Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr5.1883 Acer truncatum HOM05D000003 ORTHO05D000004 3.5e-69 264.6 116 100.0
Atru.chr9.630 Acer truncatum HOM05D000003 ORTHO05D000004 4.7e-13 78.2 47 74.5
Atru.chr2.2024 Acer truncatum HOM05D000003 ORTHO05D000004 1.4e-12 76.6 36 77.8
Atru.chr4.2769 Acer truncatum HOM05D000003 ORTHO05D000004 5.2e-12 74.7 89 44.9
Atru.chr6.2137 Acer truncatum HOM05D000003 ORTHO05D000004 5.2e-12 74.7 54 64.8
Atru.chr8.1166 Acer truncatum HOM05D003047 ORTHO05D000627 1.2e-11 73.6 54 61.1
Atru.chr1.787 Acer truncatum HOM05D002354 ORTHO05D002259 2.0e-11 72.8 41 61.0
Atru.chr2.2564 Acer truncatum HOM05D000003 ORTHO05D000004 2.0e-11 72.8 54 61.1
Atru.chr11.881 Acer truncatum HOM05D000003 ORTHO05D000004 4.4e-11 71.6 47 61.7
Atru.chr3.2588 Acer truncatum HOM05D000003 ORTHO05D000022 4.4e-11 71.6 61 55.7
Atru.chr6.295 Acer truncatum HOM05D000003 ORTHO05D002259 4.4e-11 71.6 73 45.2
Atru.chr1.3579 Acer truncatum HOM05D000003 ORTHO05D000004 5.7e-11 71.2 71 47.9
Atru.chr2.2918 Acer truncatum HOM05D000003 ORTHO05D000004 7.5e-11 70.9 105 39.0
Atru.chr4.2177 Acer truncatum HOM05D000003 ORTHO05D000004 7.5e-11 70.9 54 63.0
Atru.chr1.3207 Acer truncatum HOM05D000003 ORTHO05D000004 9.8e-11 70.5 42 66.7
Atru.chr6.307 Acer truncatum HOM05D000003 ORTHO05D000004 2.2e-10 69.3 70 50.0
Aqoxy5G02950 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 2.2e-10 69.3 76 36.8
Atru.chr10.949 Acer truncatum HOM05D000003 ORTHO05D000004 4.8e-10 68.2 74 47.3
Atru.chr1.2043 Acer truncatum HOM05D000003 ORTHO05D000004 6.3e-10 67.8 45 57.8
Atru.chr8.876 Acer truncatum HOM05D000003 ORTHO05D000004 8.3e-10 67.4 75 48.0
Atru.chr13.1556 Acer truncatum HOM05D000003 ORTHO05D000004 1.8e-09 66.2 45 64.4
Atru.chr4.2197 Acer truncatum HOM05D000003 ORTHO05D000004 1.8e-09 66.2 68 44.1
QL06p010043 Quercus lobata HOM05D000003 ORTHO05D000004 1.8e-09 66.2 92 43.5
QL11p057128 Quercus lobata HOM05D000003 ORTHO05D000004 1.8e-09 66.2 129 33.3
Atru.chr6.171 Acer truncatum HOM05D000003 ORTHO05D000004 2.4e-09 65.9 72 45.8
Atru.chr2.910 Acer truncatum HOM05D000003 ORTHO05D000004 4.1e-09 65.1 45 55.6
Atru.chr6.184 Acer truncatum HOM05D000003 ORTHO05D002259 4.1e-09 65.1 43 62.8
QL09p047247 Quercus lobata HOM05D000003 ORTHO05D001231 4.1e-09 65.1 92 42.4
Atru.chr4.3084 Acer truncatum HOM05D000003 ORTHO05D000004 5.4e-09 64.7 85 37.6
Atru.chr2.1145 Acer truncatum HOM05D000003 ORTHO05D000004 7.0e-09 64.3 46 54.3
Atru.chr3.2347 Acer truncatum HOM05D000003 ORTHO05D000004 7.0e-09 64.3 68 48.5
Atru.chr7.700 Acer truncatum HOM05D000003 ORTHO05D000004 7.0e-09 64.3 67 46.3
QL04p052291 Quercus lobata HOM05D004322 ORTHO05D005033 7.0e-09 64.3 92 42.4
Atru.chr12.2402 Acer truncatum HOM05D000003 ORTHO05D002259 9.1e-09 63.9 92 35.9
Atru.chr3.1820 Acer truncatum HOM05D000003 ORTHO05D000004 9.1e-09 63.9 72 44.4
