Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr5.2623 Acer truncatum HOM05D000003 ORTHO05D000006 5.7e-55 217.2 103 100.0
Atru.chr2.2117 Acer truncatum HOM05D000003 ORTHO05D000004 1.9e-10 69.3 51 62.7
Atru.chr3.1667 Acer truncatum HOM05D000003 ORTHO05D000004 7.3e-10 67.4 51 60.8
Cc00_g07050 Coffea canephora HOM05D000003 ORTHO05D000004 9.6e-10 67.0 101 36.6
Atru.chr1.2292 Acer truncatum HOM05D000003 ORTHO05D000004 1.3e-09 66.6 51 58.8
Atru.chr12.2056 Acer truncatum HOM05D000003 ORTHO05D000022 1.6e-09 66.2 51 60.8
RcHm_v2.0_Chr2g0140031 Rosa chinensis HOM05D000003 ORTHO05D000004 4.8e-09 64.7 50 60.0
Atru.chr1.2151 Acer truncatum HOM05D000003 ORTHO05D000004 6.2e-09 64.3 51 58.8
Atru.chr10.504 Acer truncatum HOM05D000003 ORTHO05D000022 6.2e-09 64.3 51 60.8
Atru.chr8.1018 Acer truncatum HOM05D000003 ORTHO05D000004 6.2e-09 64.3 51 58.8
TAR018G0001 Trochodendron aralioides HOM05D000003 ORTHO05D000004 8.1e-09 63.9 67 44.8
Aqoxy4G00661 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 4.0e-08 61.6 66 43.9
Rhsim08G0178900 Rhododendron simsii HOM05D000003 ORTHO05D000006 4.0e-08 61.6 90 33.3
Atru.chr11.689 Acer truncatum HOM05D000003 ORTHO05D000004 5.3e-08 61.2 51 56.9
RcHm_v2.0_Chr2g0160431 Rosa chinensis HOM05D000003 ORTHO05D000004 5.3e-08 61.2 49 53.1
RcHm_v2.0_Chr3g0453641 Rosa chinensis HOM05D000003 ORTHO05D000004 5.3e-08 61.2 49 53.1
RcHm_v2.0_Chr3g0455401 Rosa chinensis HOM05D000003 ORTHO05D000004 5.3e-08 61.2 49 53.1
Atru.chr9.554 Acer truncatum HOM05D000003 ORTHO05D000004 6.9e-08 60.8 49 61.2
Atru.chr3.1478 Acer truncatum HOM05D000003 ORTHO05D000004 1.2e-07 60.1 50 54.0
RcHm_v2.0_Chr5g0027881 Rosa chinensis HOM05D000003 ORTHO05D000004 2.0e-07 59.3 74 36.5
Sopen01g019410 Solanum pennellii HOM05D000003 ORTHO05D000006 2.0e-07 59.3 52 50.0
CANSAT11G0650 Cannabis sativa HOM05D000003 ORTHO05D000004 2.6e-07 58.9 78 41.0
Sopen04g007290 Solanum pennellii HOM05D000003 ORTHO05D000006 2.6e-07 58.9 50 46.0
PGSC0003DMG400013768 Solanum tuberosum HOM05D000003 ORTHO05D000004 2.6e-07 58.9 66 39.4
CANSAT54G2152 Cannabis sativa HOM05D000003 ORTHO05D000004 3.4e-07 58.5 64 40.6
Psat3g081000 Pisum sativum HOM05D000003 ORTHO05D000006 3.4e-07 58.5 97 32.0
QL12p022316 Quercus lobata HOM05D000003 ORTHO05D000006 3.4e-07 58.5 77 40.3
SEGI_28571 Sequoiadendron giganteum HOM05D000003 ORTHO05D000004 3.4e-07 58.5 70 44.3
Cc00_g08350 Coffea canephora HOM05D000003 ORTHO05D000004 4.5e-07 58.2 50 48.0
PSO478G0348 Papaver somniferum HOM05D000003 ORTHO05D000004 4.5e-07 58.2 47 51.1
PSO782G4793 Papaver somniferum HOM05D000003 ORTHO05D000004 4.5e-07 58.2 50 46.0
Aqoxy4G02901 Aquilegia oxysepala HOM05D000003 ORTHO05D000007 5.8e-07 57.8 50 44.0
PSO063G4574 Papaver somniferum HOM05D000003 ORTHO05D000004 5.8e-07 57.8 47 46.8
SEGI_27891 Sequoiadendron giganteum HOM05D008033 ORTHO05D000004 5.8e-07 57.8 97 36.1
Aqoxy2G01850 Aquilegia oxysepala HOM05D000003 ORTHO05D000006 7.6e-07 57.4 53 39.6
ECA232G1739 Erigeron canadensis HOM05D000003 ORTHO05D000004 7.6e-07 57.4 63 42.9
ECA234G2857 Erigeron canadensis HOM05D000003 ORTHO05D000004 7.6e-07 57.4 45 51.1
Rhsim04G0047200 Rhododendron simsii HOM05D000003 ORTHO05D000004 7.6e-07 57.4 64 39.1
