Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr5.2327 Acer truncatum HOM05D000018 ORTHO05D011404 1.4e-44 182.6 89 100.0
Ciclev10028646m.g Citrus clementina HOM05D000018 ORTHO05D011404 2.6e-27 125.2 82 73.2
TAR376G0339 Trochodendron aralioides HOM05D000018 ORTHO05D011404 9.1e-25 116.7 80 73.8
Dinv15817 Davidia involucrata HOM05D000018 ORTHO05D011404 3.8e-23 111.3 80 67.5
CiPaw.05G019100 Carya illinoinensis HOM05D000018 ORTHO05D011404 5.0e-23 110.9 80 68.8
QL11p030091 Quercus lobata HOM05D000018 ORTHO05D011404 2.7e-21 105.1 79 65.8
Nn5g30623 Nelumbo nucifera HOM05D000018 ORTHO05D011404 3.6e-21 104.8 83 61.4
RcHm_v2.0_Chr6g0252601 Rosa chinensis HOM05D000018 ORTHO05D011404 4.7e-21 104.4 85 63.5
PGR142G4149 Punica granatum HOM05D000018 ORTHO05D011404 2.3e-20 102.1 79 62.0
Oeu021358.1 Olea europaea HOM05D000018 ORTHO05D011404 2.0e-19 99.0 79 59.5
RhsimUnG0041500 Rhododendron simsii HOM05D000018 ORTHO05D011404 2.6e-19 98.6 80 60.0
RhsimUnG0123500 Rhododendron simsii HOM05D000018 ORTHO05D011404 2.6e-19 98.6 80 60.0
Cc02_g19970 Coffea canephora HOM05D000018 ORTHO05D011404 4.8e-18 94.4 79 59.5
vmacro01954 Vaccinium macrocarpon HOM05D000018 ORTHO05D011404 4.8e-18 94.4 80 58.8
EL10Ac9g22189 Beta vulgaris HOM05D000018 ORTHO05D011404 6.3e-18 94.0 80 56.2
Rhsim11G0151700 Rhododendron simsii HOM05D000018 ORTHO05D011404 3.1e-17 91.7 76 60.5
RhsimUnG0123600 Rhododendron simsii HOM05D000018 ORTHO05D011404 3.1e-17 91.7 76 60.5
AUR62030857 Chenopodium quinoa HOM05D000018 ORTHO05D011404 4.1e-17 91.3 80 57.5
HanXRQChr04g0128671 Helianthus annuus HOM05D000018 ORTHO05D011404 2.0e-16 89.0 79 58.2
SalBow6G2983 Salvia bowleyana HOM05D000018 ORTHO05D011404 7.7e-16 87.0 79 57.0
AUR62027018 Chenopodium quinoa HOM05D000018 ORTHO05D011404 1.3e-15 86.3 80 52.5
AUR62030858 Chenopodium quinoa HOM05D000018 ORTHO05D011404 2.3e-15 85.5 80 52.5
Ah.01g007060 Amaranthus hybridus HOM05D000018 ORTHO05D011404 3.3e-14 81.6 80 48.8
AUR62027017 Chenopodium quinoa HOM05D000018 ORTHO05D011404 9.5e-14 80.1 80 51.2
MSTRG.5314 Avicennia marina HOM05D000018 ORTHO05D011404 1.2e-13 79.7 83 49.4
Lj2A571G25 Lonicera japonica HOM05D000018 ORTHO05D011404 1.0e-12 76.6 81 55.6
Hund06512 Selenicereus undatus HOM05D000018 ORTHO05D011404 1.4e-12 76.3 74 51.4
EL10Ac9g22187 Beta vulgaris HOM05D000018 ORTHO05D011404 1.8e-09 65.9 57 56.1
CARHR012350 Cardamine hirsuta HOM05D000787 ORTHO05D001019 1.5e-06 56.2 61 47.5
Cfa018125 Carpinus fangiana HOM05D000787 ORTHO05D003730 1.5e-06 56.2 63 47.6
SEGI_14570 Sequoiadendron giganteum HOM05D000018 ORTHO05D000187 1.9e-06 55.8 81 38.3
SEGI_31628 Sequoiadendron giganteum HOM05D000018 ORTHO05D000187 1.9e-06 55.8 82 36.6
MBI15_g31440_MAGBIO Magnolia biondii HOM05D000018 ORTHO05D001040 2.5e-06 55.5 84 42.9
THA.LOC104818598 Tarenaya hassleriana HOM05D000787 ORTHO05D001019 2.5e-06 55.5 61 45.9
Aa31LG1G2730 Aethionema arabicum HOM05D000787 ORTHO05D001019 3.3e-06 55.1 61 49.2
BcaB05g25040 Brassica carinata HOM05D000787 ORTHO05D003730 3.3e-06 55.1 63 42.9
PGR102G0598 Punica granatum HOM05D000787 ORTHO05D001019 4.3e-06 54.7 73 46.6
CiPaw.16G023100 Carya illinoinensis HOM05D000787 ORTHO05D003730 5.6e-06 54.3 63 46.0
vmacro00859 Vaccinium macrocarpon HOM05D000787 ORTHO05D003730 5.6e-06 54.3 63 46.0
arahy.Tifrunner.gnm1.ann1.YQLB0K Arachis hypogaea HOM05D000787 ORTHO05D001019 7.3e-06 53.9 90 41.1
CiPaw.15G031600 Carya illinoinensis HOM05D000787 ORTHO05D003730 7.3e-06 53.9 63 46.0
Medtr3g088565 Medicago truncatula HOM05D000787 ORTHO05D003730 7.3e-06 53.9 63 46.0
THA.LOC104809474 Tarenaya hassleriana HOM05D000787 ORTHO05D001019 7.3e-06 53.9 61 44.3
TAR376G0918 Trochodendron aralioides HOM05D000787 ORTHO05D003730 7.3e-06 53.9 63 46.0
AT1G62380 Arabidopsis thaliana HOM05D000787 ORTHO05D001019 9.5e-06 53.5 61 47.5
Eucgr.F03839 Eucalyptus grandis HOM05D000787 ORTHO05D003730 9.5e-06 53.5 60 45.0


User provided reference genes

Program Settings