PSO478G1255 Papaver somniferum HOM05D000003 ORTHO05D000004 9.1e-09 63.9 47 57.4
QL05p086823 Quercus lobata HOM05D000003 ORTHO05D000004 9.1e-09 63.9 92 41.3
QL12p026404 Quercus lobata HOM05D000003 ORTHO05D000004 9.1e-09 63.9 92 41.3
Atru.chr1.2408 Acer truncatum HOM05D000003 ORTHO05D000004 1.2e-08 63.5 68 48.5
Atru.chr10.514 Acer truncatum HOM05D000003 ORTHO05D000004 1.2e-08 63.5 59 49.2
Atru.chr10.61 Acer truncatum HOM05D000003 ORTHO05D000004 1.2e-08 63.5 73 42.5
Atru.chr2.282 Acer truncatum HOM05D000003 ORTHO05D000004 1.2e-08 63.5 44 63.6
Atru.chr4.2622 Acer truncatum HOM05D000003 ORTHO05D000004 1.2e-08 63.5 59 50.8
Atru.chr6.612 Acer truncatum HOM05D000003 ORTHO05D000004 1.2e-08 63.5 74 41.9
Atru.chr3.3329 Acer truncatum HOM05D000003 ORTHO05D002259 1.6e-08 63.2 71 45.1
Atru.chr6.600 Acer truncatum HOM05D000003 ORTHO05D002259 1.6e-08 63.2 75 41.3
Atru.chr1.2519 Acer truncatum HOM05D000003 ORTHO05D002259 2.0e-08 62.8 72 40.3
Atru.chr2.915 Acer truncatum HOM05D000003 ORTHO05D000004 2.7e-08 62.4 86 39.5
Atru.chr6.102 Acer truncatum HOM05D000003 ORTHO05D000004 2.7e-08 62.4 53 50.9
Atru.chr6.1410 Acer truncatum HOM05D000003 ORTHO05D000004 2.7e-08 62.4 67 43.3
PSO210G3134 Papaver somniferum HOM05D000003 ORTHO05D000004 2.7e-08 62.4 57 47.4
Atru.chr11.2510 Acer truncatum HOM05D000003 ORTHO05D000004 3.5e-08 62.0 69 46.4
QL10p005473 Quercus lobata HOM05D000230 ORTHO05D000176 3.5e-08 62.0 85 42.4
GSVIVG01004252001 Vitis vinifera HOM05D000003 ORTHO05D000004 3.5e-08 62.0 48 43.8
Atru.chr10.984 Acer truncatum HOM05D000502 ORTHO05D002259 4.5e-08 61.6 46 47.8
Atru.chr2.253 Acer truncatum HOM05D000003 ORTHO05D000004 4.5e-08 61.6 66 45.5
QL06p025333 Quercus lobata HOM05D002747 ORTHO05D003069 4.5e-08 61.6 92 39.1
Atru.chr11.644 Acer truncatum HOM05D000003 ORTHO05D000004 5.9e-08 61.2 92 35.9
Atru.chr6.713 Acer truncatum HOM05D000003 ORTHO05D000004 5.9e-08 61.2 91 37.4
QL02p091725 Quercus lobata HOM05D000399 ORTHO05D000304 5.9e-08 61.2 98 36.7
Atru.chr10.907 Acer truncatum HOM05D000003 ORTHO05D000004 7.7e-08 60.8 72 43.1
QL04p060188 Quercus lobata HOM05D005440 ORTHO05D007314 7.7e-08 60.8 109 30.3
GSVIVG01004860001 Vitis vinifera HOM05D000660 ORTHO05D000766 7.7e-08 60.8 100 34.0
Atru.chr2.1226 Acer truncatum HOM05D000003 ORTHO05D000004 1.3e-07 60.1 47 55.3
Atru.chr11.133 Acer truncatum HOM05D000003 ORTHO05D000004 2.3e-07 59.3 44 47.7
Atru.chr6.573 Acer truncatum HOM05D000003 ORTHO05D000004 2.3e-07 59.3 67 41.8
CSS0007786 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 2.3e-07 59.3 50 52.0
PSO384G2607 Papaver somniferum HOM05D000003 ORTHO05D000004 2.3e-07 59.3 51 52.9
QL05p019557 Quercus lobata HOM05D000003 ORTHO05D000004 2.3e-07 59.3 92 40.2
Atru.chr8.2073 Acer truncatum HOM05D000003 ORTHO05D000004 3.8e-07 58.5 43 51.2
