Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr5.2258 Acer truncatum HOM05D002370 ORTHO05D003878 4.0e-57 224.6 115 100.0
Atru.chr4.144 Acer truncatum HOM05D002370 ORTHO05D003878 1.9e-46 189.1 104 93.3
Atru.chr4.155 Acer truncatum HOM05D002370 ORTHO05D003878 1.9e-46 189.1 104 93.3
Manes.07G052660 Manihot esculenta HOM05D002370 ORTHO05D003878 5.4e-46 187.6 104 92.3
Nitab4.5_0000772g0070 Nicotiana tabacum HOM05D002370 ORTHO05D003878 5.4e-46 187.6 104 92.3
Nitab4.5_0010974g0020 Nicotiana tabacum HOM05D002370 ORTHO05D003878 5.4e-46 187.6 104 92.3
Peaxi162Scf00016g03243 Petunia axillaris HOM05D002370 ORTHO05D003878 5.4e-46 187.6 104 92.3
PGSC0003DMG401025733 Solanum tuberosum HOM05D002370 ORTHO05D003878 5.4e-46 187.6 104 92.3
Solyc01g106770.4 Solanum lycopersicum HOM05D002370 ORTHO05D003878 1.2e-45 186.4 104 91.3
Sopen01g049080 Solanum pennellii HOM05D002370 ORTHO05D003878 1.2e-45 186.4 104 91.3
Ciclev10027661m.g Citrus clementina HOM05D002370 ORTHO05D003878 2.1e-45 185.7 104 91.3
Dinv09531 Davidia involucrata HOM05D002370 ORTHO05D003878 2.7e-45 185.3 104 90.4
CAN.G606.78 Capsicum annuum HOM05D002370 ORTHO05D003878 3.5e-45 184.9 104 90.4
Glyma.01G241300 Glycine max HOM05D002370 ORTHO05D003878 3.5e-45 184.9 104 90.4
Glyma.11G002600 Glycine max HOM05D002370 ORTHO05D003878 3.5e-45 184.9 104 90.4
HanXRQChr04g0107251 Helianthus annuus HOM05D002370 ORTHO05D003878 3.5e-45 184.9 104 90.4
Cpa.g.sc520.2 Carica papaya HOM05D002370 ORTHO05D003878 4.6e-45 184.5 104 90.4
Gohir.A12G018200 Gossypium hirsutum HOM05D002370 ORTHO05D003878 4.6e-45 184.5 104 90.4
Gohir.D12G018800 Gossypium hirsutum HOM05D002370 ORTHO05D003878 4.6e-45 184.5 104 90.4
Gohir.A01G009500 Gossypium hirsutum HOM05D002370 ORTHO05D003878 6.0e-45 184.1 104 89.4
Gohir.D01G009100 Gossypium hirsutum HOM05D002370 ORTHO05D003878 6.0e-45 184.1 104 89.4
Gorai.002G011200 Gossypium raimondii HOM05D002370 ORTHO05D003878 6.0e-45 184.1 104 89.4
Prupe.8G151300 Prunus persica HOM05D002370 ORTHO05D003878 6.0e-45 184.1 104 90.4
ECA232G2594 Erigeron canadensis HOM05D002370 ORTHO05D003878 7.9e-45 183.7 104 89.4
Gorai.008G019100 Gossypium raimondii HOM05D002370 ORTHO05D003878 7.9e-45 183.7 101 93.1
Lsat_1_v5_gn_4_143680 Lactuca sativa HOM05D002370 ORTHO05D003878 7.9e-45 183.7 104 89.4
Phvul.002G049900 Phaseolus vulgaris HOM05D002370 ORTHO05D003878 7.9e-45 183.7 104 89.4
VMungo1215G1081 Vigna mungo HOM05D002370 ORTHO05D003878 7.9e-45 183.7 104 89.4
Ca_24363_v3 Cicer arietinum L. HOM05D002370 ORTHO05D003878 1.0e-44 183.3 104 88.5
Thecc.02G120900 Theobroma cacao HOM05D002370 ORTHO05D003878 1.0e-44 183.3 104 89.4
MSTRG.16667 Avicennia marina HOM05D002370 ORTHO05D003878 1.3e-44 183.0 104 90.4
ClCG02G007160 Citrullus lanatus HOM05D002370 ORTHO05D003878 1.7e-44 182.6 104 89.4
MELO3C018533.2 Cucumis melo HOM05D002370 ORTHO05D003878 1.7e-44 182.6 104 89.4
CsaV3_7G007670 Cucumis sativus L. HOM05D002370 ORTHO05D003878 1.7e-44 182.6 104 89.4
THA.LOC104826500 Tarenaya hassleriana HOM05D002370 ORTHO05D003878 1.7e-44 182.6 104 89.4
