Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr5.2447 Acer truncatum HOM05D003477 ORTHO05D004043 4.9e-45 184.1 93 100.0
Ciclev10029666m.g Citrus clementina HOM05D003477 ORTHO05D004043 9.5e-25 116.7 97 70.1
Duzib052G0507 Durio zibethinus HOM05D003477 ORTHO05D004043 1.8e-23 112.5 102 63.7
Lsat_1_v5_gn_9_111940 Lactuca sativa HOM05D003477 ORTHO05D004043 6.8e-23 110.5 98 64.3
Prupe.8G137400 Prunus persica HOM05D003477 ORTHO05D004043 2.6e-22 108.6 99 64.6
Gorai.005G234400 Gossypium raimondii HOM05D003477 ORTHO05D004043 4.4e-22 107.8 101 62.4
Dinv15774 Davidia involucrata HOM05D003477 ORTHO05D004043 5.8e-22 107.5 101 63.4
CANSAT25G3186 Cannabis sativa HOM05D003477 ORTHO05D004043 9.9e-22 106.7 97 62.9
Gorai.008G021900 Gossypium raimondii HOM05D003477 ORTHO05D004043 2.2e-21 105.5 102 59.8
Actinidia00402 Actinidia chinensis HOM05D003477 ORTHO05D004043 2.9e-21 105.1 98 60.2
FAN27G0803 Fragaria x ananassa HOM05D003477 ORTHO05D004043 2.9e-21 105.1 96 63.5
SGA_v2.0_scaffold32G13034 Striga asiatica HOM05D003477 ORTHO05D004043 2.9e-21 105.1 102 59.8
ClCG05G010360 Citrullus lanatus HOM05D003477 ORTHO05D004043 3.7e-21 104.8 103 60.2
TAR625G0309 Trochodendron aralioides HOM05D003477 ORTHO05D004043 1.4e-20 102.8 102 60.8
Duzib248G0529 Durio zibethinus HOM05D003477 ORTHO05D004043 2.4e-20 102.1 100 62.0
DCAR_001659 Daucus carota HOM05D003477 ORTHO05D004043 5.4e-20 100.9 96 56.2
FAN15G1392 Fragaria x ananassa HOM05D003477 ORTHO05D004043 5.4e-20 100.9 94 61.7
FvH4_2g04800 Fragaria vesca HOM05D003477 ORTHO05D004043 9.2e-20 100.1 96 61.5
Sed0009886 Sechium edule HOM05D003477 ORTHO05D004043 9.2e-20 100.1 102 60.8
DCAR_029094 Daucus carota HOM05D003477 ORTHO05D004043 1.2e-19 99.8 96 55.2
FAN20G0459 Fragaria x ananassa HOM05D003477 ORTHO05D004043 1.6e-19 99.4 96 60.4
QL11p032673 Quercus lobata HOM05D003477 ORTHO05D004043 2.1e-19 99.0 98 58.2
CiPaw.05G013300 Carya illinoinensis HOM05D003477 ORTHO05D004043 2.7e-19 98.6 104 60.6
MELO3C018498.2 Cucumis melo HOM05D003477 ORTHO05D004043 2.7e-19 98.6 101 59.4
TWI31G0442 Tripterygium wilfordii HOM05D003477 ORTHO05D004043 6.0e-19 97.4 102 57.8
FAN24G0602 Fragaria x ananassa HOM05D003477 ORTHO05D004043 7.8e-19 97.1 96 60.4
vmacro01991 Vaccinium macrocarpon HOM05D003477 ORTHO05D004043 1.3e-18 96.3 99 54.5
TAR376G0403 Trochodendron aralioides HOM05D003477 ORTHO05D004043 3.0e-18 95.1 100 60.0
SGA_v2.0_scaffold225G42992 Striga asiatica HOM05D003477 ORTHO05D004043 8.6e-18 93.6 104 58.7
A03p45360 Brassica napus HOM05D003477 ORTHO05D004043 1.1e-17 93.2 102 57.8
