Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr5.1411 Acer truncatum HOM05D004804 ORTHO05D005882 6.3e-241 837.0 423 100.0
CDE08G0350 Ceratophyllum demersum HOM05D004804 ORTHO05D005882 3.4e-21 107.1 100 54.0
Cfa017439 Carpinus fangiana HOM05D004804 ORTHO05D005882 4.5e-21 106.7 57 82.5
GSVIVG01025612001 Vitis vinifera HOM05D004804 ORTHO05D005882 4.5e-21 106.7 57 84.2
Atru.chr8.1921 Acer truncatum HOM05D004804 ORTHO05D005882 5.9e-21 106.3 57 84.2
Haze_20724 Corylus avellana HOM05D004804 ORTHO05D005882 7.7e-21 105.9 57 82.5
FAN09G0808 Fragaria x ananassa HOM05D004804 ORTHO05D005882 7.7e-21 105.9 83 63.9
Gohir.D04G118600 Gossypium hirsutum HOM05D004804 ORTHO05D005882 7.7e-21 105.9 88 59.1
Gorai.009G423800 Gossypium raimondii HOM05D004804 ORTHO05D005882 7.7e-21 105.9 88 59.1
Nitab4.5_0002995g0070 Nicotiana tabacum HOM05D004804 ORTHO05D005882 7.7e-21 105.9 116 48.3
Sabra06G0079000 Salix brachista HOM05D004804 ORTHO05D005882 7.7e-21 105.9 57 80.7
Sed0001519 Sechium edule HOM05D004804 ORTHO05D005882 7.7e-21 105.9 57 80.7
Gohir.A04G079400 Gossypium hirsutum HOM05D004804 ORTHO05D005882 1.0e-20 105.5 88 58.0
RcHm_v2.0_Chr3g0467571 Rosa chinensis HOM05D004804 ORTHO05D005882 1.0e-20 105.5 57 82.5
CANSAT80G2153 Cannabis sativa HOM05D004804 ORTHO05D005882 1.3e-20 105.1 57 82.5
Eucgr.K03171 Eucalyptus grandis HOM05D004804 ORTHO05D005882 1.3e-20 105.1 57 82.5
COL.COLO4_14869 Corchorus olitorius HOM05D004804 ORTHO05D005882 1.7e-20 104.8 57 82.5
Dinv37213 Davidia involucrata HOM05D004804 ORTHO05D005882 1.7e-20 104.8 57 80.7
Hma1.2p1_1481F.1_g286070 Hydrangea macrophylla HOM05D004804 ORTHO05D005882 1.7e-20 104.8 57 82.5
Potri.016G120900 Populus trichocarpa HOM05D004804 ORTHO05D005882 1.7e-20 104.8 57 80.7
QL07p046693 Quercus lobata HOM05D004804 ORTHO05D005882 1.7e-20 104.8 57 82.5
Actinidia19758 Actinidia chinensis HOM05D004804 ORTHO05D001149 2.2e-20 104.4 60 78.3
Aa31LG5G22830 Aethionema arabicum HOM05D004804 ORTHO05D005882 2.2e-20 104.4 57 84.2
ClCG04G008480 Citrullus lanatus HOM05D004804 ORTHO05D005882 2.2e-20 104.4 57 78.9
Cc06_g03070 Coffea canephora HOM05D004804 ORTHO05D005882 2.2e-20 104.4 57 80.7
MELO3C003100.2 Cucumis melo HOM05D004804 ORTHO05D005882 2.2e-20 104.4 57 78.9
CsaV3_4G024670 Cucumis sativus L. HOM05D004804 ORTHO05D005882 2.2e-20 104.4 57 78.9
Nitab4.5_0004851g0050 Nicotiana tabacum HOM05D004804 ORTHO05D005882 2.2e-20 104.4 110 51.8
PGR004G0439 Punica granatum HOM05D004804 ORTHO05D005882 2.2e-20 104.4 57 80.7
C08p28920 Brassica napus HOM05D004804 ORTHO05D005882 2.9e-20 104.0 75 65.3
CSS0039312 Camellia sinensis var. sinensis HOM05D004804 ORTHO05D001149 2.9e-20 104.0 102 55.9
ECA238G1409 Erigeron canadensis HOM05D004804 ORTHO05D005882 2.9e-20 104.0 100 56.0
Thhalv10016845m.g Eutrema salsugineum HOM05D004804 ORTHO05D005882 2.9e-20 104.0 57 82.5
FvH4_6g14490 Fragaria vesca HOM05D004804 ORTHO05D005882 2.9e-20 104.0 57 80.7
FAN02G1589 Fragaria x ananassa HOM05D004804 ORTHO05D005882 2.9e-20 104.0 57 80.7