QL09p018207 Quercus lobata HOM05D000003 ORTHO05D000004 3.8e-07 58.5 104 33.7
Atru.chr12.2307 Acer truncatum HOM05D000003 ORTHO05D002259 5.0e-07 58.2 60 41.7
Atru.chr2.1976 Acer truncatum HOM05D000003 ORTHO05D000004 6.6e-07 57.8 47 51.1
Aqoxy1G03002 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 6.6e-07 57.8 60 48.3
Aqoxy3G01394 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 6.6e-07 57.8 71 36.6
QL05p041799 Quercus lobata HOM05D006990 ORTHO05D001267 6.6e-07 57.8 70 40.0
Atru.chr2.1221 Acer truncatum HOM05D000003 ORTHO05D000004 8.6e-07 57.4 36 63.9
CSS0007662 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 8.6e-07 57.4 64 45.3
PSO063G7028 Papaver somniferum HOM05D000003 ORTHO05D000004 8.6e-07 57.4 45 51.1
PSO151G0217 Papaver somniferum HOM05D000003 ORTHO05D000004 8.6e-07 57.4 99 38.4
QL06p022829 Quercus lobata HOM05D000003 ORTHO05D000004 8.6e-07 57.4 110 34.5
Thecc.10G126700 Theobroma cacao HOM05D000003 ORTHO05D000004 8.6e-07 57.4 69 42.0
TWI36G1756 Tripterygium wilfordii HOM05D000003 ORTHO05D000004 8.6e-07 57.4 48 52.1
CANSAT01G3175 Cannabis sativa HOM05D000003 ORTHO05D000004 1.1e-06 57.0 66 40.9
MBI18_g24932_MAGBIO Magnolia biondii HOM05D004534 ORTHO05D005413 1.1e-06 57.0 62 45.2
Medtr7g055907 Medicago truncatula HOM05D000256 ORTHO05D000119 1.1e-06 57.0 57 43.9
QL04p048819 Quercus lobata HOM05D003044 ORTHO05D001869 1.1e-06 57.0 88 35.2
QL04p049165 Quercus lobata HOM05D003044 ORTHO05D001869 1.1e-06 57.0 88 35.2
Atru.chr2.2563 Acer truncatum HOM05D000003 ORTHO05D002259 1.5e-06 56.6 39 51.3
Atru.chr2.2597 Acer truncatum HOM05D000003 ORTHO05D000004 1.5e-06 56.6 38 55.3
Aqoxy2G01404 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 1.5e-06 56.6 75 37.3
Aqoxy2G01461 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 1.5e-06 56.6 75 37.3
Aqoxy7G02361 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 1.5e-06 56.6 44 45.5
CSS0033313 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 1.5e-06 56.6 50 50.0
CANSAT35G1450 Cannabis sativa HOM05D000003 ORTHO05D000004 1.5e-06 56.6 64 39.1
QL02p013964 Quercus lobata HOM05D005066 ORTHO05D006138 1.5e-06 56.6 93 35.5
Atru.chr11.768 Acer truncatum HOM05D000003 ORTHO05D002259 1.9e-06 56.2 86 40.7
Atru.chr2.3028 Acer truncatum HOM05D000003 ORTHO05D000004 1.9e-06 56.2 91 35.2
Atru.chr11.1841 Acer truncatum HOM05D000003 ORTHO05D002259 2.5e-06 55.8 75 41.3
Atru.chr4.2649 Acer truncatum HOM05D000003 ORTHO05D002259 2.5e-06 55.8 71 42.3
CSS0009894 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 2.5e-06 55.8 64 40.6
MBI17_g14629_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000004 2.5e-06 55.8 48 50.0
MD02G1293300 Malus domestica HOM05D000003 ORTHO05D000004 2.5e-06 55.8 50 50.0
PSO782G4613 Papaver somniferum HOM05D000003 ORTHO05D000004 2.5e-06 55.8 94 35.1
