Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr5.1891 Acer truncatum HOM05D000017 ORTHO05D000013 3.8e-99 364.8 176 100.0
Atru.chr4.284 Acer truncatum HOM05D000017 ORTHO05D000013 1.0e-67 260.4 231 59.3
Atru.chr7.74 Acer truncatum HOM05D000017 ORTHO05D000013 3.2e-66 255.4 231 58.9
Atru.chr6.1119 Acer truncatum HOM05D000017 ORTHO05D000013 9.5e-66 253.8 206 65.5
Atru.chr3.2126 Acer truncatum HOM05D000017 ORTHO05D000013 3.6e-41 172.2 182 53.3
Atru.chr1.2169 Acer truncatum HOM05D000017 ORTHO05D000013 1.4e-40 170.2 231 42.4
Atru.chr3.2141 Acer truncatum HOM05D000017 ORTHO05D000013 1.4e-40 170.2 196 51.0
Atru.chr9.320 Acer truncatum HOM05D000017 ORTHO05D000013 6.8e-40 167.9 219 43.8
Atru.chr7.247 Acer truncatum HOM05D000017 ORTHO05D000013 8.9e-40 167.5 231 41.6
Atru.chr4.1135 Acer truncatum HOM05D000017 ORTHO05D000013 3.4e-39 165.6 231 41.1
Atru.chr9.574 Acer truncatum HOM05D000017 ORTHO05D000013 2.4e-37 159.5 224 42.0
Atru.chr13.2247 Acer truncatum HOM05D000017 ORTHO05D000013 9.9e-31 137.5 181 42.0
Atru.chr8.851 Acer truncatum HOM05D000017 ORTHO05D000013 3.9e-27 125.6 231 36.4
Atru.chr2.1868 Acer truncatum HOM05D000017 ORTHO05D000013 5.1e-27 125.2 233 33.9
Atru.chr5.1912 Acer truncatum HOM05D000017 ORTHO05D000013 5.1e-27 125.2 114 51.8
Atru.chr5.2094 Acer truncatum HOM05D000017 ORTHO05D000013 4.0e-24 115.5 226 32.7
Atru.chr4.1206 Acer truncatum HOM05D000017 ORTHO05D000013 6.9e-24 114.8 211 36.5
Atru.chr11.417 Acer truncatum HOM05D000017 ORTHO05D000013 1.2e-23 114.0 114 50.0
Atru.chr10.302 Acer truncatum HOM05D000017 ORTHO05D000013 2.9e-22 109.4 178 36.0
Atru.chr1.2956 Acer truncatum HOM05D000017 ORTHO05D000013 7.1e-21 104.8 186 36.6
Atru.chr1.1594 Acer truncatum HOM05D000017 ORTHO05D000013 3.0e-19 99.4 183 29.5
Atru.chr10.732 Acer truncatum HOM05D000017 ORTHO05D000013 7.3e-18 94.7 185 34.1
Atru.chr4.975 Acer truncatum HOM05D000017 ORTHO05D000013 9.6e-18 94.4 226 27.0
Atru.chr1.3548 Acer truncatum HOM05D000017 ORTHO05D000013 8.1e-17 91.3 231 26.8
Atru.chr6.42 Acer truncatum HOM05D000017 ORTHO05D000013 8.1e-17 91.3 232 27.2
Atru.chr1.3834 Acer truncatum HOM05D000017 ORTHO05D000013 1.4e-16 90.5 231 26.0
Atru.chr3.4260 Acer truncatum HOM05D000017 ORTHO05D000013 4.0e-16 89.0 231 26.4
Atru.chr3.3437 Acer truncatum HOM05D000017 ORTHO05D000013 6.9e-16 88.2 232 27.2
Atru.chr6.569 Acer truncatum HOM05D000017 ORTHO05D000013 1.2e-15 87.4 49 85.7
Atru.chr12.1233 Acer truncatum HOM05D000017 ORTHO05D000013 2.0e-15 86.7 232 26.3
Atru.chr3.2988 Acer truncatum HOM05D000017 ORTHO05D000013 2.6e-15 86.3 231 25.5
Atru.chr13.2370 Acer truncatum HOM05D000017 ORTHO05D000013 4.5e-15 85.5 49 83.7
TWI18G0050 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 7.6e-15 84.7 231 25.1
TWI53G1455 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 1.7e-14 83.6 231 25.5
TWI74G0037 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 1.7e-14 83.6 231 25.5
TWI74G0899 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 1.7e-14 83.6 231 25.5
Atru.chr3.2245 Acer truncatum HOM05D000017 ORTHO05D000013 2.2e-14 83.2 49 79.6