BraA03t13668Z Brassica rapa HOM05D003477 ORTHO05D004043 1.1e-17 93.2 102 57.8
CARHR105430 Cardamine hirsuta HOM05D003477 ORTHO05D004043 1.1e-17 93.2 102 57.8
Sabra16G0187400 Salix brachista HOM05D003477 ORTHO05D004043 1.1e-17 93.2 99 58.6
ClCG02G006540 Citrullus lanatus HOM05D003477 ORTHO05D004043 1.5e-17 92.8 105 58.1
Oeu013760.1 Olea europaea HOM05D003477 ORTHO05D004043 2.5e-17 92.0 100 58.0
Aqoxy6G02834 Aquilegia oxysepala HOM05D003477 ORTHO05D004043 4.3e-17 91.3 109 57.8
Cfa004605 Carpinus fangiana HOM05D003477 ORTHO05D004043 4.3e-17 91.3 88 62.5
vmacro19455 Vaccinium macrocarpon HOM05D003477 ORTHO05D004043 4.3e-17 91.3 99 56.6
arahy.Tifrunner.gnm1.ann1.K085P0 Arachis hypogaea HOM05D003477 ORTHO05D004043 1.2e-16 89.7 99 59.6
Sed0015852 Sechium edule HOM05D003477 ORTHO05D004043 1.2e-16 89.7 89 59.6
PGSC0003DMG400025859 Solanum tuberosum HOM05D003477 ORTHO05D004043 1.2e-16 89.7 102 58.8
Duzib132G0501 Durio zibethinus HOM05D003477 ORTHO05D004043 1.6e-16 89.4 92 59.8
CsaV3_3G018130 Cucumis sativus L. HOM05D003477 ORTHO05D004043 2.1e-16 89.0 91 59.3
Aa31LG2G16840 Aethionema arabicum HOM05D003477 ORTHO05D004043 2.8e-16 88.6 103 57.3
SalBow3G1026 Salvia bowleyana HOM05D003477 ORTHO05D004043 3.6e-16 88.2 104 55.8
CSS0007946 Camellia sinensis var. sinensis HOM05D003477 ORTHO05D004043 6.2e-16 87.4 89 59.6
CSS0046932 Camellia sinensis var. sinensis HOM05D003477 ORTHO05D004043 6.2e-16 87.4 89 59.6
Haze_10200 Corylus avellana HOM05D003477 ORTHO05D004043 8.1e-16 87.0 91 60.4
TWI79G1417 Tripterygium wilfordii HOM05D003477 ORTHO05D004043 8.1e-16 87.0 92 57.6
CDE02G3617 Ceratophyllum demersum HOM05D003477 ORTHO05D004043 1.1e-15 86.7 100 54.0
Thecc.02G111100 Theobroma cacao HOM05D003477 ORTHO05D004043 1.1e-15 86.7 92 58.7
Carub.0003s2895 Capsella rubella HOM05D003477 ORTHO05D004043 1.4e-15 86.3 93 60.2
Gohir.D02G206836 Gossypium hirsutum HOM05D003477 ORTHO05D004043 1.4e-15 86.3 92 58.7
Sabra09G0072000 Salix brachista HOM05D003477 ORTHO05D004043 1.8e-15 85.9 99 50.5
Migut.B00399 Erythranthe guttata HOM05D003477 ORTHO05D004043 2.4e-15 85.5 101 54.5
MBI04_g11440_MAGBIO Magnolia biondii HOM05D003477 ORTHO05D004043 2.4e-15 85.5 103 55.3
TAR381G0852 Trochodendron aralioides HOM05D003477 ORTHO05D004043 2.4e-15 85.5 91 58.2
arahy.Tifrunner.gnm1.ann1.S3TCSS Arachis hypogaea HOM05D003477 ORTHO05D004043 3.1e-15 85.1 99 57.6
BolC1t00438H Brassica oleracea HOM05D003477 ORTHO05D004043 3.1e-15 85.1 104 51.0
Dinv42204 Davidia involucrata HOM05D003477 ORTHO05D004043 3.1e-15 85.1 86 57.0
Gohir.D12G021600 Gossypium hirsutum HOM05D003477 ORTHO05D004043 3.1e-15 85.1 92 56.5
