Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr5.1434 Acer truncatum HOM05D005096 ORTHO05D006566 0.0e+00 1752.3 919 100.0
Ciclev10023868m.g Citrus clementina HOM05D005096 ORTHO05D006566 0.0e+00 1318.9 906 77.2
GSVIVG01011085001 Vitis vinifera HOM05D005096 ORTHO05D006566 0.0e+00 1213.7 898 71.8
Duzib138G0773 Durio zibethinus HOM05D005096 ORTHO05D006566 0.0e+00 1210.7 931 69.5
Cfa006136 Carpinus fangiana HOM05D005096 ORTHO05D006566 0.0e+00 1206.8 931 70.2
Potri.005G209200 Populus trichocarpa HOM05D005096 ORTHO05D006566 0.0e+00 1205.7 937 70.1
Thecc.01G279600 Theobroma cacao HOM05D005096 ORTHO05D006566 0.0e+00 1205.7 927 69.9
Dinv32937 Davidia involucrata HOM05D005096 ORTHO05D006566 0.0e+00 1204.9 895 70.7
Sabra05G0159300 Salix brachista HOM05D005096 ORTHO05D006566 0.0e+00 1197.2 932 69.7
Haze_04712 Corylus avellana HOM05D005096 ORTHO05D006566 0.0e+00 1196.0 971 68.2
Manes.05G076137 Manihot esculenta HOM05D005096 ORTHO05D006566 0.0e+00 1185.6 929 67.3
TWI23G0916 Tripterygium wilfordii HOM05D005096 ORTHO05D006566 0.0e+00 1177.5 932 69.2
CiPaw.07G091400 Carya illinoinensis HOM05D005096 ORTHO05D006566 0.0e+00 1170.6 932 68.2
Prupe.8G241300 Prunus persica HOM05D005096 ORTHO05D006566 0.0e+00 1170.6 932 68.6
COL.COLO4_09099 Corchorus olitorius HOM05D005096 ORTHO05D006566 0.0e+00 1167.5 914 68.6
CSS0045500 Camellia sinensis var. sinensis HOM05D005096 ORTHO05D006566 0.0e+00 1160.2 911 68.1
QL12p021914 Quercus lobata HOM05D005096 ORTHO05D006566 0.0e+00 1156.4 925 67.8
MD11G1286100 Malus domestica HOM05D005096 ORTHO05D006566 0.0e+00 1154.0 929 67.1
FAN20G2556 Fragaria x ananassa HOM05D005096 ORTHO05D006566 0.0e+00 1152.1 925 67.1
RcHm_v2.0_Chr6g0291071 Rosa chinensis HOM05D005096 ORTHO05D006566 0.0e+00 1152.1 929 67.1
Gorai.004G080200 Gossypium raimondii HOM05D005096 ORTHO05D006566 0.0e+00 1151.3 931 66.1
FAN15G1882 Fragaria x ananassa HOM05D005096 ORTHO05D006566 0.0e+00 1149.8 928 66.8
Duzib133G0542 Durio zibethinus HOM05D005096 ORTHO05D006566 0.0e+00 1148.7 928 66.9
FAN27G2515 Fragaria x ananassa HOM05D005096 ORTHO05D006566 0.0e+00 1146.0 925 66.6
FvH4_2g23600 Fragaria vesca HOM05D005096 ORTHO05D006566 0.0e+00 1144.4 925 66.8
TAR633G0362 Trochodendron aralioides HOM05D005096 ORTHO05D006566 0.0e+00 1118.6 897 66.3
Gohir.D08G075900 Gossypium hirsutum HOM05D005096 ORTHO05D006566 0.0e+00 1116.7 931 64.6
Actinidia09139 Actinidia chinensis HOM05D005096 ORTHO05D006566 0.0e+00 1110.5 921 64.7
Rhsim13G0024600 Rhododendron simsii HOM05D005096 ORTHO05D006566 0.0e+00 1109.7 925 64.3