Atru.chr9.19 Acer truncatum HOM05D000017 ORTHO05D000013 3.8e-14 82.4 49 85.7
Nitab4.5_0008756g0020 Nicotiana tabacum HOM05D007248 ORTHO05D002765 4.9e-14 82.0 149 28.2
Atru.chr2.2336 Acer truncatum HOM05D000017 ORTHO05D000013 6.4e-14 81.6 161 28.6
Atru.chr5.1934 Acer truncatum HOM05D000017 ORTHO05D000013 8.4e-14 81.3 227 25.1
HanXRQChr03g0078871 Helianthus annuus HOM05D000017 ORTHO05D000013 8.4e-14 81.3 231 24.7
Hma1.2p1_0203F.1_g086740 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 8.4e-14 81.3 160 31.9
TWI53G1561 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 8.4e-14 81.3 231 25.1
Atru.chr4.234 Acer truncatum HOM05D000017 ORTHO05D000013 1.9e-13 80.1 49 77.6
Atru.chr8.255 Acer truncatum HOM05D000017 ORTHO05D000013 1.9e-13 80.1 114 35.1
Oeu010167.1 Olea europaea HOM05D000017 ORTHO05D000013 3.2e-13 79.3 231 24.2
Atru.chr7.138 Acer truncatum HOM05D000017 ORTHO05D000013 9.3e-13 77.8 49 73.5
Thhalv10012336m.g Eutrema salsugineum HOM05D000017 ORTHO05D000013 1.2e-12 77.4 171 30.4
Atru.chr7.529 Acer truncatum HOM05D000017 ORTHO05D000013 1.6e-12 77.0 111 34.2
TWI38G1855 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 1.6e-12 77.0 231 23.4
TWI18G0436 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 2.7e-12 76.3 231 23.4
TWI63G1449 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 2.7e-12 76.3 231 23.4
TWI74G1513 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 2.7e-12 76.3 231 23.4
TWI77G0111 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 2.7e-12 76.3 231 23.4
Atru.chr1.2361 Acer truncatum HOM05D000017 ORTHO05D000013 3.5e-12 75.9 48 75.0
TWI39G1138 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 6.0e-12 75.1 231 23.4
Atru.chr1.2031 Acer truncatum HOM05D000017 ORTHO05D000013 7.9e-12 74.7 49 73.5
TWI32G1027 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 7.9e-12 74.7 115 33.9
Hma1.2p1_0877F.1_g231630 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 1.0e-11 74.3 191 26.2
Atru.chr4.526 Acer truncatum HOM05D000017 ORTHO05D000013 1.3e-11 73.9 49 69.4
CANSAT35G1887 Cannabis sativa HOM05D000017 ORTHO05D000013 1.3e-11 73.9 215 23.3
TWI39G0633 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 1.3e-11 73.9 210 25.7
TAR423G0001 Trochodendron aralioides HOM05D000017 ORTHO05D000013 1.3e-11 73.9 240 23.8
Atru.chr11.416 Acer truncatum HOM05D000017 ORTHO05D000013 1.8e-11 73.6 47 70.2
Atru.chr5.1913 Acer truncatum HOM05D000017 ORTHO05D000013 2.3e-11 73.2 49 71.4
ATR0648G001 Amborella trichopoda HOM05D000017 ORTHO05D021215 2.3e-11 73.2 229 26.2
CANSAT21G2374 Cannabis sativa HOM05D000017 ORTHO05D000013 2.3e-11 73.2 229 26.2
CANSAT64G1942 Cannabis sativa HOM05D000017 ORTHO05D000013 2.3e-11 73.2 219 24.7
TWI63G0971 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 2.3e-11 73.2 231 22.9
Nitab4.5_0009017g0010 Nicotiana tabacum HOM05D000017 ORTHO05D002765 3.0e-11 72.8 134 29.9
Sopen05g022560 Solanum pennellii HOM05D000017 ORTHO05D000013 3.0e-11 72.8 110 32.7
Atru.chr2.2320 Acer truncatum HOM05D000017 ORTHO05D000013 3.9e-11 72.4 49 71.4
