 124 77.4
AUR62036356 Chenopodium quinoa HOM05D004394 ORTHO05D005208 6.7e-50 200.7 124 76.6
CAN.G101.27 Capsicum annuum HOM05D004394 ORTHO05D005208 1.1e-49 199.9 124 77.4
Thhalv10009116m.g Eutrema salsugineum HOM05D004394 ORTHO05D005208 1.5e-49 199.5 126 74.6
Sabra05G0124400 Salix brachista HOM05D004394 ORTHO05D005208 1.5e-49 199.5 122 77.0
TPR.G10620 Trifolium pratense HOM05D004394 ORTHO05D005208 1.5e-49 199.5 124 77.4
MD15G1369300 Malus domestica HOM05D004394 ORTHO05D005208 1.9e-49 199.1 117 80.3
Psat1g170200 Pisum sativum HOM05D004394 ORTHO05D005208 1.9e-49 199.1 124 76.6
Sc01g0000460 Simmondsia chinensis HOM05D004394 ORTHO05D005208 1.9e-49 199.1 124 75.8
TPR.G17517 Trifolium pratense HOM05D004394 ORTHO05D005208 1.9e-49 199.1 124 76.6
EL10Ac5g11858 Beta vulgaris HOM05D004394 ORTHO05D005208 2.5e-49 198.7 124 75.8
Medtr2g028730 Medicago truncatula HOM05D004394 ORTHO05D005208 2.5e-49 198.7 124 76.6
Ah.12g059310 Amaranthus hybridus HOM05D004394 ORTHO05D005208 3.3e-49 198.4 124 76.6
RcHm_v2.0_Chr7g0238971 Rosa chinensis HOM05D004394 ORTHO05D005208 3.3e-49 198.4 124 79.8
AUR62030717 Chenopodium quinoa HOM05D004394 ORTHO05D005208 4.3e-49 198.0 124 75.8
Thhalv10019322m.g Eutrema salsugineum HOM05D004394 ORTHO05D005208 4.3e-49 198.0 125 73.6
CiPaw.08G045200 Carya illinoinensis HOM05D004394 ORTHO05D005208 5.7e-49 197.6 122 76.2
Gohir.A05G267200 Gossypium hirsutum HOM05D004394 ORTHO05D005208 7.4e-49 197.2 125 76.8
Medtr1g050345 Medicago truncatula HOM05D004394 ORTHO05D005208 7.4e-49 197.2 124 76.6
Glyma.10G218300 Glycine max HOM05D004394 ORTHO05D005208 9.7e-49 196.8 124 76.6
Lalb_Chr11g0065431 Lupinus albus HOM05D004394 ORTHO05D005208 9.7e-49 196.8 124 75.8
Hma1.2p1_0575F.1_g181580 Hydrangea macrophylla HOM05D004394 ORTHO05D005208 1.6e-48 196.1 117 80.3
Lj2g0026973 Lotus japonicus HOM05D004394 ORTHO05D005208 1.6e-48 196.1 124 76.6
CDE02G1736 Ceratophyllum demersum HOM05D004394 ORTHO05D005208 2.2e-48 195.7 124 75.0
Gorai.009G281400 Gossypium raimondii HOM05D004394 ORTHO05D005208 3.7e-48 194.9 125 76.0
CDE06G0322 Ceratophyllum demersum HOM05D004394 ORTHO05D005208 6.3e-48 194.1 124 73.4
PSO781G0205 Papaver somniferum HOM05D004394 ORTHO05D005208 8.2e-48 193.7 124 74.2
Gohir.D05G268800 Gossypium hirsutum HOM05D004394 ORTHO05D005208 1.1e-47 193.4 125 75.2
AT1G78190 Arabidopsis thaliana HOM05D004394 ORTHO05D005208 1.8e-47 192.6 125 73.6
ATR0782G020 Amborella trichopoda HOM05D004394 ORTHO05D005208 2.4e-47 192.2 124 72.6
Solyc04g074150.3 Solanum lycopersicum HOM05D004394 ORTHO05D005208 2.4e-47 192.2 117 79.5
COL.COLO4_16398 Corchorus olitorius HOM05D004394 ORTHO05D005208 3.1e-47 191.8 118 77.1
PSO541G5821 Papaver somniferum HOM05D004394 ORTHO05D005208 3.1e-47 191.8 124 73.4
Sp5g33330 Schrenkiella parvula HOM05D004394 ORTHO05D005208 3.1e-47 191.8 125 71.2
AL2G38520 Arabidopsis lyrata HOM05D004394 ORTHO05D005208 6.9e-47 190.7 125 72.8
AUR62027759 Chenopodium quinoa HOM05D004394 ORTHO05D005208 9.0e-47 190.3 124 72.6
Phvul.002G138800 Phaseolus vulgaris HOM05D004394 ORTHO05D005208 1.5e-46 189.5 123 74.0
BcaB03g15991 Brassica carinata HOM05D004394 ORTHO05D005208 2.0e-46 189.1 125 69.6
BcaB03g14221 Brassica carinata HOM05D004394 ORTHO05D005208 2.2e-45 185.7 113 77.9