CsaV3_6G037120 Cucumis sativus L. HOM05D005096 ORTHO05D006566 0.0e+00 1109.0 923 64.8
ClCG07G000240 Citrullus lanatus HOM05D005096 ORTHO05D006566 0.0e+00 1108.6 924 65.2
Actinidia00750 Actinidia chinensis HOM05D005096 ORTHO05D006566 0.0e+00 1107.8 924 64.7
vmacro02569 Vaccinium macrocarpon HOM05D005096 ORTHO05D006566 0.0e+00 1105.9 914 64.2
Lj2A1173G9 Lonicera japonica HOM05D005096 ORTHO05D006566 0.0e+00 1104.4 886 66.5
CANSAT25G0791 Cannabis sativa HOM05D005096 ORTHO05D006566 0.0e+00 1103.2 925 64.6
FAN24G2260 Fragaria x ananassa HOM05D005096 ORTHO05D006566 0.0e+00 1086.2 925 64.2
arahy.Tifrunner.gnm1.ann1.2R7T4K Arachis hypogaea HOM05D005096 ORTHO05D006566 0.0e+00 1075.1 902 64.5
Lj5g0021757 Lotus japonicus HOM05D005096 ORTHO05D006566 3.1e-311 1071.6 904 63.7
Glyma.02G147400 Glycine max HOM05D005096 ORTHO05D006566 9.9e-308 1060.1 906 63.6
Sp1g02185 Schrenkiella parvula HOM05D005096 ORTHO05D006566 6.4e-307 1057.4 923 62.1
Thhalv10006729m.g Eutrema salsugineum HOM05D005096 ORTHO05D006566 2.4e-306 1055.4 922 61.8
THA.LOC104801235 Tarenaya hassleriana HOM05D005096 ORTHO05D006566 2.7e-305 1052.0 939 62.0
Phvul.007G172000 Phaseolus vulgaris HOM05D005096 ORTHO05D006566 3.0e-304 1048.5 885 63.7
Aqoxy2G03326 Aquilegia oxysepala HOM05D005096 ORTHO05D006566 6.7e-304 1047.3 921 61.0
CARHR002500 Cardamine hirsuta HOM05D005096 ORTHO05D006566 6.7e-304 1047.3 917 61.7
AL1G12650 Arabidopsis lyrata HOM05D005096 ORTHO05D006566 3.3e-303 1045.0 920 61.3
Carub.0001s0230 Capsella rubella HOM05D005096 ORTHO05D006566 3.3e-303 1045.0 870 64.4
Glyma.10G026400 Glycine max HOM05D005096 ORTHO05D006566 3.3e-303 1045.0 910 62.9
arahy.Tifrunner.gnm1.ann1.TN9YNV Arachis hypogaea HOM05D005096 ORTHO05D006566 5.6e-303 1044.3 996 59.0
VMungo0720G0024 Vigna mungo HOM05D005096 ORTHO05D006566 7.4e-303 1043.9 920 62.1
C08p00440 Brassica napus HOM05D005096 ORTHO05D006566 1.3e-302 1043.1 915 62.8
Oeu022870.1 Olea europaea HOM05D005096 ORTHO05D006566 3.6e-302 1041.6 927 60.8
Medtr1g072270 Medicago truncatula HOM05D005096 ORTHO05D006566 5.3e-301 1037.7 882 63.2
Sed0025205 Sechium edule HOM05D005096 ORTHO05D006566 9.0e-301 1036.9 910 62.5
Sc05g0004960 Simmondsia chinensis HOM05D005096 ORTHO05D006566 2.6e-300 1035.4 915 61.0
TPR.G9125 Trifolium pratense HOM05D005096 ORTHO05D006566 5.8e-300 1034.2 867 63.6
Lsat_1_v5_gn_9_3760 Lactuca sativa HOM05D005096 ORTHO05D006566 9.9e-300 1033.5 880 63.2
DCAR_002736 Daucus carota HOM05D005096 ORTHO05D006566 1.3e-299 1033.1 930 61.4
BolC8t46843H Brassica oleracea HOM05D005096 ORTHO05D006566 4.9e-299 1031.2 915 62.2