Hma1.2p1_0120F.1_g057170 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 5.1e-11 72.0 188 27.1
Nitab4.5_0000709g0030 Nicotiana tabacum HOM05D000017 ORTHO05D002765 5.1e-11 72.0 134 29.1
Nitab4.5_0008791g0030 Nicotiana tabacum HOM05D007248 ORTHO05D002765 5.1e-11 72.0 111 32.4
ATR0915G001 Amborella trichopoda HOM05D000017 ORTHO05D000013 6.7e-11 71.6 200 27.5
CANSAT54G1288 Cannabis sativa HOM05D000017 ORTHO05D000013 6.7e-11 71.6 229 25.8
CANSAT64G0409 Cannabis sativa HOM05D000017 ORTHO05D000013 6.7e-11 71.6 200 23.5
Nitab4.5_0001968g0150 Nicotiana tabacum HOM05D007248 ORTHO05D002765 6.7e-11 71.6 134 29.1
Nitab4.5_0010319g0060 Nicotiana tabacum HOM05D007248 ORTHO05D002765 6.7e-11 71.6 111 32.4
Atru.chr11.1388 Acer truncatum HOM05D000017 ORTHO05D000013 8.7e-11 71.2 152 30.9
Atru.chr4.579 Acer truncatum HOM05D000017 ORTHO05D000013 1.1e-10 70.9 49 71.4
Nitab4.5_0004496g0020 Nicotiana tabacum HOM05D007248 ORTHO05D000013 1.1e-10 70.9 111 31.5
TWI18G0214 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 1.1e-10 70.9 217 23.5
Atru.chr7.592 Acer truncatum HOM05D000017 ORTHO05D000013 1.5e-10 70.5 114 31.6
TWI75G0439 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 1.5e-10 70.5 188 23.9
Atru.chr13.2210 Acer truncatum HOM05D000017 ORTHO05D000013 2.5e-10 69.7 114 31.6
TWI63G0423 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 2.5e-10 69.7 113 31.0
Nitab4.5_0007005g0050 Nicotiana tabacum HOM05D007248 ORTHO05D002765 3.3e-10 69.3 111 31.5
Nitab4.5_0008559g0020 Nicotiana tabacum HOM05D000017 ORTHO05D000013 3.3e-10 69.3 134 28.4
Oeu009213.1 Olea europaea HOM05D000017 ORTHO05D000013 3.3e-10 69.3 210 22.9
Solyc10g052716.1 Solanum lycopersicum HOM05D000017 ORTHO05D002765 3.3e-10 69.3 134 26.1
Nitab4.5_0011642g0030 Nicotiana tabacum HOM05D007248 ORTHO05D002765 4.3e-10 68.9 111 30.6
Oeu019372.1 Olea europaea HOM05D000017 ORTHO05D000013 4.3e-10 68.9 210 22.4
Oeu054336.1 Olea europaea HOM05D000017 ORTHO05D000013 4.3e-10 68.9 210 23.3
TWI34G0976 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 4.3e-10 68.9 224 24.1
Nitab4.5_0001140g0040 Nicotiana tabacum HOM05D007248 ORTHO05D002765 5.6e-10 68.6 111 35.1
Nitab4.5_0008036g0020 Nicotiana tabacum HOM05D007248 ORTHO05D002765 5.6e-10 68.6 111 30.6
Nitab4.5_0013575g0020 Nicotiana tabacum HOM05D007248 ORTHO05D002765 5.6e-10 68.6 145 26.2
Sopen10g023510 Solanum pennellii HOM05D000017 ORTHO05D000013 5.6e-10 68.6 134 25.4
Nitab4.5_0010618g0050 Nicotiana tabacum HOM05D000017 ORTHO05D000013 9.6e-10 67.8 134 28.4
CANSAT54G1361 Cannabis sativa HOM05D000017 ORTHO05D000013 1.3e-09 67.4 230 22.2
CANSAT78G0589 Cannabis sativa HOM05D000017 ORTHO05D000013 1.3e-09 67.4 114 33.3
Atru.chr10.1013 Acer truncatum HOM05D000004 ORTHO05D000002 1.6e-09 67.0 185 29.7
Nitab4.5_0009030g0020 Nicotiana tabacum HOM05D007248 ORTHO05D000013 1.6e-09 67.0 111 30.6
Atru.chr12.2098 Acer truncatum HOM05D000017 ORTHO05D000013 2.1e-09 66.6 156 26.3
Atru.chr3.2307 Acer truncatum HOM05D000017 ORTHO05D000013 2.1e-09 66.6 211 22.7
Nitab4.5_0003730g0050 Nicotiana tabacum HOM05D000017 ORTHO05D002765 2.1e-09 66.6 111 29.7
