Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr5.2645 Acer truncatum HOM05D005693 ORTHO05D006826 2.9e-111 405.2 202 100.0
Atru.chr9.1297 Acer truncatum HOM05D005693 ORTHO05D006826 2.9e-111 405.2 202 100.0
Atru.chr8.1120 Acer truncatum HOM05D005693 ORTHO05D006826 7.0e-65 251.1 142 93.0
Ciclev10011987m.g Citrus clementina HOM05D005693 ORTHO05D006826 6.6e-31 138.3 143 58.0
Cpa.g.sc85.51 Carica papaya HOM05D005693 ORTHO05D006826 1.8e-28 130.2 161 52.2
Prupe.7G077600 Prunus persica HOM05D005693 ORTHO05D006826 2.4e-28 129.8 160 52.5
Haze_20000 Corylus avellana HOM05D005693 ORTHO05D006826 5.3e-28 128.6 162 51.2
CiPaw.09G046600 Carya illinoinensis HOM05D005693 ORTHO05D006826 6.9e-28 128.3 162 51.9
Gohir.A01G191200 Gossypium hirsutum HOM05D005693 ORTHO05D006826 1.2e-27 127.5 161 50.9
Thecc.05G172100 Theobroma cacao HOM05D005693 ORTHO05D006826 2.0e-27 126.7 163 51.5
MELO3C009620.2 Cucumis melo HOM05D005693 ORTHO05D006826 3.4e-27 125.9 160 50.6
Haze_20002 Corylus avellana HOM05D005693 ORTHO05D006826 4.5e-27 125.6 162 50.6
Gohir.D01G178700 Gossypium hirsutum HOM05D005693 ORTHO05D006826 9.9e-27 124.4 161 50.3
CsaV3_3G038750 Cucumis sativus L. HOM05D005693 ORTHO05D006826 1.3e-26 124.0 160 50.6
TWI53G1089 Tripterygium wilfordii HOM05D005693 ORTHO05D006826 1.3e-26 124.0 156 49.4
RcHm_v2.0_Chr3g0479521 Rosa chinensis HOM05D005693 ORTHO05D006826 1.7e-26 123.6 158 53.2
CANSAT64G1199 Cannabis sativa HOM05D005693 ORTHO05D006826 2.2e-26 123.2 163 50.3
Duzib128G0858 Durio zibethinus HOM05D005693 ORTHO05D006826 2.2e-26 123.2 163 50.3
Gorai.002G224200 Gossypium raimondii HOM05D005693 ORTHO05D006826 3.8e-26 122.5 161 50.9
Manes.09G035800 Manihot esculenta HOM05D005693 ORTHO05D006826 4.9e-26 122.1 164 48.8
Dinv24066 Davidia involucrata HOM05D005693 ORTHO05D006826 6.4e-26 121.7 165 49.1
COL.COLO4_33976 Corchorus olitorius HOM05D005693 ORTHO05D006826 1.1e-25 120.9 163 52.1
MD12G1056600 Malus domestica HOM05D005693 ORTHO05D006826 1.1e-25 120.9 160 49.4
ClCG10G017580 Citrullus lanatus HOM05D005693 ORTHO05D006826 2.4e-25 119.8 160 50.6
MD14G1055100 Malus domestica HOM05D005693 ORTHO05D006826 3.2e-25 119.4 160 48.8
THA.LOC104799293 Tarenaya hassleriana HOM05D005693 ORTHO05D006826 3.2e-25 119.4 164 49.4
PGSC0003DMG400014975 Solanum tuberosum HOM05D005693 ORTHO05D006826 4.2e-25 119.0 147 49.0
Sopen03g015940 Solanum pennellii HOM05D005693 ORTHO05D006826 5.4e-25 118.6 147 49.7
Duzib093G0150 Durio zibethinus HOM05D005693 ORTHO05D006826 1.6e-24 117.1 151 51.0
Lju124A25T35 Lonicera japonica HOM05D005693 ORTHO05D006826 2.7e-24 116.3 164 43.9
PGR004G1521 Punica granatum HOM05D005693 ORTHO05D006826 2.7e-24 116.3 160 46.2
Medtr7g093290 Medicago truncatula HOM05D005693 ORTHO05D006826 1.0e-23 114.4 136 55.1
QL07p023907 Quercus lobata HOM05D005693 ORTHO05D006826 1.3e-23 114.0 149 52.3
Solyc03g063320.3 Solanum lycopersicum HOM05D005693 ORTHO05D006826 1.8e-23 113.6 147 48.3
Psat3g068360 Pisum sativum HOM05D005693 ORTHO05D006826 2.3e-23 113.2 142 52.1