A08p37450 Brassica napus HOM05D005096 ORTHO05D006566 1.4e-298 1029.6 913 62.1
BraA08t35643Z Brassica rapa HOM05D005096 ORTHO05D006566 1.4e-298 1029.6 913 62.1
Nitab4.5_0000458g0050 Nicotiana tabacum HOM05D005096 ORTHO05D006566 2.4e-298 1028.9 907 61.4
ECA247G0546 Erigeron canadensis HOM05D005096 ORTHO05D006566 9.3e-298 1026.9 894 61.4
Nitab4.5_0008435g0030 Nicotiana tabacum HOM05D005096 ORTHO05D006566 1.2e-297 1026.5 907 60.9
Migut.D00294 Erythranthe guttata HOM05D005096 ORTHO05D006566 1.6e-297 1026.2 917 60.3
HanXRQChr10g0282661 Helianthus annuus HOM05D005096 ORTHO05D006566 5.1e-296 1021.1 882 61.9
Hund05342 Selenicereus undatus HOM05D005096 ORTHO05D006566 7.4e-295 1017.3 899 60.3
Ca_09758_v3 Cicer arietinum L. HOM05D005096 ORTHO05D006566 3.7e-294 1015.0 906 60.5
Peaxi162Scf01607g00116 Petunia axillaris HOM05D005096 ORTHO05D006566 6.5e-291 1004.2 919 60.4
Sopen09g026860 Solanum pennellii HOM05D005096 ORTHO05D006566 6.5e-291 1004.2 911 60.5
Aa31LG1G9370 Aethionema arabicum HOM05D005096 ORTHO05D006566 3.2e-290 1001.9 936 59.7
Gohir.A08G067500 Gossypium hirsutum HOM05D005096 ORTHO05D006566 1.9e-287 992.6 798 66.3
MBI19_g21295_MAGBIO Magnolia biondii HOM05D005096 ORTHO05D006566 1.8e-285 986.1 816 64.7
PGR119G0033 Punica granatum HOM05D005096 ORTHO05D006566 1.2e-284 983.4 798 66.3
SalBow4G0282 Salvia bowleyana HOM05D005096 ORTHO05D006566 1.5e-284 983.0 905 59.3
MSTRG.21562 Avicennia marina HOM05D005096 ORTHO05D006566 7.6e-284 980.7 885 61.2
EL10Ac7g17230 Beta vulgaris HOM05D005096 ORTHO05D006566 2.9e-283 978.8 942 57.3
Ah.15g091940 Amaranthus hybridus HOM05D005096 ORTHO05D006566 9.3e-282 973.8 933 56.7
ATR0626G051 Amborella trichopoda HOM05D005096 ORTHO05D006566 1.0e-280 970.3 904 57.2
Cc01_g19500 Coffea canephora HOM05D005096 ORTHO05D006566 3.7e-278 961.8 919 59.0
Eucgr.H01482 Eucalyptus grandis HOM05D005096 ORTHO05D006566 3.1e-277 958.7 751 67.4
CAN.G242.2 Capsicum annuum HOM05D005096 ORTHO05D006566 2.9e-275 952.2 868 60.1
PSO170G0567 Papaver somniferum HOM05D005096 ORTHO05D006566 1.6e-273 946.4 901 57.8
PSO302G0140 Papaver somniferum HOM05D005096 ORTHO05D006566 7.9e-273 944.1 896 58.1
Psat6g060000 Pisum sativum HOM05D005096 ORTHO05D006566 2.7e-265 919.1 814 62.2
CDE06G0317 Ceratophyllum demersum HOM05D005096 ORTHO05D006566 4.4e-263 911.8 878 55.8
AUR62036827 Chenopodium quinoa HOM05D005096 ORTHO05D006566 6.3e-262 907.9 915 54.5
unitig_0.g1141 Utricularia gibba HOM05D005096 ORTHO05D003974 3.3e-255 885.6 895 55.9
HPP92_012091 Vanilla planifolia HOM05D003650 ORTHO05D004213 3.5e-252 875.5 872 54.5