TWI34G1566 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 2.1e-09 66.6 231 22.1
Hma1.2p1_0461F.1_g157770 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 2.8e-09 66.2 220 26.4
PSO339G5939 Papaver somniferum HOM05D000017 ORTHO05D000013 2.8e-09 66.2 214 23.8
Atru.chr12.1830 Acer truncatum HOM05D000017 ORTHO05D000013 3.7e-09 65.9 130 30.0
CAN.G162.2 Capsicum annuum HOM05D005506 ORTHO05D004172 3.7e-09 65.9 204 25.0
Nitab4.5_0000692g0140 Nicotiana tabacum HOM05D007248 ORTHO05D002765 4.8e-09 65.5 111 32.4
Atru.chr7.7 Acer truncatum HOM05D000017 ORTHO05D000013 6.2e-09 65.1 198 27.3
BolC1t01560H Brassica oleracea HOM05D000017 ORTHO05D000013 6.2e-09 65.1 168 26.2
C07p17520 Brassica napus HOM05D015473 ORTHO05D011560 8.1e-09 64.7 113 31.0
BolC7t42260H Brassica oleracea HOM05D015473 ORTHO05D011560 8.1e-09 64.7 113 31.0
TWI77G0144 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 8.1e-09 64.7 212 23.6
Atru.chr11.608 Acer truncatum HOM05D000017 ORTHO05D000013 1.1e-08 64.3 41 70.7
Oeu027936.1 Olea europaea HOM05D000017 ORTHO05D000013 1.1e-08 64.3 210 22.4
Oeu061112.1 Olea europaea HOM05D000017 ORTHO05D000013 1.1e-08 64.3 230 23.0
A07p11640 Brassica napus HOM05D015473 ORTHO05D021626 1.4e-08 63.9 113 30.1
Nitab4.5_0000569g0080 Nicotiana tabacum HOM05D009153 ORTHO05D002765 1.4e-08 63.9 116 28.4
Oeu035486.1 Olea europaea HOM05D000017 ORTHO05D000013 1.4e-08 63.9 114 28.9
TWI75G1027 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 1.4e-08 63.9 210 23.8
Atru.chr6.209 Acer truncatum HOM05D000017 ORTHO05D000013 1.8e-08 63.5 208 22.1
CANSAT25G2383 Cannabis sativa HOM05D000017 ORTHO05D000013 1.8e-08 63.5 106 34.0
CANSAT64G0129 Cannabis sativa HOM05D000017 ORTHO05D000013 1.8e-08 63.5 114 27.2
Atru.chr7.137 Acer truncatum HOM05D000017 ORTHO05D000013 2.4e-08 63.2 114 35.1
C07p25820 Brassica napus HOM05D000017 ORTHO05D011560 2.4e-08 63.2 229 23.1
Nitab4.5_0000814g0120 Nicotiana tabacum HOM05D007248 ORTHO05D002765 2.4e-08 63.2 111 27.9
C05p35180 Brassica napus HOM05D000017 ORTHO05D000013 3.1e-08 62.8 230 22.6
Oeu048927.1 Olea europaea HOM05D000017 ORTHO05D000013 3.1e-08 62.8 199 24.6
Atru.chr2.2315 Acer truncatum HOM05D000017 ORTHO05D000013 4.0e-08 62.4 111 30.6
Dinv03568 Davidia involucrata HOM05D000017 ORTHO05D009679 4.0e-08 62.4 238 23.5
CANSAT35G1386 Cannabis sativa HOM05D000017 ORTHO05D000013 5.3e-08 62.0 187 24.1
Atru.chr8.1847 Acer truncatum HOM05D000017 ORTHO05D000013 6.9e-08 61.6 50 58.0
CANSAT11G1061 Cannabis sativa HOM05D000017 ORTHO05D000013 6.9e-08 61.6 114 30.7
Oeu058107.2 Olea europaea HOM05D000017 ORTHO05D000013 6.9e-08 61.6 231 21.2
Atru.chr6.1860 Acer truncatum HOM05D000017 ORTHO05D000013 9.0e-08 61.2 111 29.7
CANSAT80G0369 Cannabis sativa HOM05D000017 ORTHO05D000013 9.0e-08 61.2 114 30.7
Nitab4.5_0004449g0040 Nicotiana tabacum HOM05D007248 ORTHO05D002765 9.0e-08 61.2 134 29.1
Atru.chr9.236 Acer truncatum HOM05D000017 ORTHO05D000013 1.2e-07 60.8 79 36.7
Nitab4.5_0000095g0010 Nicotiana tabacum HOM05D000017 ORTHO05D000013 1.5e-07 60.5 111 31.5
