Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr5.164 Acer truncatum HOM05D001638 ORTHO05D005197 2.8e-105 385.6 233 100.0
Ciclev10015475m.g Citrus clementina HOM05D001638 ORTHO05D005197 3.5e-68 262.3 228 75.0
Duzib132G0757 Durio zibethinus HOM05D001638 ORTHO05D005197 3.0e-59 232.6 160 75.6
Gohir.A13G033800 Gossypium hirsutum HOM05D001638 ORTHO05D005197 3.0e-59 232.6 155 77.4
Thecc.02G084000 Theobroma cacao HOM05D001638 ORTHO05D005197 2.5e-58 229.6 153 75.8
TAR629G0136 Trochodendron aralioides HOM05D001638 ORTHO05D005197 7.4e-58 228.0 155 75.5
Manes.01G272000 Manihot esculenta HOM05D001638 ORTHO05D005197 2.1e-57 226.5 157 75.2
Potri.019G085100 Populus trichocarpa HOM05D001638 ORTHO05D005197 1.1e-56 224.2 152 74.3
Gorai.013G036600 Gossypium raimondii HOM05D001638 ORTHO05D005197 1.4e-56 223.8 151 76.8
Dinv44076 Davidia involucrata HOM05D001638 ORTHO05D005197 3.4e-55 219.2 155 73.5
MD02G1217000 Malus domestica HOM05D001638 ORTHO05D005197 4.5e-55 218.8 155 72.3
COL.COLO4_25944 Corchorus olitorius HOM05D001638 ORTHO05D005197 1.1e-53 214.2 150 74.7
Dinv43635 Davidia involucrata HOM05D001638 ORTHO05D005197 1.9e-53 213.4 155 72.3
Rhsim07G0034600 Rhododendron simsii HOM05D001638 ORTHO05D005197 2.4e-53 213.0 157 68.2
GSVIVG01018246001 Vitis vinifera HOM05D001638 ORTHO05D005197 3.2e-53 212.6 146 75.3
Eucgr.F04452 Eucalyptus grandis HOM05D001638 ORTHO05D005197 5.5e-53 211.8 237 59.5
Nn6g33853 Nelumbo nucifera HOM05D001638 ORTHO05D005197 7.1e-53 211.5 155 71.0
CiPaw.14G021800 Carya illinoinensis HOM05D001638 ORTHO05D005197 1.6e-52 210.3 224 64.7
RcHm_v2.0_Chr1g0346971 Rosa chinensis HOM05D001638 ORTHO05D005197 2.1e-52 209.9 231 61.0
Actinidia40391 Actinidia chinensis HOM05D001638 ORTHO05D005197 2.7e-52 209.5 240 52.9
TAR636G3630 Trochodendron aralioides HOM05D001638 ORTHO05D005197 2.7e-52 209.5 155 70.3
CANSAT56G0649 Cannabis sativa HOM05D001638 ORTHO05D005197 3.5e-52 209.1 155 68.4
FAN10G1788 Fragaria x ananassa HOM05D001638 ORTHO05D005197 2.3e-51 206.5 231 56.7
FAN10G2339 Fragaria x ananassa HOM05D001638 ORTHO05D005197 3.0e-51 206.1 231 57.1
CSS0022011 Camellia sinensis var. sinensis HOM05D001638 ORTHO05D005197 3.9e-51 205.7 233 59.2
Cfa011091 Carpinus fangiana HOM05D001638 ORTHO05D005197 5.1e-51 205.3 141 75.2
Sp2g24540 Schrenkiella parvula HOM05D001638 ORTHO05D005197 5.1e-51 205.3 157 69.4
Prupe.2G127200 Prunus persica HOM05D001638 ORTHO05D005197 6.7e-51 204.9 240 59.6
Gohir.D13G032100 Gossypium hirsutum HOM05D001638 ORTHO05D005197 2.5e-50 203.0 246 61.0
Cc02_g24880 Coffea canephora HOM05D001638 ORTHO05D005197 4.3e-50 202.2 157 65.6
PGR031G2794 Punica granatum HOM05D001638 ORTHO05D005197 7.4e-50 201.4 152 67.8
vmacro16776 Vaccinium macrocarpon HOM05D001638 ORTHO05D005197 7.4e-50 201.4 206 63.1