RcHm_v2.0_Chr6g0247951 Rosa chinensis HOM05D002370 ORTHO05D003878 2.3e-44 182.2 104 88.5
arahy.Tifrunner.gnm1.ann1.UC42H8 Arachis hypogaea HOM05D002370 ORTHO05D003878 3.0e-44 181.8 104 88.5
Haze_10317 Corylus avellana HOM05D002370 ORTHO05D003878 3.0e-44 181.8 104 88.5
TPR.G8287 Trifolium pratense HOM05D002370 ORTHO05D003878 3.0e-44 181.8 104 87.5
Cc02_g20160 Coffea canephora HOM05D002370 ORTHO05D003878 3.9e-44 181.4 104 89.4
CSS0028039 Camellia sinensis var. sinensis HOM05D002370 ORTHO05D003878 5.1e-44 181.0 104 88.5
COL.COLO4_32473 Corchorus olitorius HOM05D002370 ORTHO05D003878 5.1e-44 181.0 104 86.5
Psat4g228960 Pisum sativum HOM05D002370 ORTHO05D003878 5.1e-44 181.0 102 88.2
arahy.Tifrunner.gnm1.ann1.3J1H0B Arachis hypogaea HOM05D002370 ORTHO05D003878 6.6e-44 180.6 104 87.5
Lalb_Chr16g0376321 Lupinus albus HOM05D002370 ORTHO05D003878 6.6e-44 180.6 104 89.4
Medtr5g005380 Medicago truncatula HOM05D002370 ORTHO05D003878 6.6e-44 180.6 104 87.5
CSS0026275 Camellia sinensis var. sinensis HOM05D002370 ORTHO05D003878 1.1e-43 179.9 104 87.5
Actinidia00351 Actinidia chinensis HOM05D002370 ORTHO05D003878 1.5e-43 179.5 104 87.5
Thhalv10011174m.g Eutrema salsugineum HOM05D002370 ORTHO05D003878 1.9e-43 179.1 104 87.5
Migut.B00477 Erythranthe guttata HOM05D002370 ORTHO05D003878 2.5e-43 178.7 104 87.5
Lj1g0008728 Lotus japonicus HOM05D002370 ORTHO05D003878 2.5e-43 178.7 104 86.5
SGA_v2.0_scaffold519G52682 Striga asiatica HOM05D002370 ORTHO05D003878 2.5e-43 178.7 104 86.5
Actinidia02446 Actinidia chinensis HOM05D002370 ORTHO05D003878 3.3e-43 178.3 104 87.5
Lalb_Chr05g0210831 Lupinus albus HOM05D002370 ORTHO05D003878 3.3e-43 178.3 104 87.5
Duzib132G1084 Durio zibethinus HOM05D002370 ORTHO05D003878 4.3e-43 177.9 104 86.5
MD00G1031100 Malus domestica HOM05D002370 ORTHO05D003878 4.3e-43 177.9 104 87.5
CARHR040140 Cardamine hirsuta HOM05D002370 ORTHO05D003878 5.6e-43 177.6 104 86.5
Hma1.2p1_0661F.1_g197990 Hydrangea macrophylla HOM05D002370 ORTHO05D003878 7.3e-43 177.2 104 86.5
Lj5C222G6 Lonicera japonica HOM05D002370 ORTHO05D003878 7.3e-43 177.2 104 87.5
MD05G1107800 Malus domestica HOM05D002370 ORTHO05D003878 7.3e-43 177.2 104 87.5
Sp1g36890 Schrenkiella parvula HOM05D002370 ORTHO05D003878 7.3e-43 177.2 104 86.5
HanXRQChr04g0107281 Helianthus annuus HOM05D002370 ORTHO05D003878 9.6e-43 176.8 104 85.6
FAN15G3522 Fragaria x ananassa HOM05D002370 ORTHO05D003878 1.3e-42 176.4 104 86.5
GSVIVG01037040001 Vitis vinifera HOM05D002370 ORTHO05D003878 1.3e-42 176.4 104 86.5
AUR62027030 Chenopodium quinoa HOM05D002370 ORTHO05D003878 1.6e-42 176.0 104 86.5
SalBow6G7047 Salvia bowleyana HOM05D002370 ORTHO05D003878 1.6e-42 176.0 104 85.6
BcaB02g11126 Brassica carinata HOM05D002370 ORTHO05D003878 2.1e-42 175.6 104 85.6
BcaC05g27452 Brassica carinata HOM05D002370 ORTHO05D003878 2.1e-42 175.6 104 85.6
CiPaw.05G021600 Carya illinoinensis HOM05D002370 ORTHO05D003878 2.1e-42 175.6 104 83.7
vmacro01938 Vaccinium macrocarpon HOM05D002370 ORTHO05D003878 2.8e-42 175.3 104 86.5