CANSAT35G0246 Cannabis sativa HOM05D000003 ORTHO05D000004 9.9e-07 57.0 67 38.8
CANSAT35G1149 Cannabis sativa HOM05D000003 ORTHO05D000004 9.9e-07 57.0 66 36.4
PSO478G1592 Papaver somniferum HOM05D000003 ORTHO05D000006 9.9e-07 57.0 67 34.3
PSO674G0028 Papaver somniferum HOM05D000003 ORTHO05D000006 9.9e-07 57.0 54 48.1
RhsimUnG0247100 Rhododendron simsii HOM05D000003 ORTHO05D000004 9.9e-07 57.0 64 39.1
SEGI_12016 Sequoiadendron giganteum HOM05D000003 ORTHO05D000006 9.9e-07 57.0 43 48.8
Aqoxy3G02379 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 1.3e-06 56.6 66 37.9
Aqoxy1G00462 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 1.7e-06 56.2 53 43.4
Aqoxy1G01114 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 1.7e-06 56.2 53 43.4
Aqoxy1G02313 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 1.7e-06 56.2 50 46.0
Aqoxy4G00597 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 1.7e-06 56.2 50 44.0
Aqoxy7G02232 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 1.7e-06 56.2 49 46.9
CANSAT35G0171 Cannabis sativa HOM05D000003 ORTHO05D000004 1.7e-06 56.2 64 40.6
CANSAT56G1890 Cannabis sativa HOM05D000003 ORTHO05D000004 1.7e-06 56.2 67 37.3
ECA233G0357 Erigeron canadensis HOM05D000003 ORTHO05D000004 1.7e-06 56.2 63 39.7
ECA248G0346 Erigeron canadensis HOM05D000003 ORTHO05D000004 1.7e-06 56.2 63 42.9
PSO541G4086 Papaver somniferum HOM05D000003 ORTHO05D000006 1.7e-06 56.2 90 30.0
Rhsim06G0103400 Rhododendron simsii HOM05D000003 ORTHO05D000004 1.7e-06 56.2 46 52.2
Sopen11g018190 Solanum pennellii HOM05D000003 ORTHO05D000004 1.7e-06 56.2 48 50.0
TPR.G40209 Trifolium pratense HOM05D000003 ORTHO05D000004 1.7e-06 56.2 75 37.3
Atru.chr9.275 Acer truncatum HOM05D000003 ORTHO05D000004 2.2e-06 55.8 51 52.9
AL2G10360 Arabidopsis lyrata HOM05D000003 ORTHO05D000004 2.2e-06 55.8 53 47.2
AUR62033805 Chenopodium quinoa HOM05D000003 ORTHO05D000004 2.2e-06 55.8 65 40.0
PSO782G4927 Papaver somniferum HOM05D000003 ORTHO05D000006 2.2e-06 55.8 50 50.0
Rhsim05G0174100 Rhododendron simsii HOM05D000003 ORTHO05D000004 2.2e-06 55.8 64 37.5
Aqoxy7G02644 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 2.9e-06 55.5 49 51.0
CANSAT11G1393 Cannabis sativa HOM05D000003 ORTHO05D000004 2.9e-06 55.5 51 41.2
CANSAT78G2405 Cannabis sativa HOM05D000003 ORTHO05D000004 2.9e-06 55.5 65 38.5
ECA234G1006 Erigeron canadensis HOM05D000004 ORTHO05D000002 2.9e-06 55.5 63 42.9
ECA247G0237 Erigeron canadensis HOM05D000003 ORTHO05D000004 2.9e-06 55.5 77 35.1
Nn5g28447 Nelumbo nucifera HOM05D000003 ORTHO05D000004 2.9e-06 55.5 61 37.7
PSO063G2318 Papaver somniferum HOM05D000003 ORTHO05D000004 2.9e-06 55.5 40 57.5
PSO675G0684 Papaver somniferum HOM05D000003 ORTHO05D000004 2.9e-06 55.5 66 40.9
Sopen03g011820 Solanum pennellii HOM05D000003 ORTHO05D000004 2.9e-06 55.5 49 42.9
CANSAT78G1083 Cannabis sativa HOM05D000003 ORTHO05D000004 3.8e-06 55.1 67 37.3
CANSAT80G2177 Cannabis sativa HOM05D000003 ORTHO05D009135 3.8e-06 55.1 83 33.7
ECA238G1003 Erigeron canadensis HOM05D000582 ORTHO05D000456 3.8e-06 55.1 74 36.5
PSO478G1931 Papaver somniferum HOM05D000003 ORTHO05D000004 3.8e-06 55.1 54 46.3
Rhsim06G0055700 Rhododendron simsii HOM05D000003 ORTHO05D000004 3.8e-06 55.1 51 41.2