Sed0004454 Sechium edule HOM05D001638 ORTHO05D005197 1.6e-49 200.3 242 51.7
FvH4_7g09810 Fragaria vesca HOM05D001638 ORTHO05D005197 2.8e-49 199.5 236 58.9
CsaV3_3G007540 Cucumis sativus L. HOM05D001638 ORTHO05D005197 1.1e-48 197.6 235 60.4
FAN03G2111 Fragaria x ananassa HOM05D001638 ORTHO05D001690 2.4e-48 196.4 150 67.3
FAN06G3795 Fragaria x ananassa HOM05D001638 ORTHO05D005197 2.4e-48 196.4 229 60.3
FAN06G4892 Fragaria x ananassa HOM05D001638 ORTHO05D005197 2.4e-48 196.4 229 60.3
MBI04_g36329_MAGBIO Magnolia biondii HOM05D001638 ORTHO05D005197 4.0e-48 195.7 258 48.1
arahy.Tifrunner.gnm1.ann1.9JI82G Arachis hypogaea HOM05D001638 ORTHO05D005197 5.3e-48 195.3 155 67.7
BraA03t13813Z Brassica rapa HOM05D001638 ORTHO05D005197 6.9e-48 194.9 157 68.8
ClCG05G000380 Citrullus lanatus HOM05D001638 ORTHO05D005197 6.9e-48 194.9 242 59.1
FAN01G1872 Fragaria x ananassa HOM05D001638 ORTHO05D005197 9.0e-48 194.5 224 60.7
MELO3C005976.2 Cucumis melo HOM05D001638 ORTHO05D005197 1.5e-47 193.7 238 57.6
Glyma.18G253900 Glycine max HOM05D001638 ORTHO05D005197 1.5e-47 193.7 155 66.5
Thhalv10004255m.g Eutrema salsugineum HOM05D001638 ORTHO05D005197 2.0e-47 193.4 157 65.0
Lj9C558G6 Lonicera japonica HOM05D001638 ORTHO05D001875 2.0e-47 193.4 152 67.8
DCAR_023354 Daucus carota HOM05D001638 ORTHO05D005197 3.4e-47 192.6 168 61.9
THA.LOC104818326 Tarenaya hassleriana HOM05D001638 ORTHO05D005197 3.4e-47 192.6 249 56.2
C07p44980 Brassica napus HOM05D001638 ORTHO05D005197 4.5e-47 192.2 158 67.1
AT5G61330 Arabidopsis thaliana HOM05D001638 ORTHO05D005197 5.8e-47 191.8 157 64.3
CARHR275090 Cardamine hirsuta HOM05D001638 ORTHO05D005197 5.8e-47 191.8 157 66.9
ECA234G3220 Erigeron canadensis HOM05D001638 ORTHO05D005197 5.8e-47 191.8 155 61.9
TWI23G0567 Tripterygium wilfordii HOM05D001638 ORTHO05D005197 7.6e-47 191.4 261 54.8
BolC7t45021H Brassica oleracea HOM05D001638 ORTHO05D005197 1.0e-46 191.0 247 61.9
A03p46940 Brassica napus HOM05D001638 ORTHO05D005197 1.3e-46 190.7 256 60.2
Migut.N01781 Erythranthe guttata HOM05D001638 ORTHO05D005197 1.3e-46 190.7 158 63.3
HanXRQChr01g0007441 Helianthus annuus HOM05D001638 ORTHO05D005197 1.3e-46 190.7 155 61.9
AL8G37990 Arabidopsis lyrata HOM05D001638 ORTHO05D005197 1.7e-46 190.3 251 57.4
Sc02g0002980 Simmondsia chinensis HOM05D001638 ORTHO05D005197 1.7e-46 190.3 235 51.5
Ca_04112_v3 Cicer arietinum L. HOM05D001638 ORTHO05D005197 2.2e-46 189.9 155 65.8
Sabra19G0096200 Salix brachista HOM05D001638 ORTHO05D005197 8.4e-46 188.0 199 55.3
MD07G1102000 Malus domestica HOM05D001638 ORTHO05D005197 1.9e-45 186.8 160 65.6
BcaB04g19906 Brassica carinata HOM05D001638 ORTHO05D005197 3.2e-45 186.0 157 66.9
Carub.0008s2200 Capsella rubella HOM05D001638 ORTHO05D005197 3.2e-45 186.0 157 63.1