Hund06505 Selenicereus undatus HOM05D002370 ORTHO05D003878 4.8e-42 174.5 104 85.6
TAR625G0640 Trochodendron aralioides HOM05D002370 ORTHO05D003878 4.8e-42 174.5 104 85.6
AL1G57600 Arabidopsis lyrata HOM05D002370 ORTHO05D003878 6.2e-42 174.1 104 84.6
FvH4_2g03080 Fragaria vesca HOM05D002370 ORTHO05D003878 6.2e-42 174.1 104 86.5
Sed0018886 Sechium edule HOM05D002370 ORTHO05D003878 6.2e-42 174.1 104 86.5
A06p03390 Brassica napus HOM05D002370 ORTHO05D003878 8.1e-42 173.7 104 84.6
C06p04900 Brassica napus HOM05D002370 ORTHO05D003878 8.1e-42 173.7 104 84.6
AT1G50030 Arabidopsis thaliana HOM05D002370 ORTHO05D003878 1.1e-41 173.3 104 83.7
AUR62030874 Chenopodium quinoa HOM05D002370 ORTHO05D003878 1.1e-41 173.3 104 85.6
EL10Ac9g22169 Beta vulgaris HOM05D002370 ORTHO05D003878 1.4e-41 172.9 104 84.6
BcaB07g33455 Brassica carinata HOM05D002370 ORTHO05D003878 1.4e-41 172.9 104 83.7
Potri.001G289200 Populus trichocarpa HOM05D002370 ORTHO05D003878 1.4e-41 172.9 104 83.7
Sabra16G0181000 Salix brachista HOM05D002370 ORTHO05D003878 1.4e-41 172.9 104 83.7
Carub.0001s3921 Capsella rubella HOM05D002370 ORTHO05D003878 1.8e-41 172.6 104 83.7
Eucgr.I02503 Eucalyptus grandis HOM05D002370 ORTHO05D003878 1.8e-41 172.6 104 84.6
FAN20G2522 Fragaria x ananassa HOM05D002370 ORTHO05D003878 1.8e-41 172.6 104 84.6
Ah.01g024560 Amaranthus hybridus HOM05D002370 ORTHO05D003878 2.4e-41 172.2 104 83.7
BcaC08g43183 Brassica carinata HOM05D002370 ORTHO05D003878 2.4e-41 172.2 104 83.7
FAN27G1380 Fragaria x ananassa HOM05D002370 ORTHO05D003878 2.4e-41 172.2 104 84.6
Potri.009G084500 Populus trichocarpa HOM05D002370 ORTHO05D003878 2.4e-41 172.2 104 82.7
CiPaw.06G163300 Carya illinoinensis HOM05D002370 ORTHO05D003878 3.1e-41 171.8 104 81.7
TWI59G1328 Tripterygium wilfordii HOM05D002370 ORTHO05D003878 3.1e-41 171.8 104 83.7
Aqoxy6G01518 Aquilegia oxysepala HOM05D002370 ORTHO05D003878 4.0e-41 171.4 104 87.5
Rhsim11G0149700 Rhododendron simsii HOM05D002370 ORTHO05D003878 5.3e-41 171.0 104 83.7
PGR142G4285 Punica granatum HOM05D002370 ORTHO05D003878 6.9e-41 170.6 104 83.7
Aa31LG10G4090 Aethionema arabicum HOM05D002370 ORTHO05D003878 1.2e-40 169.9 104 79.8
Sc18g0007320 Simmondsia chinensis HOM05D002370 ORTHO05D003878 1.2e-40 169.9 104 84.6
DCAR_021938 Daucus carota HOM05D002370 ORTHO05D003878 1.5e-40 169.5 106 80.2
A05p20360 Brassica napus HOM05D002370 ORTHO05D003878 2.0e-40 169.1 110 80.9
C05p34110 Brassica napus HOM05D002370 ORTHO05D003878 2.0e-40 169.1 110 80.9
CDE06G2553 Ceratophyllum demersum HOM05D002370 ORTHO05D003878 2.0e-40 169.1 104 84.6
Nn5g30713 Nelumbo nucifera HOM05D002370 ORTHO05D003878 2.6e-40 168.7 104 81.7
Sabra09G0065200 Salix brachista HOM05D002370 ORTHO05D003878 2.6e-40 168.7 104 81.7
PSO541G1630 Papaver somniferum HOM05D002370 ORTHO05D003878 3.4e-40 168.3 104 84.6
PSO675G4735 Papaver somniferum HOM05D002370 ORTHO05D003878 3.4e-40 168.3 104 84.6
BolC5t32146H Brassica oleracea HOM05D002370 ORTHO05D003878 5.8e-40 167.5 114 78.1