Atru.chr1.3506 Acer truncatum HOM05D000003 ORTHO05D000006 4.9e-06 54.7 57 45.6
Aqoxy2G02926 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 4.9e-06 54.7 50 46.0
Aqoxy3G01937 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 4.9e-06 54.7 50 48.0
Aqoxy5G02675 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 4.9e-06 54.7 51 45.1
CSS0044575 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 4.9e-06 54.7 73 37.0
CANSAT56G2496 Cannabis sativa HOM05D000003 ORTHO05D000004 4.9e-06 54.7 66 43.9
CANSAT80G0055 Cannabis sativa HOM05D000003 ORTHO05D000004 4.9e-06 54.7 65 36.9
PSO017G6681 Papaver somniferum HOM05D000003 ORTHO05D000004 4.9e-06 54.7 51 43.1
PSO063G2554 Papaver somniferum HOM05D000003 ORTHO05D000004 4.9e-06 54.7 51 39.2
PSO384G3075 Papaver somniferum HOM05D000003 ORTHO05D000004 4.9e-06 54.7 71 40.8
PSO675G4830 Papaver somniferum HOM05D000003 ORTHO05D000004 4.9e-06 54.7 50 42.0
Rhsim01G0109500 Rhododendron simsii HOM05D000003 ORTHO05D000004 4.9e-06 54.7 51 43.1
Rhsim08G0091800 Rhododendron simsii HOM05D000003 ORTHO05D000004 4.9e-06 54.7 51 43.1
SHI47979 Sapria himalayana HOM05D000024 ORTHO05D000006 4.9e-06 54.7 50 42.0
SHI48154 Sapria himalayana HOM05D000024 ORTHO05D000006 4.9e-06 54.7 50 42.0
Aqoxy1G02491 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 6.4e-06 54.3 50 46.0
Aqoxy5G02871 Aquilegia oxysepala HOM05D000003 ORTHO05D000651 6.4e-06 54.3 83 31.3
AUR62007792 Chenopodium quinoa HOM05D000003 ORTHO05D000004 6.4e-06 54.3 64 42.2
ECA238G1757 Erigeron canadensis HOM05D000003 ORTHO05D000004 6.4e-06 54.3 62 38.7
ECA240G4653 Erigeron canadensis HOM05D000006 ORTHO05D000004 6.4e-06 54.3 65 44.6
ECA248G2549 Erigeron canadensis HOM05D000003 ORTHO05D000004 6.4e-06 54.3 45 46.7
Lalb_Chr02g0151641 Lupinus albus HOM05D000003 ORTHO05D000004 6.4e-06 54.3 50 42.0
Rhsim04G0100600 Rhododendron simsii HOM05D000003 ORTHO05D000004 6.4e-06 54.3 46 50.0
TAR550G0001 Trochodendron aralioides HOM05D000003 ORTHO05D000004 6.4e-06 54.3 69 34.8
Aqoxy3G01935 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 8.4e-06 53.9 50 48.0
Aqoxy4G01322 Aquilegia oxysepala HOM05D000003 ORTHO05D000651 8.4e-06 53.9 49 44.9
Aqoxy5G03351 Aquilegia oxysepala HOM05D000003 ORTHO05D000651 8.4e-06 53.9 40 50.0
CANSAT56G2527 Cannabis sativa HOM05D000003 ORTHO05D000004 8.4e-06 53.9 64 40.6
ECA233G3265 Erigeron canadensis HOM05D000003 ORTHO05D000004 8.4e-06 53.9 63 38.1
PSO013G0215 Papaver somniferum HOM05D000003 ORTHO05D000004 8.4e-06 53.9 50 42.0
PSO017G3984 Papaver somniferum HOM05D000003 ORTHO05D000004 8.4e-06 53.9 46 45.7
PSO133G0079 Papaver somniferum HOM05D000003 ORTHO05D000004 8.4e-06 53.9 53 43.4
PSO170G6460 Papaver somniferum HOM05D000003 ORTHO05D000006 8.4e-06 53.9 47 42.6
PSO210G1229 Papaver somniferum HOM05D000003 ORTHO05D000004 8.4e-06 53.9 52 46.2
PSO782G4618 Papaver somniferum HOM05D000003 ORTHO05D000004 8.4e-06 53.9 49 51.0
Potri.014G189001 Populus trichocarpa HOM05D000003 ORTHO05D000004 8.4e-06 53.9 69 40.6
Prupe.7G008600 Prunus persica HOM05D000003 ORTHO05D000004 8.4e-06 53.9 56 37.5
TAR014G0001 Trochodendron aralioides HOM05D000003 ORTHO05D000004 8.4e-06 53.9 48 45.8


User provided reference genes

Program Settings