HanXRQChr14g0428901 Helianthus annuus HOM05D001638 ORTHO05D005197 5.5e-45 185.3 156 60.9
VMungo1383G3402 Vigna mungo HOM05D001638 ORTHO05D005197 1.2e-44 184.1 228 49.6
arahy.Tifrunner.gnm1.ann1.MQ0E05 Arachis hypogaea HOM05D001638 ORTHO05D005197 1.6e-44 183.7 228 57.9
BcaC04g23457 Brassica carinata HOM05D001638 ORTHO05D005197 1.6e-44 183.7 158 63.3
SGA_v2.0_scaffold5G02962 Striga asiatica HOM05D001638 ORTHO05D005197 2.1e-44 183.3 158 62.0
A09p07280 Brassica napus HOM05D001638 ORTHO05D005197 3.5e-44 182.6 157 63.7
PSO541G3735 Papaver somniferum HOM05D001638 ORTHO05D005197 4.6e-44 182.2 147 61.9
C09p08140 Brassica napus HOM05D001638 ORTHO05D005197 6.0e-44 181.8 158 62.7
BolC9t53726H Brassica oleracea HOM05D001638 ORTHO05D005197 6.0e-44 181.8 158 62.7
Medtr5g064850 Medicago truncatula HOM05D001638 ORTHO05D005197 1.3e-43 180.6 229 58.1
Aa31LG11G2080 Aethionema arabicum HOM05D001638 ORTHO05D005197 1.8e-43 180.3 145 69.0
Medtr7g007890 Medicago truncatula HOM05D001638 ORTHO05D005197 1.8e-43 180.3 227 58.1
Psat0s3614g0040 Pisum sativum HOM05D001638 ORTHO05D005197 1.8e-43 180.3 234 53.4
Glyma.09G089400 Glycine max HOM05D001638 ORTHO05D005197 2.3e-43 179.9 155 62.6
SGA_v2.0_scaffold131G34466 Striga asiatica HOM05D001638 ORTHO05D005197 2.3e-43 179.9 158 61.4
LjContig00564g0006049 Lotus japonicus HOM05D001638 ORTHO05D005197 3.0e-43 179.5 241 48.5
Phvul.008G045000 Phaseolus vulgaris HOM05D001638 ORTHO05D005197 8.7e-43 177.9 226 49.1
Solyc01g090470.3 Solanum lycopersicum HOM05D001638 ORTHO05D005197 1.5e-42 177.2 145 62.8
MSTRG.12501 Avicennia marina HOM05D001638 ORTHO05D005197 1.9e-42 176.8 158 58.9
AUR62023428 Chenopodium quinoa HOM05D001638 ORTHO05D005197 3.3e-42 176.0 246 50.0
Sopen01g036260 Solanum pennellii HOM05D001638 ORTHO05D005197 3.3e-42 176.0 145 62.8
Aqoxy7G00848 Aquilegia oxysepala HOM05D001638 ORTHO05D005197 4.3e-42 175.6 156 59.6
QL04p031108 Quercus lobata HOM05D001638 ORTHO05D005197 5.7e-42 175.3 239 49.0
PGSC0003DMG400026041 Solanum tuberosum HOM05D001638 ORTHO05D005197 1.3e-41 174.1 245 51.8
PSO170G6800 Papaver somniferum HOM05D001638 ORTHO05D005197 4.8e-41 172.2 135 63.7
Lalb_Chr19g0127051 Lupinus albus HOM05D001638 ORTHO05D005197 6.3e-41 171.8 146 62.3
Ah.03g133920 Amaranthus hybridus HOM05D001638 ORTHO05D005197 1.1e-40 171.0 235 47.2
BcaC06g33229 Brassica carinata HOM05D001638 ORTHO05D005197 1.4e-40 170.6 157 63.1
Lsat_1_v5_gn_4_15080 Lactuca sativa HOM05D001638 ORTHO05D005197 1.8e-40 170.2 265 47.5
BraA09t36377Z Brassica rapa HOM05D001638 ORTHO05D005197 2.4e-40 169.9 237 52.3
Hund17077 Selenicereus undatus HOM05D001638 ORTHO05D005197 4.1e-40 169.1 285 48.1
TPR.G11809 Trifolium pratense HOM05D001638 ORTHO05D005197 1.0e-38 164.5 137 63.5
EL10Ac1g00784 Beta vulgaris HOM05D001638 ORTHO05D005197 8.5e-38 161.4 246 46.7