Potri.001G298800 Populus trichocarpa HOM05D003477 ORTHO05D004043 3.1e-15 85.1 90 54.4
VMungo0720G2427 Vigna mungo HOM05D003477 ORTHO05D004043 3.1e-15 85.1 103 56.3
BcaC01g03075 Brassica carinata HOM05D003477 ORTHO05D004043 5.2e-15 84.3 102 54.9
C03p56260 Brassica napus HOM05D003477 ORTHO05D004043 5.2e-15 84.3 102 54.9
BolC3t17914H Brassica oleracea HOM05D003477 ORTHO05D004043 5.2e-15 84.3 102 54.9
SalBow6G1705 Salvia bowleyana HOM05D003477 ORTHO05D004043 5.2e-15 84.3 105 54.3
C01p04520 Brassica napus HOM05D003477 ORTHO05D004043 6.8e-15 84.0 104 50.0
Gohir.A03G185500 Gossypium hirsutum HOM05D003477 ORTHO05D004043 6.8e-15 84.0 92 57.6
PSO675G3465 Papaver somniferum HOM05D003477 ORTHO05D004043 6.8e-15 84.0 89 56.2
HanXRQChr03g0068771 Helianthus annuus HOM05D003477 ORTHO05D004043 8.9e-15 83.6 87 58.6
PSO210G4486 Papaver somniferum HOM05D003477 ORTHO05D004043 8.9e-15 83.6 96 51.0
A01p04150 Brassica napus HOM05D003477 ORTHO05D004043 1.2e-14 83.2 104 51.0
BraA01t00404Z Brassica rapa HOM05D003477 ORTHO05D004043 1.2e-14 83.2 104 51.0
CAN.G606.19 Capsicum annuum HOM05D003477 ORTHO05D004043 2.0e-14 82.4 96 57.3
CDE01G0745 Ceratophyllum demersum HOM05D003477 ORTHO05D004043 4.4e-14 81.3 104 51.9
Gohir.A12G021300 Gossypium hirsutum HOM05D003477 ORTHO05D004043 4.4e-14 81.3 92 54.3
Oeu029533.3 Olea europaea HOM05D003477 ORTHO05D004043 4.4e-14 81.3 94 52.1
Manes.10G075200 Manihot esculenta HOM05D003477 ORTHO05D004043 7.6e-14 80.5 93 52.7
Hma1.2p1_1023F.1_g249010 Hydrangea macrophylla HOM05D003477 ORTHO05D004043 9.9e-14 80.1 88 56.8
Duzib248G0862 Durio zibethinus HOM05D003477 ORTHO05D004043 1.3e-13 79.7 91 54.9
PSO675G6764 Papaver somniferum HOM05D003477 ORTHO05D004043 1.7e-13 79.3 89 52.8
MD10G1099700 Malus domestica HOM05D003477 ORTHO05D004043 2.2e-13 79.0 90 55.6
Manes.07G066700 Manihot esculenta HOM05D003477 ORTHO05D004043 2.2e-13 79.0 93 50.5
BcaC01g03076 Brassica carinata HOM05D003477 ORTHO05D004043 2.9e-13 78.6 80 58.8
ECA240G1244 Erigeron canadensis HOM05D003477 ORTHO05D004043 2.9e-13 78.6 87 56.3
Medtr1g107085 Medicago truncatula HOM05D003477 ORTHO05D004043 2.9e-13 78.6 105 55.2
Nitab4.5_0003699g0030 Nicotiana tabacum HOM05D003477 ORTHO05D004043 2.9e-13 78.6 86 54.7
Rhsim11G0157900 Rhododendron simsii HOM05D003477 ORTHO05D004043 2.9e-13 78.6 89 50.6
Actinidia34393 Actinidia chinensis HOM05D003477 ORTHO05D004043 3.8e-13 78.2 89 52.8
RcHm_v2.0_Chr6g0254531 Rosa chinensis HOM05D003477 ORTHO05D004043 3.8e-13 78.2 87 57.5
Thhalv10022939m.g Eutrema salsugineum HOM05D003477 ORTHO05D004043 4.9e-13 77.8 94 56.4