BraA05t20943Z Brassica rapa HOM05D002370 ORTHO05D003878 5.8e-40 167.5 114 78.1
BraA06t23548Z Brassica rapa HOM05D002370 ORTHO05D003878 7.6e-40 167.2 110 80.0
BolC6t35612H Brassica oleracea HOM05D002370 ORTHO05D003878 2.2e-39 165.6 110 79.1
TAR381G0773 Trochodendron aralioides HOM05D002370 ORTHO05D003878 2.2e-39 165.6 111 78.4
DCAR_003604 Daucus carota HOM05D002370 ORTHO05D003878 1.1e-38 163.3 130 69.2
PSO675G3080 Papaver somniferum HOM05D002370 ORTHO05D003878 1.9e-38 162.5 104 83.7
PSO732G0082 Papaver somniferum HOM05D002370 ORTHO05D003878 1.9e-38 162.5 104 83.7
SEGI_21899 Sequoiadendron giganteum HOM05D002370 ORTHO05D003878 2.4e-38 162.2 101 85.1
ATR0753G079 Amborella trichopoda HOM05D002370 ORTHO05D003878 1.2e-37 159.8 104 80.8
HPP92_016412 Vanilla planifolia HOM05D002370 ORTHO05D003878 1.2e-37 159.8 91 89.0
Os05g0235300 Oryza sativa ssp. japonica HOM05D002370 ORTHO05D003878 2.7e-37 158.7 102 81.4
SEGI_07133 Sequoiadendron giganteum HOM05D002370 ORTHO05D003878 3.5e-37 158.3 101 83.2
Zm00001eb285840 Zea mays HOM05D002370 ORTHO05D003878 3.5e-37 158.3 104 79.8
unitig_60.g25464 Utricularia gibba HOM05D002370 ORTHO05D003878 6.7e-36 154.1 132 65.9
SGA_v2.0_scaffold32G12979 Striga asiatica HOM05D002370 ORTHO05D003878 4.3e-35 151.4 101 78.2
arahy.Tifrunner.gnm1.ann1.NYP183 Arachis hypogaea HOM05D002370 ORTHO05D003878 7.4e-35 150.6 104 78.8
CSS0013695 Camellia sinensis var. sinensis HOM05D002370 ORTHO05D003878 1.1e-33 146.7 81 87.7
Eucgr.C04378 Eucalyptus grandis HOM05D002370 ORTHO05D003878 1.7e-31 139.4 106 69.8
Mapoly0047s0119 Marchantia polymorpha HOM05D002370 ORTHO05D003878 2.2e-31 139.0 97 76.3
AagrBONN_evm.TU.Sc2ySwM_228.5412 Anthoceros agrestis HOM05D002370 ORTHO05D003878 8.4e-31 137.1 105 71.4
SMO147G0225 Selaginella moellendorffii HOM05D002370 ORTHO05D003878 4.2e-30 134.8 102 73.5
Pp3c6_4910 Physcomitrium patens HOM05D002370 ORTHO05D003878 5.5e-30 134.4 102 70.6
Eucgr.I02504 Eucalyptus grandis HOM05D002370 ORTHO05D003878 2.7e-29 132.1 118 60.2
Cre09.g400553 Chlamydomonas reinhardtii HOM05D002370 ORTHO05D003878 1.8e-28 129.4 101 68.3
PRCOL_00002418 Prasinoderma coloniale HOM05D002370 ORTHO05D003878 4.3e-27 124.8 89 69.7
Cfa026368 Carpinus fangiana HOM05D002370 ORTHO05D003878 1.4e-25 119.8 102 55.9
Haze_26242 Corylus avellana HOM05D002370 ORTHO05D003878 1.4e-25 119.8 105 60.0
MCO06G142 Micromonas commoda HOM05D002370 ORTHO05D003878 4.5e-24 114.8 89 66.3
MELO3C016143.2 Cucumis melo HOM05D002370 ORTHO05D003878 6.1e-21 104.4 72 79.2
BcaB02g11121 Brassica carinata HOM05D002370 ORTHO05D003878 2.3e-20 102.4 58 81.0
CDE04G3197 Ceratophyllum demersum HOM05D002370 ORTHO05D020284 6.5e-15 84.3 57 71.9
BcaB02g11124 Brassica carinata HOM05D002370 ORTHO05D003878 1.4e-14 83.2 49 77.6
SHI03324 Sapria himalayana HOM05D002370 ORTHO05D003878 2.5e-14 82.4 68 69.1
MELO3C031102.2 Cucumis melo HOM05D002370 ORTHO05D015007 8.2e-10 67.4 37 97.3
Lsat_1_v5_gn_9_85500 Lactuca sativa HOM05D006220 ORTHO05D007590 4.1e-09 65.1 42 85.7


User provided reference genes

Program Settings