Carub.0002s2509 Capsella rubella HOM05D004394 ORTHO05D005208 8.5e-45 183.7 125 72.0
C06p52130 Brassica napus HOM05D003496 ORTHO05D003909 1.9e-44 182.6 123 70.7
BolC6t40236H Brassica oleracea HOM05D003496 ORTHO05D003909 1.9e-44 182.6 123 70.7
BcaC08g47394 Brassica carinata HOM05D004394 ORTHO05D005208 2.5e-44 182.2 125 69.6
Rhsim06G0082000 Rhododendron simsii HOM05D004394 ORTHO05D005208 4.2e-44 181.4 122 73.8
Cpa.g.sc247.5 Carica papaya HOM05D004394 ORTHO05D005208 2.1e-43 179.1 122 71.3
CANSAT35G1737 Cannabis sativa HOM05D004394 ORTHO05D005208 2.7e-43 178.7 116 71.6
BraA07t31861Z Brassica rapa HOM05D003496 ORTHO05D003909 4.6e-43 177.9 123 69.1
SMO356G0508 Selaginella moellendorffii HOM05D004394 ORTHO05D005208 6.1e-43 177.6 124 68.5
SEGI_05614 Sequoiadendron giganteum HOM05D004394 ORTHO05D005208 6.1e-43 177.6 124 66.9
Mapoly0008s0078 Marchantia polymorpha HOM05D004394 ORTHO05D005208 7.9e-43 177.2 124 65.3
A07p43490 Brassica napus HOM05D003496 ORTHO05D003909 3.0e-42 175.3 123 67.5
EL10Ac1g01214 Beta vulgaris HOM05D004394 ORTHO05D005208 3.9e-42 174.9 117 72.6
CANSAT80G2909 Cannabis sativa HOM05D004394 ORTHO05D005208 5.1e-42 174.5 119 68.9
SHI20485 Sapria himalayana HOM05D004394 ORTHO05D005208 6.7e-42 174.1 122 68.0
Nitab4.5_0005777g0070 Nicotiana tabacum HOM05D004394 ORTHO05D005208 9.7e-41 170.2 115 72.2
Haze_00323 Corylus avellana HOM05D004394 ORTHO05D005208 1.7e-40 169.5 124 69.4
CBR_g44926 Chara braunii HOM05D004394 ORTHO05D005208 6.9e-39 164.1 124 62.9
Pp3c10_8220 Physcomitrium patens HOM05D004394 ORTHO05D005208 6.9e-39 164.1 124 62.1
Nn6g33602 Nelumbo nucifera HOM05D004394 ORTHO05D005208 1.5e-38 162.9 117 65.0
Nn4g22250 Nelumbo nucifera HOM05D004394 ORTHO05D005208 4.5e-38 161.4 110 66.4
Cre12.g512550 Chlamydomonas reinhardtii HOM05D004394 ORTHO05D005208 2.2e-37 159.1 123 62.6
Zm00001eb109660 Zea mays HOM05D004394 ORTHO05D005208 3.9e-34 148.3 132 53.0
AagrBONN_evm.TU.Sc2ySwM_344.4664 Anthoceros agrestis HOM05D004394 ORTHO05D005208 8.8e-34 147.1 124 57.3
Os07g0623000 Oryza sativa ssp. japonica HOM05D004394 ORTHO05D005208 1.1e-33 146.7 131 53.4
Cpa.g.sc257.3 Carica papaya HOM05D004394 ORTHO05D005208 1.4e-31 139.8 123 59.3
AUR62038524 Chenopodium quinoa HOM05D004394 ORTHO05D005208 1.8e-31 139.4 88 71.6
CiPaw.07G180000 Carya illinoinensis HOM05D004394 ORTHO05D005208 7.0e-31 137.5 107 63.6
MCO01G362 Micromonas commoda HOM05D004394 ORTHO05D005208 2.6e-30 135.6 123 53.7
PRCOL_00005343 Prasinoderma coloniale HOM05D004394 ORTHO05D005208 5.5e-28 127.9 132 47.0
Nn8g39569 Nelumbo nucifera HOM05D004394 ORTHO05D005208 7.5e-25 117.5 107 55.1
Haze_27710 Corylus avellana HOM05D004394 ORTHO05D005208 2.4e-23 112.5 123 49.6
Lsat_1_v5_gn_4_16040 Lactuca sativa HOM05D004394 ORTHO05D005208 5.3e-23 111.3 123 46.3
Cfa016137 Carpinus fangiana HOM05D004394 ORTHO05D005208 4.5e-22 108.2 116 50.0
QL05p087667 Quercus lobata HOM05D004394 ORTHO05D000126 5.0e-21 104.8 68 66.2
SEGI_26774 Sequoiadendron giganteum HOM05D004394 ORTHO05D005208 4.0e-18 95.1 60 68.3
Nn1g03585 Nelumbo nucifera HOM05D004394 ORTHO05D005208 7.0e-15 84.3 58 62.1
HanXRQChr03g0069311 Helianthus annuus HOM05D004394 ORTHO05D005208 2.6e-09 65.9 39 69.2


User provided reference genes

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