FAN14G5408 Fragaria x ananassa HOM05D004804 ORTHO05D005882 2.9e-20 104.0 57 80.7
Oeu029811.2 Olea europaea HOM05D004804 ORTHO05D005882 2.9e-20 104.0 88 58.0
PSO339G6548 Papaver somniferum HOM05D004804 ORTHO05D005882 2.9e-20 104.0 57 82.5
PSO384G4865 Papaver somniferum HOM05D004804 ORTHO05D005882 2.9e-20 104.0 57 82.5
Peaxi162Scf00039g00093 Petunia axillaris HOM05D004804 ORTHO05D005882 2.9e-20 104.0 57 78.9
Sp4g19750 Schrenkiella parvula HOM05D004804 ORTHO05D005882 2.9e-20 104.0 57 82.5
Hund13338 Selenicereus undatus HOM05D004804 ORTHO05D005882 2.9e-20 104.0 57 80.7
Actinidia05292 Actinidia chinensis HOM05D004804 ORTHO05D005882 3.8e-20 103.6 57 80.7
EL10Ac2g02842 Beta vulgaris HOM05D004804 ORTHO05D005882 3.8e-20 103.6 57 82.5
BcaB01g00261 Brassica carinata HOM05D004804 ORTHO05D005882 3.8e-20 103.6 75 66.7
BcaNung07017 Brassica carinata HOM05D004804 ORTHO05D005882 3.8e-20 103.6 75 66.7
Prupe.6G249100 Prunus persica HOM05D004804 ORTHO05D005882 3.8e-20 103.6 57 78.9
SGA_v2.0_scaffold126G33837 Striga asiatica HOM05D004804 ORTHO05D005882 3.8e-20 103.6 57 78.9
Ah.10g030750 Amaranthus hybridus HOM05D004804 ORTHO05D005882 5.0e-20 103.2 57 82.5
Aqoxy4G03017 Aquilegia oxysepala HOM05D004804 ORTHO05D005882 5.0e-20 103.2 57 82.5
BcaC07g39720 Brassica carinata HOM05D004804 ORTHO05D005882 5.0e-20 103.2 75 65.3
BcaNung07160 Brassica carinata HOM05D004804 ORTHO05D005882 5.0e-20 103.2 75 65.3
A09p46600 Brassica napus HOM05D004804 ORTHO05D005882 5.0e-20 103.2 75 65.3
BolC4t22652H Brassica oleracea HOM05D004804 ORTHO05D005882 5.0e-20 103.2 57 78.9
BolC8t50494H Brassica oleracea HOM05D004804 ORTHO05D005882 5.0e-20 103.2 75 65.3
BraA09t40124Z Brassica rapa HOM05D004804 ORTHO05D005882 5.0e-20 103.2 75 65.3
CAN.G125.11 Capsicum annuum HOM05D004804 ORTHO05D005882 5.0e-20 103.2 57 77.2
Cpa.g.c31068.3 Carica papaya HOM05D004804 ORTHO05D005882 5.0e-20 103.2 57 77.2
CiPaw.09G187800 Carya illinoinensis HOM05D004804 ORTHO05D005882 5.0e-20 103.2 57 80.7
Migut.L01624 Erythranthe guttata HOM05D004804 ORTHO05D005882 5.0e-20 103.2 57 78.9
Manes.08G076545 Manihot esculenta HOM05D004804 ORTHO05D005882 5.0e-20 103.2 57 78.9
THA.LOC104806587 Tarenaya hassleriana HOM05D004804 ORTHO05D005882 5.0e-20 103.2 57 82.5
Nitab4.5_0005039g0030 Nicotiana tabacum HOM05D004804 ORTHO05D005882 6.5e-20 102.8 83 60.2
SalBow4G1685 Salvia bowleyana HOM05D004804 ORTHO05D005882 6.5e-20 102.8 57 78.9
Thecc.05G045900 Theobroma cacao HOM05D004804 ORTHO05D005882 6.5e-20 102.8 57 78.9
TWI53G1005 Tripterygium wilfordii HOM05D004804 ORTHO05D005882 6.5e-20 102.8 57 80.7
AUR62037218 Chenopodium quinoa HOM05D004804 ORTHO05D005882 8.5e-20 102.4 57 80.7
Potri.006G102700 Populus trichocarpa HOM05D004804 ORTHO05D005882 8.5e-20 102.4 55 80.0
Solyc09g005700.3 Solanum lycopersicum HOM05D004804 ORTHO05D005882 8.5e-20 102.4 57 77.2
Sopen09g001590 Solanum pennellii HOM05D004804 ORTHO05D005882 8.5e-20 102.4 57 77.2