HPP92_024242 Vanilla planifolia HOM05D001638 ORTHO05D005197 9.3e-37 157.9 242 47.1
CDE03G0227 Ceratophyllum demersum HOM05D001638 ORTHO05D005197 1.2e-36 157.5 154 57.1
PSO017G3357 Papaver somniferum HOM05D001638 ORTHO05D005197 1.6e-36 157.1 127 63.8
Lsat_1_v5_gn_4_70960 Lactuca sativa HOM05D001638 ORTHO05D005197 4.6e-36 155.6 257 40.5
SalBow6G5432 Salvia bowleyana HOM05D001638 ORTHO05D005197 6.1e-36 155.2 160 53.8
CAN.G362.16 Capsicum annuum HOM05D001638 ORTHO05D005197 1.1e-34 151.0 123 61.8
Os01g0526200 Oryza sativa ssp. japonica HOM05D001638 ORTHO05D005197 7.4e-34 148.3 155 51.6
ATR0057G068 Amborella trichopoda HOM05D001638 ORTHO05D005197 3.7e-33 146.0 140 55.7
unitig_37.g13004 Utricularia gibba HOM05D000186 ORTHO05D001124 3.7e-33 146.0 214 43.0
Peaxi162Scf00392g00227 Petunia axillaris HOM05D001638 ORTHO05D005197 5.3e-32 142.1 119 63.0
Nitab4.5_0000914g0150 Nicotiana tabacum HOM05D001638 ORTHO05D005197 2.6e-31 139.8 150 53.3
SEGI_12976 Sequoiadendron giganteum HOM05D001638 ORTHO05D005197 8.5e-30 134.8 223 39.9
AL1G10102 Arabidopsis lyrata HOM05D001638 ORTHO05D005197 3.2e-29 132.9 110 64.5
DCAR_029773 Daucus carota HOM05D001638 ORTHO05D005197 4.2e-29 132.5 199 43.7
Zm00001eb333990 Zea mays HOM05D001638 ORTHO05D005197 6.1e-28 128.6 134 50.0
Zm00001eb127190 Zea mays HOM05D001638 ORTHO05D005197 7.4e-26 121.7 134 46.3
Actinidia12155 Actinidia chinensis HOM05D001638 ORTHO05D005197 6.5e-22 108.6 81 69.1
Thhalv10020921m.g Eutrema salsugineum HOM05D001638 ORTHO05D005197 1.1e-21 107.8 139 48.9
QL01p011221 Quercus lobata HOM05D001638 ORTHO05D005197 1.9e-21 107.1 255 35.7
MD02G1264200 Malus domestica HOM05D001638 ORTHO05D005197 7.2e-21 105.1 64 85.9
Nitab4.5_0010229g0010 Nicotiana tabacum HOM05D001638 ORTHO05D005197 9.4e-21 104.8 91 59.3
arahy.Tifrunner.gnm1.ann1.HIFV4E Arachis hypogaea HOM05D001638 ORTHO05D005197 1.5e-18 97.4 63 76.2
arahy.Tifrunner.gnm1.ann1.XG8PKW Arachis hypogaea HOM05D001638 ORTHO05D005197 3.3e-18 96.3 63 76.2
Mapoly0029s0122 Marchantia polymorpha HOM05D001638 ORTHO05D005197 5.7e-18 95.5 158 34.8
Pp3c5_7370 Physcomitrium patens HOM05D001638 ORTHO05D005197 6.3e-17 92.0 150 35.3
arahy.Tifrunner.gnm1.ann1.11FR17 Arachis hypogaea HOM05D001638 ORTHO05D005197 9.1e-16 88.2 86 57.0
SMO141G0070 Selaginella moellendorffii HOM05D001638 ORTHO05D005197 5.0e-14 82.4 150 36.0
SHI03505 Sapria himalayana HOM05D001638 ORTHO05D005197 8.5e-14 81.6 117 41.9
Cre13.g587000 Chlamydomonas reinhardtii HOM05D001638 ORTHO05D005197 4.0e-11 72.8 111 34.2
CBR_g1068 Chara braunii HOM05D001638 ORTHO05D005197 2.8e-09 66.6 183 29.0
MCO04G285 Micromonas commoda HOM05D001638 ORTHO05D005197 3.7e-09 66.2 112 31.2


User provided reference genes

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