Potri.009G093400 Populus trichocarpa HOM05D003477 ORTHO05D004043 6.4e-13 77.4 90 52.2
Aa31LG8G13000 Aethionema arabicum HOM05D003477 ORTHO05D004043 1.4e-12 76.3 107 49.5
Rhsim11G0156400 Rhododendron simsii HOM05D003477 ORTHO05D004043 1.4e-12 76.3 89 49.4
AT2G15000 Arabidopsis thaliana HOM05D003477 ORTHO05D004043 1.9e-12 75.9 102 51.0
Carub.0007s0610 Capsella rubella HOM05D003477 ORTHO05D004043 1.9e-12 75.9 88 55.7
Sp3g28420 Schrenkiella parvula HOM05D003477 ORTHO05D004043 1.9e-12 75.9 102 51.0
CsaV3_7G008070 Cucumis sativus L. HOM05D010572 ORTHO05D012753 3.2e-12 75.1 95 54.7
Lj5g0009419 Lotus japonicus HOM05D003477 ORTHO05D004043 3.2e-12 75.1 100 49.0
AUR62003947 Chenopodium quinoa HOM05D003477 ORTHO05D004043 4.2e-12 74.7 102 46.1
Psat6g216680 Pisum sativum HOM05D003477 ORTHO05D004043 4.2e-12 74.7 105 51.4
AUR62038261 Chenopodium quinoa HOM05D003477 ORTHO05D004043 5.4e-12 74.3 104 48.1
Hund06306 Selenicereus undatus HOM05D003477 ORTHO05D004043 7.1e-12 73.9 96 50.0
Sopen01g049690 Solanum pennellii HOM05D003477 ORTHO05D004043 7.1e-12 73.9 92 56.5
AL3G46800 Arabidopsis lyrata HOM05D003477 ORTHO05D004043 9.3e-12 73.6 102 50.0
Solyc01g107450.4 Solanum lycopersicum HOM05D003477 ORTHO05D004043 1.2e-11 73.2 92 55.4
Rhsim05G0089200 Rhododendron simsii HOM05D003477 ORTHO05D004043 1.6e-11 72.8 87 56.3
Hund16371 Selenicereus undatus HOM05D003477 ORTHO05D004043 1.6e-11 72.8 109 49.5
Nn1g04659 Nelumbo nucifera HOM05D003477 ORTHO05D004043 2.1e-11 72.4 92 52.2
Sed0021400 Sechium edule HOM05D003477 ORTHO05D004043 4.6e-11 71.2 91 52.7
Cc02_g19410 Coffea canephora HOM05D003477 ORTHO05D004043 6.0e-11 70.9 92 50.0
Nn5g30458 Nelumbo nucifera HOM05D003477 ORTHO05D004043 1.0e-10 70.1 93 53.8
BcaNung04163 Brassica carinata HOM05D003477 ORTHO05D004043 1.3e-10 69.7 102 45.1
GSVIVG01037899001 Vitis vinifera HOM05D003477 ORTHO05D004043 3.0e-10 68.6 78 52.6
MELO3C031999.2 Cucumis melo HOM05D003477 ORTHO05D013069 5.1e-10 67.8 50 64.0
Phvul.007G041500 Phaseolus vulgaris HOM05D003477 ORTHO05D004043 5.1e-10 67.8 93 54.8
Cpa.g.sc106.115 Carica papaya HOM05D003477 ORTHO05D004043 1.1e-09 66.6 97 49.5
arahy.Tifrunner.gnm1.ann1.VE84TY Arachis hypogaea HOM05D003477 ORTHO05D004043 1.5e-09 66.2 90 51.1
Eucgr.I01090 Eucalyptus grandis HOM05D003477 ORTHO05D004043 1.5e-09 66.2 95 52.6
HanXRQChr09g0251061 Helianthus annuus HOM05D003477 ORTHO05D004043 1.5e-09 66.2 87 52.9
BcaC06g36034 Brassica carinata HOM05D003477 ORTHO05D004043 1.9e-09 65.9 102 44.1
Dinv26882 Davidia involucrata HOM05D003477 ORTHO05D004043 1.9e-09 65.9 91 49.5