AUR62043137 Chenopodium quinoa HOM05D005096 ORTHO05D006566 2.6e-247 859.4 886 54.1
Hma1.2p1_0257F.1_g103450 Hydrangea macrophylla HOM05D005096 ORTHO05D006566 3.1e-245 852.4 655 69.0
SGA_v2.0_scaffold1G00471 Striga asiatica HOM05D005096 ORTHO05D006566 2.6e-239 832.8 863 54.8
Solyc09g065160.4 Solanum lycopersicum HOM05D005096 ORTHO05D006566 4.4e-239 832.0 777 59.1
Os05g0390100 Oryza sativa ssp. japonica HOM05D005096 ORTHO05D006566 3.0e-232 809.3 802 54.7
AT1G03160 Arabidopsis thaliana HOM05D005096 ORTHO05D006566 2.1e-225 786.6 693 62.8
Duzib133G0424 Durio zibethinus HOM05D005096 ORTHO05D006566 9.8e-223 777.7 569 71.2
Lalb_Chr02g0142781 Lupinus albus HOM05D005096 ORTHO05D006566 2.6e-199 699.9 552 65.8
Zm00001eb287190 Zea mays HOM05D005096 ORTHO05D006566 1.3e-193 681.0 642 56.9
AagrBONN_evm.TU.Sc2ySwM_228.961 Anthoceros agrestis HOM05D005096 ORTHO05D006566 1.4e-189 667.5 883 44.3
Sabra02G0043400 Salix brachista HOM05D005096 ORTHO05D006566 2.7e-188 663.3 804 52.5
Mapoly0002s0267 Marchantia polymorpha HOM05D005096 ORTHO05D006566 1.6e-185 654.1 891 42.2
MD11G1312200 Malus domestica HOM05D005096 ORTHO05D006566 2.2e-182 643.7 710 54.1
Pp3c3_25850 Physcomitrium patens HOM05D005096 ORTHO05D006566 4.3e-178 629.4 918 41.6
Pp3c10_17390 Physcomitrium patens HOM05D005096 ORTHO05D006566 5.6e-178 629.0 893 40.4
MELO3C014401.2 Cucumis melo HOM05D005096 ORTHO05D006566 2.2e-174 617.1 477 67.1
SMO147G0152 Selaginella moellendorffii HOM05D005096 ORTHO05D006566 7.9e-156 555.4 860 40.0
MD11G1311700 Malus domestica HOM05D005096 ORTHO05D006566 1.7e-137 494.6 477 59.5
MELO3C014400.2 Cucumis melo HOM05D005096 ORTHO05D008790 2.8e-124 450.7 426 60.3
Hund05386 Selenicereus undatus HOM05D005096 ORTHO05D006566 5.6e-117 426.4 404 59.4
CBR_g4009 Chara braunii HOM05D005096 ORTHO05D006566 6.4e-113 412.9 962 33.3
PRCOL_00001755 Prasinoderma coloniale HOM05D005096 ORTHO05D006566 1.3e-110 405.2 916 32.2
Cpa.g.sc52.38 Carica papaya HOM05D005096 ORTHO05D006566 1.9e-109 401.4 310 68.7
Cpa.g.c40412 Carica papaya HOM05D005096 ORTHO05D006566 1.9e-104 384.8 290 69.0
AUR62043139 Chenopodium quinoa HOM05D005096 ORTHO05D006566 3.2e-104 384.0 349 57.6
Cre14.g616600 Chlamydomonas reinhardtii HOM05D005096 ORTHO05D006566 9.9e-98 362.5 1027 28.7
Lalb_Chr02g0142771 Lupinus albus HOM05D005096 ORTHO05D006566 2.1e-95 354.8 344 59.6
MCO02G198 Micromonas commoda HOM05D005096 ORTHO05D006566 1.5e-90 338.6 950 29.7
AUR62043138 Chenopodium quinoa HOM05D005096 ORTHO05D006566 2.6e-90 337.8 455 47.9
Cpa.g.c38803 Carica papaya HOM05D005096 ORTHO05D006566 5.6e-85 320.1 268 63.4