AUR62014235 Chenopodium quinoa HOM05D004804 ORTHO05D005882 1.1e-19 102.1 57 80.7
Thhalv10010477m.g Eutrema salsugineum HOM05D004804 ORTHO05D005882 1.1e-19 102.1 57 78.9
HanXRQChr14g0453791 Helianthus annuus HOM05D004804 ORTHO05D005882 1.1e-19 102.1 66 71.2
MD07G1084600 Malus domestica HOM05D004804 ORTHO05D005882 1.1e-19 102.1 57 77.2
Sp5g08760 Schrenkiella parvula HOM05D004804 ORTHO05D005882 1.1e-19 102.1 75 64.0
A05p08530 Brassica napus HOM05D004804 ORTHO05D005882 1.4e-19 101.7 57 78.9
BraA05t19821Z Brassica rapa HOM05D004804 ORTHO05D005882 1.4e-19 101.7 57 78.9
Lsat_1_v5_gn_2_111181 Lactuca sativa HOM05D004804 ORTHO05D005882 1.4e-19 101.7 57 80.7
Phvul.001G170900 Phaseolus vulgaris HOM05D004804 ORTHO05D005882 1.4e-19 101.7 92 54.3
C04p10610 Brassica napus HOM05D004804 ORTHO05D005882 1.9e-19 101.3 57 77.2
CARHR163490 Cardamine hirsuta HOM05D004804 ORTHO05D005882 1.9e-19 101.3 57 78.9
Migut.J00372 Erythranthe guttata HOM05D004804 ORTHO05D005882 1.9e-19 101.3 57 77.2
Psat3g121680 Pisum sativum HOM05D004804 ORTHO05D005882 1.9e-19 101.3 102 51.0
Rhsim05G0187300 Rhododendron simsii HOM05D004804 ORTHO05D005882 1.9e-19 101.3 57 77.2
vmacro20115 Vaccinium macrocarpon HOM05D004804 ORTHO05D005882 1.9e-19 101.3 57 77.2
Carub.0005s2015 Capsella rubella HOM05D004804 ORTHO05D005882 2.5e-19 100.9 91 57.1
Zm00001eb136710 Zea mays HOM05D004804 ORTHO05D005882 2.5e-19 100.9 66 68.2
MSTRG.5692 Avicennia marina HOM05D004804 ORTHO05D005882 3.2e-19 100.5 57 78.9
BcaB02g07773 Brassica carinata HOM05D004804 ORTHO05D005882 3.2e-19 100.5 57 78.9
Ciclev10012025m.g Citrus clementina HOM05D004804 ORTHO05D005882 3.2e-19 100.5 57 75.4
Sc01g0003910 Simmondsia chinensis HOM05D004804 ORTHO05D005882 3.2e-19 100.5 57 78.9
AL5G34510 Arabidopsis lyrata HOM05D004804 ORTHO05D005882 4.2e-19 100.1 57 77.2
AT3G53580 Arabidopsis thaliana HOM05D004804 ORTHO05D005882 4.2e-19 100.1 57 77.2
A07p21740 Brassica napus HOM05D004804 ORTHO05D005882 4.2e-19 100.1 57 77.2
BolC6t37342H Brassica oleracea HOM05D004804 ORTHO05D005882 4.2e-19 100.1 57 77.2
Duzib093G1125 Durio zibethinus HOM05D004804 ORTHO05D005882 4.2e-19 100.1 88 56.8
Lj2A100T74 Lonicera japonica HOM05D004804 ORTHO05D005882 4.2e-19 100.1 57 78.9
Nn2g12889 Nelumbo nucifera HOM05D004804 ORTHO05D005882 4.2e-19 100.1 57 77.2
TAR623G1260 Trochodendron aralioides HOM05D004804 ORTHO05D005882 4.2e-19 100.1 57 78.9
VMungo1383G1812 Vigna mungo HOM05D004804 ORTHO05D005882 4.2e-19 100.1 92 53.3
ATR0033G037 Amborella trichopoda HOM05D004804 ORTHO05D005882 5.5e-19 99.8 57 77.2
arahy.Tifrunner.gnm1.ann1.EYL599 Arachis hypogaea HOM05D004804 ORTHO05D005882 5.5e-19 99.8 57 75.4
AUR62026834 Chenopodium quinoa HOM05D004804 ORTHO05D005882 5.5e-19 99.8 57 78.9
Ca_07739_v3 Cicer arietinum L. HOM05D004804 ORTHO05D005882 5.5e-19 99.8 102 52.0
Ca_08795_v3 Cicer arietinum L. HOM05D004804 ORTHO05D005882 5.5e-19 99.8 57 75.4
MD12G1136700 Malus domestica HOM05D004804 ORTHO05D005882 7.2e-19 99.4 57 75.4