PSO675G8803 Papaver somniferum HOM05D003477 ORTHO05D004043 1.9e-09 65.9 93 51.6
AT4G34265 Arabidopsis thaliana HOM05D003477 ORTHO05D004043 2.5e-09 65.5 90 50.0
Eucgr.H02262 Eucalyptus grandis HOM05D003477 ORTHO05D004043 2.5e-09 65.5 88 48.9
Glyma.20G130500 Glycine max HOM05D003477 ORTHO05D004043 7.3e-09 63.9 91 52.7
PSO541G5514 Papaver somniferum HOM05D003477 ORTHO05D004043 7.3e-09 63.9 93 50.5
Sc08g0001310 Simmondsia chinensis HOM05D003477 ORTHO05D004043 1.6e-08 62.8 95 47.4
CSS0020585 Camellia sinensis var. sinensis HOM05D003477 ORTHO05D004043 2.8e-08 62.0 93 49.5
arahy.Tifrunner.gnm1.ann1.T63M72 Arachis hypogaea HOM05D003477 ORTHO05D004043 6.2e-08 60.8 86 51.2
Ca_11060_v3 Cicer arietinum L. HOM05D003477 ORTHO05D004043 6.2e-08 60.8 95 51.6
Thhalv10026653m.g Eutrema salsugineum HOM05D003477 ORTHO05D004043 6.2e-08 60.8 93 44.1
Sed0004332 Sechium edule HOM05D003477 ORTHO05D004043 6.2e-08 60.8 85 47.1
AL7G17010 Arabidopsis lyrata HOM05D003477 ORTHO05D004043 8.1e-08 60.5 89 47.2
CARHR242520 Cardamine hirsuta HOM05D003477 ORTHO05D004043 1.1e-07 60.1 89 47.2
QL06p040030 Quercus lobata HOM05D003477 ORTHO05D004043 3.1e-07 58.5 89 47.2
RcHm_v2.0_Chr2g0107061 Rosa chinensis HOM05D003477 ORTHO05D004043 3.1e-07 58.5 94 44.7
DCAR_021977 Daucus carota HOM05D003477 ORTHO05D004043 6.9e-07 57.4 90 48.9
BcaB08g34577 Brassica carinata HOM05D003477 ORTHO05D004043 1.5e-06 56.2 93 45.2
unitig_0.g877 Utricularia gibba HOM05D003477 ORTHO05D004043 1.5e-06 56.2 91 44.0
CiPaw.06G168600 Carya illinoinensis HOM05D003477 ORTHO05D004043 2.0e-06 55.8 96 46.9
Phvul.002G014500 Phaseolus vulgaris HOM05D003477 ORTHO05D004043 2.0e-06 55.8 94 46.8
Lsat_1_v5_gn_2_85381 Lactuca sativa HOM05D003477 ORTHO05D004043 3.4e-06 55.1 99 46.5
EL10Ac6g15680 Beta vulgaris HOM05D003477 ORTHO05D004043 4.4e-06 54.7 95 42.1
unitig_22.g5195 Utricularia gibba HOM05D003477 ORTHO05D004043 4.4e-06 54.7 87 47.1
Actinidia03815 Actinidia chinensis HOM05D003477 ORTHO05D004043 5.8e-06 54.3 83 51.8
unitig_61.g26022 Utricularia gibba HOM05D003477 ORTHO05D004043 5.8e-06 54.3 90 42.2
Sc16g0001450 Simmondsia chinensis HOM05D003477 ORTHO05D004043 7.6e-06 53.9 94 43.6
Actinidia08244 Actinidia chinensis HOM05D003477 ORTHO05D004043 9.9e-06 53.5 85 50.6
ATR0315G039 Amborella trichopoda HOM05D003477 ORTHO05D004043 9.9e-06 53.5 103 45.6
Lj2g0006602 Lotus japonicus HOM05D003477 ORTHO05D004043 9.9e-06 53.5 92 46.7
Sp7g32050 Schrenkiella parvula HOM05D003477 ORTHO05D004043 9.9e-06 53.5 92 41.3


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