Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr5.1818 Acer truncatum HOM05D007808 ORTHO05D009895 1.2e-272 942.6 470 100.0
Ciclev10020041m.g Citrus clementina HOM05D007808 ORTHO05D009895 2.1e-173 612.8 470 65.5
Thecc.01G251900 Theobroma cacao HOM05D007808 ORTHO05D009895 3.0e-159 565.8 473 60.3
QL09p041160 Quercus lobata HOM05D007808 ORTHO05D009895 2.2e-157 559.7 472 60.0
Potri.014G192200 Populus trichocarpa HOM05D007808 ORTHO05D009895 3.4e-155 552.4 469 59.9
Manes.13G040600 Manihot esculenta HOM05D007808 ORTHO05D009895 7.2e-153 544.7 474 60.1
Gohir.D07G157600 Gossypium hirsutum HOM05D007808 ORTHO05D009895 1.4e-148 530.4 473 56.4
Gohir.A07G151000 Gossypium hirsutum HOM05D007808 ORTHO05D009895 2.2e-146 523.1 473 56.0
Duzib138G1393 Durio zibethinus HOM05D007808 ORTHO05D009895 7.2e-145 518.1 486 55.3
COL.COLO4_10584 Corchorus olitorius HOM05D007808 ORTHO05D009895 4.8e-141 505.4 492 53.9
Actinidia37545 Actinidia chinensis HOM05D007808 ORTHO05D009895 1.4e-140 503.8 469 56.1
Hma1.2p1_0273F.1_g109280 Hydrangea macrophylla HOM05D007808 ORTHO05D009895 2.6e-139 499.6 469 55.0
TWI18G1304 Tripterygium wilfordii HOM05D007808 ORTHO05D009895 2.6e-139 499.6 493 54.0
Prupe.8G216500 Prunus persica HOM05D007808 ORTHO05D009895 6.5e-138 495.0 467 55.9
Nn1g02938 Nelumbo nucifera HOM05D007808 ORTHO05D009895 3.6e-136 489.2 500 53.6
RcHm_v2.0_Chr6g0286881 Rosa chinensis HOM05D007808 ORTHO05D009895 1.8e-135 486.9 468 53.0
CANSAT01G0990 Cannabis sativa HOM05D007808 ORTHO05D009895 2.2e-133 479.9 467 53.3
Lj2C1144T6 Lonicera japonica HOM05D007808 ORTHO05D009895 6.3e-133 478.4 457 54.5
FvH4_2g20710 Fragaria vesca HOM05D007808 ORTHO05D009895 1.2e-131 474.2 465 53.1
GSVIVG01028406001 Vitis vinifera HOM05D007808 ORTHO05D009895 1.2e-131 474.2 452 55.5
TAR633G0330 Trochodendron aralioides HOM05D007808 ORTHO05D009895 1.1e-129 467.6 500 52.0
Gorai.001G180500 Gossypium raimondii HOM05D007808 ORTHO05D009895 2.2e-125 453.4 480 52.1
FAN20G2653 Fragaria x ananassa HOM05D007808 ORTHO05D009895 8.0e-120 434.9 449 50.8
FAN27G2486 Fragaria x ananassa HOM05D007808 ORTHO05D009895 1.4e-119 434.1 449 50.8
Aqoxy5G00155 Aquilegia oxysepala HOM05D007808 ORTHO05D009895 1.8e-116 423.7 466 49.6
FAN24G0750 Fragaria x ananassa HOM05D007808 ORTHO05D009895 1.2e-115 421.0 430 52.6
FAN15G3261 Fragaria x ananassa HOM05D007808 ORTHO05D009895 2.3e-114 416.8 436 51.8
PGR031G1809 Punica granatum HOM05D007808 ORTHO05D009895 2.5e-113 413.3 468 47.6
PSO832G1361 Papaver somniferum HOM05D007808 ORTHO05D009895 1.6e-112 410.6 465 47.7
HanXRQChr04g0111341 Helianthus annuus HOM05D007808 ORTHO05D009895 2.4e-108 396.7 472 46.4
CSS0046569 Camellia sinensis var. sinensis HOM05D007808 ORTHO05D009895 2.5e-105 386.7 381 55.4
CSS0017675 Camellia sinensis var. sinensis HOM05D007808 ORTHO05D009895 2.8e-104 383.3 381 55.1
AL8G16070 Arabidopsis lyrata HOM05D007808 ORTHO05D009895 6.1e-104 382.1 464 44.2
DCAR_018515 Daucus carota HOM05D007808 ORTHO05D009895 4.0e-103 379.4 442 46.2
Carub.0008s0453 Capsella rubella HOM05D007808 ORTHO05D009895 3.4e-102 376.3 466 44.6
AT5G44010 Arabidopsis thaliana HOM05D007808 ORTHO05D009895 1.3e-101 374.4 465 44.5
Solyc09g072860.2 Solanum lycopersicum HOM05D007808 ORTHO05D009895 2.2e-101 373.6 461 43.2
Migut.D00468 Erythranthe guttata HOM05D007808 ORTHO05D009895 1.1e-100 371.3 468 45.9
Sopen09g028660 Solanum pennellii HOM05D007808 ORTHO05D009895 1.1e-100 371.3 462 43.5
MBI10_g30718_MAGBIO Magnolia biondii HOM05D007808 ORTHO05D009895 1.9e-100 370.5 462 45.2
Cc01_g17900 Coffea canephora HOM05D007808 ORTHO05D009895 2.5e-97 360.1 463 44.9