QL93p0118_0004 Quercus lobata HOM05D005693 ORTHO05D006826 3.0e-23 112.8 145 52.4
CAN.G87.1 Capsicum annuum HOM05D005693 ORTHO05D006826 3.9e-23 112.5 149 48.3
GSVIVG01033491001 Vitis vinifera HOM05D005693 ORTHO05D006826 3.9e-23 112.5 141 51.1
Aqoxy1G00128 Aquilegia oxysepala HOM05D005693 ORTHO05D006826 5.1e-23 112.1 160 46.9
arahy.Tifrunner.gnm1.ann1.C1QR5S Arachis hypogaea HOM05D005693 ORTHO05D006826 1.1e-22 110.9 138 53.6
arahy.Tifrunner.gnm1.ann1.F8DN54 Arachis hypogaea HOM05D005693 ORTHO05D006826 1.1e-22 110.9 138 53.6
Lj1g0019099 Lotus japonicus HOM05D005693 ORTHO05D006826 1.5e-22 110.5 131 55.0
Potri.016G045200 Populus trichocarpa HOM05D005693 ORTHO05D006826 1.5e-22 110.5 139 51.8
TPR.G18210 Trifolium pratense HOM05D005693 ORTHO05D006826 2.5e-22 109.8 130 53.8
DCAR_013542 Daucus carota HOM05D005693 ORTHO05D006826 3.3e-22 109.4 165 44.8
Sabra16G0049200 Salix brachista HOM05D005693 ORTHO05D006826 7.4e-22 108.2 139 50.4
Sed0000696 Sechium edule HOM05D005693 ORTHO05D006826 7.4e-22 108.2 173 45.7
Nitab4.5_0004458g0020 Nicotiana tabacum HOM05D005693 ORTHO05D006826 1.3e-21 107.5 152 48.0
TAR623G1103 Trochodendron aralioides HOM05D005693 ORTHO05D006826 2.1e-21 106.7 163 45.4
FvH4_6g22170 Fragaria vesca HOM05D005693 ORTHO05D006826 3.7e-21 105.9 160 47.5
Nitab4.5_0001137g0070 Nicotiana tabacum HOM05D005693 ORTHO05D006826 6.2e-21 105.1 152 45.4
Aa31LG3G6280 Aethionema arabicum HOM05D005693 ORTHO05D006826 8.1e-21 104.8 157 46.5
Sp3g10330 Schrenkiella parvula HOM05D005693 ORTHO05D006826 8.1e-21 104.8 161 46.0
Carub.0003s1144 Capsella rubella HOM05D005693 ORTHO05D006826 2.4e-20 103.2 161 45.3
AL3G23730 Arabidopsis lyrata HOM05D005693 ORTHO05D006826 4.0e-20 102.4 161 45.3
Thhalv10020889m.g Eutrema salsugineum HOM05D005693 ORTHO05D006826 4.0e-20 102.4 161 46.0
AT3G12100 Arabidopsis thaliana HOM05D005693 ORTHO05D006826 6.9e-20 101.7 161 44.7
FAN27G0418 Fragaria x ananassa HOM05D005693 ORTHO05D006826 1.2e-19 100.9 160 46.2
CSS0003318 Camellia sinensis var. sinensis HOM05D005693 ORTHO05D006826 2.0e-19 100.1 160 45.0
CSS0050183 Camellia sinensis var. sinensis HOM05D005693 ORTHO05D006826 2.0e-19 100.1 160 45.0
CARHR086660 Cardamine hirsuta HOM05D005693 ORTHO05D006826 2.0e-19 100.1 161 45.3
Ah.13g075810 Amaranthus hybridus HOM05D005693 ORTHO05D006826 7.6e-19 98.2 160 43.1
Actinidia32396 Actinidia chinensis HOM05D005693 ORTHO05D006826 1.0e-18 97.8 153 44.4
Ca_08527_v3 Cicer arietinum L. HOM05D005693 ORTHO05D006826 1.3e-18 97.4 121 52.9
AUR62012025 Chenopodium quinoa HOM05D005693 ORTHO05D006826 1.7e-18 97.1 159 44.0
EL10Ac3g06910 Beta vulgaris HOM05D005693 ORTHO05D006826 2.2e-18 96.7 156 44.9
PSO339G5051 Papaver somniferum HOM05D005693 ORTHO05D006826 2.2e-18 96.7 164 45.1
BcaC05g29290 Brassica carinata HOM05D005693 ORTHO05D006826 2.9e-18 96.3 161 44.1
C05p55720 Brassica napus HOM05D005693 ORTHO05D006826 2.9e-18 96.3 161 44.1
BolC5t34239H Brassica oleracea HOM05D005693 ORTHO05D006826 2.9e-18 96.3 161 44.1
AUR62015362 Chenopodium quinoa HOM05D005693 ORTHO05D006826 6.5e-18 95.1 159 44.0