Oeu009060.1 Olea europaea HOM05D000017 ORTHO05D000013 1.5e-07 60.5 114 28.1
Oeu002324.1 Olea europaea HOM05D000017 ORTHO05D000013 2.0e-07 60.1 238 21.8
MD10G1261100 Malus domestica HOM05D000017 ORTHO05D000013 2.6e-07 59.7 119 26.9
Oeu006647.1 Olea europaea HOM05D000017 ORTHO05D000013 2.6e-07 59.7 210 21.4
Oeu058708.1 Olea europaea HOM05D000017 ORTHO05D000013 3.4e-07 59.3 48 56.2
PSO017G3270 Papaver somniferum HOM05D000017 ORTHO05D000013 3.4e-07 59.3 172 29.7
Oeu033116.1 Olea europaea HOM05D000017 ORTHO05D000013 4.5e-07 58.9 48 56.2
Oeu041491.1 Olea europaea HOM05D000017 ORTHO05D000013 4.5e-07 58.9 48 56.2
Oeu043048.1 Olea europaea HOM05D000017 ORTHO05D000013 4.5e-07 58.9 48 56.2
Nitab4.5_0010885g0040 Nicotiana tabacum HOM05D007248 ORTHO05D002765 5.8e-07 58.5 86 34.9
PSO339G1085 Papaver somniferum HOM05D000017 ORTHO05D000013 7.6e-07 58.2 179 25.7
ECA246G4557 Erigeron canadensis HOM05D000017 ORTHO05D000013 9.9e-07 57.8 192 24.0
PSO761G0127 Papaver somniferum HOM05D000017 ORTHO05D000013 1.3e-06 57.4 199 25.6
Atru.chr1.2128 Acer truncatum HOM05D000017 ORTHO05D000013 1.7e-06 57.0 108 29.6
CANSAT01G2587 Cannabis sativa HOM05D000017 ORTHO05D000013 1.7e-06 57.0 170 26.5
Sopen04g011160 Solanum pennellii HOM05D000017 ORTHO05D000013 1.7e-06 57.0 209 23.0
TWI38G2350 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 1.7e-06 57.0 173 25.4
Hma1.2p1_0305F.1_g119530 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 2.2e-06 56.6 158 25.9
Oeu025849.1 Olea europaea HOM05D000017 ORTHO05D000013 2.2e-06 56.6 238 22.3
Oeu029822.1 Olea europaea HOM05D000017 ORTHO05D000013 2.2e-06 56.6 48 54.2
TWI38G0900 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 2.2e-06 56.6 48 52.1
TWI77G0746 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 2.2e-06 56.6 48 52.1
Atru.chr9.133 Acer truncatum HOM05D000017 ORTHO05D000013 2.9e-06 56.2 48 47.9
Atru.chr9.269 Acer truncatum HOM05D000017 ORTHO05D000013 2.9e-06 56.2 48 50.0
Thhalv10002846m.g Eutrema salsugineum HOM05D000017 ORTHO05D000013 2.9e-06 56.2 218 25.7
Nitab4.5_0000980g0130 Nicotiana tabacum HOM05D007248 ORTHO05D002765 3.8e-06 55.8 111 29.7
Oeu005189.1 Olea europaea HOM05D000017 ORTHO05D000013 3.8e-06 55.8 48 54.2
C04p20930 Brassica napus HOM05D019822 ORTHO05D000013 4.9e-06 55.5 106 29.2
ECA238G1954 Erigeron canadensis HOM05D000017 ORTHO05D000013 4.9e-06 55.5 163 25.8
Oeu005507.1 Olea europaea HOM05D000017 ORTHO05D000013 4.9e-06 55.5 48 54.2
Oeu051010.1 Olea europaea HOM05D000017 ORTHO05D000013 4.9e-06 55.5 231 22.5
QL04p066041 Quercus lobata HOM05D000017 ORTHO05D000013 4.9e-06 55.5 202 25.2
Atru.chr5.3198 Acer truncatum HOM05D000017 ORTHO05D000013 6.4e-06 55.1 114 26.3
Oeu012401.1 Olea europaea HOM05D000017 ORTHO05D000013 6.4e-06 55.1 48 50.0
C01p09540 Brassica napus HOM05D000017 ORTHO05D000013 8.4e-06 54.7 113 28.3
Oeu031108.1 Olea europaea HOM05D000017 ORTHO05D000013 8.4e-06 54.7 231 19.0
THA.LOC104803158 Tarenaya hassleriana HOM05D000017 ORTHO05D000013 8.4e-06 54.7 228 22.4


User provided reference genes

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