Migut.D00341 Erythranthe guttata HOM05D005096 ORTHO05D006566 1.7e-78 298.5 470 43.8
Potri.002G053332 Populus trichocarpa HOM05D005096 ORTHO05D006566 3.8e-73 280.8 262 59.2
MD11G1311600 Malus domestica HOM05D005096 ORTHO05D006566 1.3e-70 272.3 219 65.3
Hund05340 Selenicereus undatus HOM05D005096 ORTHO05D006566 1.2e-63 249.2 182 71.4
Sabra05G0150000 Salix brachista HOM05D005096 ORTHO05D006566 1.3e-60 239.2 159 76.7
MD11G1311400 Malus domestica HOM05D005096 ORTHO05D006566 8.4e-57 226.5 393 41.7
Potri.002G053366 Populus trichocarpa HOM05D005096 ORTHO05D006566 4.2e-56 224.2 172 68.6
SEGI_13636 Sequoiadendron giganteum HOM05D005096 ORTHO05D006566 1.6e-55 222.2 266 45.1
SEGI_14404 Sequoiadendron giganteum HOM05D005096 ORTHO05D006566 6.7e-54 216.9 324 42.0
Cpa.g.c44243 Carica papaya HOM05D005096 ORTHO05D006566 4.2e-48 197.6 133 76.7
arahy.Tifrunner.gnm1.ann1.VTSW9N Arachis hypogaea HOM05D005096 ORTHO05D006566 4.1e-43 181.0 133 68.4
Cpa.g.sc370.1 Carica papaya HOM05D005096 ORTHO05D006566 2.3e-38 165.2 171 62.6
MD00G1063200 Malus domestica HOM05D005096 ORTHO05D006566 3.0e-38 164.9 129 69.0
SEGI_20481 Sequoiadendron giganteum HOM05D005096 ORTHO05D006566 5.3e-35 154.1 177 44.1
Glyma.18G167550 Glycine max HOM05D005096 ORTHO05D006566 1.5e-29 136.0 97 75.3
TAR362G0796 Trochodendron aralioides HOM05D005096 ORTHO05D006566 3.3e-29 134.8 94 75.5
PGSC0003DMG400012881 Solanum tuberosum HOM05D005096 ORTHO05D006566 6.3e-28 130.6 160 50.6
arahy.Tifrunner.gnm1.ann1.X3UYKF Arachis hypogaea HOM05D005525 ORTHO05D006341 5.9e-18 97.4 95 60.0
SEGI_37612 Sequoiadendron giganteum HOM05D005096 ORTHO05D006566 1.3e-17 96.3 197 32.0
Hund05341 Selenicereus undatus HOM05D005096 ORTHO05D006566 2.9e-17 95.1 63 77.8
arahy.Tifrunner.gnm1.ann1.BB9JSJ Arachis hypogaea HOM05D000384 ORTHO05D000468 1.9e-16 92.4 92 57.6
arahy.Tifrunner.gnm1.ann1.K3B567 Arachis hypogaea HOM05D005525 ORTHO05D006341 2.1e-15 89.0 137 42.3
arahy.Tifrunner.gnm1.ann1.Y3S9ZW Arachis hypogaea HOM05D005525 ORTHO05D006341 6.1e-15 87.4 119 48.7
MD11G1311300 Malus domestica HOM05D005096 ORTHO05D006566 1.0e-14 86.7 76 64.5
SEGI_24308 Sequoiadendron giganteum HOM05D005096 ORTHO05D006566 5.2e-14 84.3 57 73.7
arahy.Tifrunner.gnm1.ann1.8W9TWR Arachis hypogaea HOM05D005096 ORTHO05D006566 1.3e-12 79.7 60 66.7
Hma1.2p1_0536F.1_g174110 Hydrangea macrophylla HOM05D005096 ORTHO05D006214 1.8e-11 75.9 106 42.5
SEGI_40401 Sequoiadendron giganteum HOM05D005096 ORTHO05D006566 1.2e-10 73.2 105 40.0


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