BraA05t22521Z Brassica rapa HOM05D005693 ORTHO05D006826 8.4e-18 94.7 162 43.2
A05p37250 Brassica napus HOM05D005693 ORTHO05D006826 1.1e-17 94.4 161 43.5
Cc06_g15820 Coffea canephora HOM05D005693 ORTHO05D006826 1.9e-17 93.6 154 44.2
Eucgr.A02454 Eucalyptus grandis HOM05D005693 ORTHO05D006826 2.5e-17 93.2 143 43.4
Lsat_1_v5_gn_8_75420 Lactuca sativa HOM05D005693 ORTHO05D006826 3.2e-17 92.8 164 42.1
BcaB06g25545 Brassica carinata HOM05D005693 ORTHO05D006826 7.1e-17 91.7 164 41.5
Migut.J01840 Erythranthe guttata HOM05D005693 ORTHO05D006826 3.5e-16 89.4 156 42.9
FAN25G3535 Fragaria x ananassa HOM05D011417 ORTHO05D006826 3.5e-16 89.4 151 43.7
Lalb_Chr18g0047901 Lupinus albus HOM05D005693 ORTHO05D006826 6.0e-16 88.6 148 44.6
Hund24794 Selenicereus undatus HOM05D005693 ORTHO05D006826 7.9e-16 88.2 160 45.6
Hma1.2p1_0648F.1_g195113 Hydrangea macrophylla HOM05D005693 ORTHO05D006826 3.0e-15 86.3 127 45.7
Glyma.03G145200 Glycine max HOM05D005693 ORTHO05D006826 3.9e-15 85.9 131 46.6
HanXRQChr05g0132951 Helianthus annuus HOM05D005693 ORTHO05D006826 6.7e-15 85.1 170 38.2
vmacro07901 Vaccinium macrocarpon HOM05D005693 ORTHO05D006826 8.7e-15 84.7 166 40.4
Oeu063873.1 Olea europaea HOM05D005693 ORTHO05D006826 1.5e-14 84.0 145 45.5
Glyma.19G148200 Glycine max HOM05D005693 ORTHO05D006826 2.5e-14 83.2 127 45.7
Phvul.001G142750 Phaseolus vulgaris HOM05D005693 ORTHO05D006826 5.7e-14 82.0 126 46.8
Sc19g0006040 Simmondsia chinensis HOM05D005693 ORTHO05D006826 3.7e-13 79.3 159 40.3
VMungo1383G3018 Vigna mungo HOM05D005693 ORTHO05D006826 4.8e-13 79.0 104 49.0
Nn7g36005 Nelumbo nucifera HOM05D005693 ORTHO05D006826 1.4e-12 77.4 146 37.7
SalBow6G0162 Salvia bowleyana HOM05D005693 ORTHO05D006826 3.1e-12 76.3 144 40.3
CDE05G1621 Ceratophyllum demersum HOM05D005693 ORTHO05D006826 1.2e-11 74.3 128 43.8
Peaxi162Scf00258g00724 Petunia axillaris HOM05D005693 ORTHO05D006826 2.6e-11 73.2 147 43.5
MSTRG.6485 Avicennia marina HOM05D005693 ORTHO05D006826 3.4e-11 72.8 161 41.0
CDE05G0078 Ceratophyllum demersum HOM05D005693 ORTHO05D006826 5.8e-11 72.0 118 44.1
Manes.11G017601 Manihot esculenta HOM05D005693 ORTHO05D006826 1.9e-09 67.0 53 69.8
Manes.17G026624 Manihot esculenta HOM05D005693 ORTHO05D006826 1.9e-09 67.0 53 69.8
SEGI_14579 Sequoiadendron giganteum HOM05D005693 ORTHO05D006826 4.2e-09 65.9 187 33.7
ATR0807G195 Amborella trichopoda HOM05D005693 ORTHO05D006826 2.7e-08 63.2 167 35.3
PSO384G0754 Papaver somniferum HOM05D005693 ORTHO05D006826 1.3e-07 60.8 43 62.8
Zm00001eb190540 Zea mays HOM05D005693 ORTHO05D006826 2.3e-07 60.1 131 36.6
RcHm_v2.0_Chr2g0145321 Rosa chinensis HOM05D005693 ORTHO05D006826 3.9e-07 59.3 48 66.7
unitig_744.g24644 Utricularia gibba HOM05D001741 ORTHO05D002196 2.5e-06 56.6 101 36.6
HPP92_009025 Vanilla planifolia HOM05D005693 ORTHO05D006826 7.4e-06 55.1 144 33.3
HPP92_009079 Vanilla planifolia HOM05D005693 ORTHO05D006826 7.4e-06 55.1 144 33.3


User provided reference genes

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