BraA07t29856Z Brassica rapa HOM05D004804 ORTHO05D005882 9.4e-19 99.0 57 75.4
MD04G1119400 Malus domestica HOM05D004804 ORTHO05D005882 9.4e-19 99.0 57 75.4
BcaC08g44637 Brassica carinata HOM05D004804 ORTHO05D005882 1.2e-18 98.6 57 75.4
C06p21540 Brassica napus HOM05D004804 ORTHO05D005882 1.2e-18 98.6 57 75.4
TPR.G21455 Trifolium pratense HOM05D004804 ORTHO05D005882 1.2e-18 98.6 93 51.6
Zm00001eb028810 Zea mays HOM05D004804 ORTHO05D005882 1.6e-18 98.2 66 66.7
FvH4_5g27660 Fragaria vesca HOM05D004804 ORTHO05D005882 2.1e-18 97.8 57 75.4
Lj1g0023900 Lotus japonicus HOM05D004804 ORTHO05D005882 2.1e-18 97.8 57 71.9
Medtr7g100345 Medicago truncatula HOM05D004804 ORTHO05D005882 2.1e-18 97.8 93 52.7
SalBow1G1981 Salvia bowleyana HOM05D004804 ORTHO05D005882 2.1e-18 97.8 57 73.7
Lalb_Chr25g0289471 Lupinus albus HOM05D004804 ORTHO05D005882 3.6e-18 97.1 57 73.7
Glyma.03G173400 Glycine max HOM05D004804 ORTHO05D005882 6.1e-18 96.3 57 71.9
Glyma.19G174300 Glycine max HOM05D004804 ORTHO05D005882 7.9e-18 95.9 57 70.2
Lalb_Chr20g0113121 Lupinus albus HOM05D004804 ORTHO05D005882 1.4e-17 95.1 57 70.2
FAN18G1921 Fragaria x ananassa HOM05D004804 ORTHO05D005882 1.8e-17 94.7 58 72.4
HPP92_019459 Vanilla planifolia HOM05D004804 ORTHO05D005882 1.8e-17 94.7 57 70.2
DCAR_009258 Daucus carota HOM05D004804 ORTHO05D005882 3.0e-17 94.0 57 70.2
AagrBONN_evm.TU.Sc2ySwM_228.1472 Anthoceros agrestis HOM05D004804 ORTHO05D005882 5.1e-17 93.2 57 70.2
unitig_27.g24899 Utricularia gibba HOM05D002116 ORTHO05D005882 6.7e-17 92.8 57 70.2
Medtr7g072350 Medicago truncatula HOM05D004804 ORTHO05D005882 8.8e-17 92.4 57 70.2
SMO118G0282 Selaginella moellendorffii HOM05D004804 ORTHO05D005882 3.3e-16 90.5 57 68.4
Mapoly0001s0200 Marchantia polymorpha HOM05D004804 ORTHO05D005882 4.3e-16 90.1 57 68.4
SEGI_18757 Sequoiadendron giganteum HOM05D004804 ORTHO05D005882 5.7e-16 89.7 75 57.3
Cre05.g237400 Chlamydomonas reinhardtii HOM05D004804 ORTHO05D005882 6.3e-15 86.3 57 66.7
Atru.chr5.1469 Acer truncatum HOM05D000003 ORTHO05D000004 2.0e-13 81.3 66 60.6
SMO116G0240 Selaginella moellendorffii HOM05D004804 ORTHO05D005882 1.3e-12 78.6 56 55.4
FAN13G1509 Fragaria x ananassa HOM05D004804 ORTHO05D022561 1.4e-11 75.1 65 55.4
Pp3c10_3520 Physcomitrium patens HOM05D004804 ORTHO05D005882 2.1e-10 71.2 66 51.5
MCO16G320 Micromonas commoda HOM05D004804 ORTHO05D005882 4.7e-10 70.1 60 56.7
PRCOL_00004448 Prasinoderma coloniale HOM05D004804 ORTHO05D005882 1.0e-09 68.9 59 52.5
Atru.chr13.236 Acer truncatum HOM05D000003 ORTHO05D000167 1.8e-09 68.2 69 49.3
BcaC05g25676 Brassica carinata HOM05D004804 ORTHO05D005882 5.1e-09 66.6 57 59.6
AUR62038459 Chenopodium quinoa HOM05D004804 ORTHO05D005882 1.8e-06 58.2 31 80.6
BcaC01g02299 Brassica carinata HOM05D004804 ORTHO05D005882 9.1e-06 55.8 38 68.4
C03p66880 Brassica napus HOM05D004804 ORTHO05D005882 9.1e-06 55.8 36 69.4


User provided reference genes

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