THA.LOC104801132 Tarenaya hassleriana HOM05D007808 ORTHO05D009895 4.3e-97 359.4 467 42.8
A09p20750 Brassica napus HOM05D007808 ORTHO05D009895 9.5e-97 358.2 465 42.6
Oeu039657.1 Olea europaea HOM05D007808 ORTHO05D009895 2.1e-96 357.1 512 40.8
BcaB07g30982 Brassica carinata HOM05D007808 ORTHO05D009895 2.3e-95 353.6 466 42.9
BraA09t37679Z Brassica rapa HOM05D007808 ORTHO05D009895 4.0e-95 352.8 466 42.5
BcaC04g21876 Brassica carinata HOM05D007808 ORTHO05D009895 5.2e-95 352.4 465 41.7
C09p26260 Brassica napus HOM05D007808 ORTHO05D009895 5.2e-95 352.4 465 41.7
Sc05g0003060 Simmondsia chinensis HOM05D007808 ORTHO05D009895 6.8e-95 352.1 418 45.0
Sabra14G0143900 Salix brachista HOM05D007808 ORTHO05D009895 5.8e-94 349.0 327 54.7
Peaxi162Scf00415g00913 Petunia axillaris HOM05D007808 ORTHO05D009895 6.4e-93 345.5 444 43.7
SalBow4G3111 Salvia bowleyana HOM05D007808 ORTHO05D009895 6.4e-93 345.5 446 43.9
ATR0736G152 Amborella trichopoda HOM05D007808 ORTHO05D009895 2.6e-86 323.6 461 41.6
HPP92_025831 Vanilla planifolia HOM05D007808 ORTHO05D009895 2.6e-86 323.6 461 41.6
Eucgr.A01321 Eucalyptus grandis HOM05D007808 ORTHO05D009895 1.3e-85 321.2 374 46.5
PSO764G0215 Papaver somniferum HOM05D007808 ORTHO05D009895 1.9e-84 317.4 464 40.3
Nitab4.5_0010039g0030 Nicotiana tabacum HOM05D007808 ORTHO05D009895 4.1e-84 316.2 448 40.2
CARHR179280 Cardamine hirsuta HOM05D007808 ORTHO05D009895 2.7e-75 287.0 411 40.9
Haze_24684 Corylus avellana HOM05D007808 ORTHO05D009895 3.0e-74 283.5 247 61.5
Thhalv10003421m.g Eutrema salsugineum HOM05D007808 ORTHO05D009895 1.1e-73 281.6 463 37.8
CiPaw.04G189500 Carya illinoinensis HOM05D007808 ORTHO05D009895 1.5e-73 281.2 217 60.4
Nitab4.5_0000845g0040 Nicotiana tabacum HOM05D007808 ORTHO05D009895 1.5e-73 281.2 451 37.9
Lsat_1_v5_gn_8_92100 Lactuca sativa HOM05D007808 ORTHO05D009895 2.8e-72 276.9 415 39.8
SGA_v2.0_scaffold1G00644 Striga asiatica HOM05D007808 ORTHO05D009895 1.1e-71 275.0 477 36.1
BolC9t55528H Brassica oleracea HOM05D007808 ORTHO05D009895 5.3e-71 272.7 409 38.1
Os02g0814600 Oryza sativa ssp. japonica HOM05D007808 ORTHO05D009895 1.7e-69 267.7 463 35.0
Cpa.g.sc87.15 Carica papaya HOM05D007808 ORTHO05D009895 6.4e-69 265.8 249 57.0
BcaC04g21877 Brassica carinata HOM05D007808 ORTHO05D009895 4.2e-68 263.1 398 37.9
Zm00001eb191560 Zea mays HOM05D007808 ORTHO05D009895 4.6e-67 259.6 468 35.9
CAN.G1395.2 Capsicum annuum HOM05D007808 ORTHO05D009895 2.5e-57 227.3 316 43.0
Gorai.002G091900 Gossypium raimondii HOM05D007808 ORTHO05D009895 5.7e-49 199.5 245 46.5
ECA236G2323 Erigeron canadensis HOM05D000728 ORTHO05D001586 4.1e-39 166.8 259 38.6
CDE02G3651 Ceratophyllum demersum HOM05D007808 ORTHO05D009895 1.5e-38 164.9 295 35.3
CiPaw.04G189400 Carya illinoinensis HOM05D007808 ORTHO05D009895 4.1e-31 140.2 89 75.3
Gohir.D11G218200 Gossypium hirsutum HOM05D007808 ORTHO05D009895 5.7e-25 119.8 168 39.9
Sp2g08850 Schrenkiella parvula HOM05D007808 ORTHO05D009895 6.5e-21 106.3 222 32.0
AagrBONN_evm.TU.Sc2ySwM_117.2846 Anthoceros agrestis HOM05D007808 ORTHO05D009895 2.4e-15 87.8 464 22.6
SEGI_27571 Sequoiadendron giganteum HOM05D007808 ORTHO05D009895 5.9e-14 83.2 244 26.2
PGSC0003DMG400003825 Solanum tuberosum HOM05D007808 ORTHO05D009895 2.2e-13 81.3 55 60.0
Pp3c1_42330 Physcomitrium patens HOM05D007808 ORTHO05D009895 1.1e-12 79.0 470 23.2
FAN27G0174 Fragaria x ananassa HOM05D007808 ORTHO05D009895 5.5e-12 76.6 54 59.3
CANSAT56G3388 Cannabis sativa HOM05D007808 ORTHO05D009895 1.3e-08 65.5 82 41.5


User provided reference genes

Program Settings