QL02p073935 Quercus lobata HOM05D000003 ORTHO05D000004 2.5e-06 55.8 63 42.9
QL06p044160 Quercus lobata HOM05D004524 ORTHO05D005477 2.5e-06 55.8 90 37.8
TWI36G1780 Tripterygium wilfordii HOM05D000003 ORTHO05D000004 2.5e-06 55.8 61 44.3
Aqoxy7G01788 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 3.3e-06 55.5 44 43.2
MBI16_g27832_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000004 3.3e-06 55.5 102 34.3
MD06G1023000 Malus domestica HOM05D000003 ORTHO05D000004 3.3e-06 55.5 50 48.0
Oeu044182.1 Olea europaea HOM05D000003 ORTHO05D000004 3.3e-06 55.5 103 35.0
QL12p039879 Quercus lobata HOM05D000003 ORTHO05D000004 3.3e-06 55.5 65 40.0
Atru.chr6.413 Acer truncatum HOM05D000003 ORTHO05D002259 4.2e-06 55.1 71 42.3
Aqoxy2G01919 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 4.2e-06 55.1 65 40.0
Aqoxy4G01811 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 4.2e-06 55.1 63 39.7
Aqoxy6G02429 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 4.2e-06 55.1 60 46.7
QL06p026356 Quercus lobata HOM05D000003 ORTHO05D008360 4.2e-06 55.1 80 37.5
GSVIVG01004123001 Vitis vinifera HOM05D000003 ORTHO05D000004 4.2e-06 55.1 45 48.9
Atru.chr10.989 Acer truncatum HOM05D000003 ORTHO05D000004 5.5e-06 54.7 78 35.9
Aqoxy3G01792 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 5.5e-06 54.7 46 43.5
Aqoxy3G02262 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 5.5e-06 54.7 46 41.3
Aqoxy4G01371 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 5.5e-06 54.7 41 48.8
PSO063G3902 Papaver somniferum HOM05D000003 ORTHO05D000004 5.5e-06 54.7 102 32.4
PSO513G0009 Papaver somniferum HOM05D000003 ORTHO05D000004 5.5e-06 54.7 102 31.4
GSVIVG01001301001 Vitis vinifera HOM05D005100 ORTHO05D005607 5.5e-06 54.7 77 37.7
FvH4_6g46881 Fragaria vesca HOM05D000003 ORTHO05D000022 7.2e-06 54.3 55 47.3
PSO017G1107 Papaver somniferum HOM05D000003 ORTHO05D000004 7.2e-06 54.3 52 50.0
PSO478G3492 Papaver somniferum HOM05D000003 ORTHO05D000004 7.2e-06 54.3 45 44.4
PSO561G0076 Papaver somniferum HOM05D000003 ORTHO05D000004 7.2e-06 54.3 46 43.5
QL08p023119 Quercus lobata HOM05D000064 ORTHO05D000004 7.2e-06 54.3 86 39.5
Aqoxy7G01438 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 9.5e-06 53.9 52 46.2
CSS0047492 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 9.5e-06 53.9 56 46.4
HanXRQChr07g0206811 Helianthus annuus HOM05D000003 ORTHO05D000004 9.5e-06 53.9 75 37.3
MBI19_g24051_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000004 9.5e-06 53.9 94 33.0
PSO210G2794 Papaver somniferum HOM05D000003 ORTHO05D000004 9.5e-06 53.9 74 37.8
PSO724G0774 Papaver somniferum HOM05D000003 ORTHO05D000004 9.5e-06 53.9 79 38.0
GSVIVG01037358001 Vitis vinifera HOM05D004500 ORTHO05D005775 9.5e-06 53.9 58 44.8


User provided reference genes

Program Settings