Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr5.1330 Acer truncatum HOM05D007078 ORTHO05D008745 1.7e-117 426.0 216 100.0
Dinv11266 Davidia involucrata HOM05D007078 ORTHO05D008745 2.9e-85 318.9 233 73.4
Ciclev10022169m.g Citrus clementina HOM05D007078 ORTHO05D008745 8.5e-85 317.4 220 77.3
Gorai.004G084200 Gossypium raimondii HOM05D007078 ORTHO05D008745 4.1e-79 298.5 227 72.2
MD03G1271700 Malus domestica HOM05D007078 ORTHO05D008745 4.1e-79 298.5 226 70.4
GSVIVG01011060001 Vitis vinifera HOM05D007078 ORTHO05D008745 5.4e-79 298.1 217 71.4
Prupe.8G247900 Prunus persica HOM05D007078 ORTHO05D008745 9.2e-79 297.4 218 72.9
QL12p022959 Quercus lobata HOM05D007078 ORTHO05D008745 1.2e-78 297.0 218 70.6
RcHm_v2.0_Chr6g0291981 Rosa chinensis HOM05D007078 ORTHO05D008745 1.2e-78 297.0 223 71.3
TAR362G1057 Trochodendron aralioides HOM05D007078 ORTHO05D008745 1.2e-78 297.0 221 70.1
Gohir.D08G078400 Gossypium hirsutum HOM05D007078 ORTHO05D008745 2.7e-78 295.8 227 71.8
Lsat_1_v5_gn_9_1840 Lactuca sativa HOM05D007078 ORTHO05D008745 4.5e-78 295.0 226 68.1
HanXRQChr15g0466581 Helianthus annuus HOM05D007078 ORTHO05D008745 5.9e-78 294.7 220 71.4
MD11G1292300 Malus domestica HOM05D007078 ORTHO05D008745 1.9e-76 289.7 216 70.4
Hma1.2p1_0628F.1_g191760 Hydrangea macrophylla HOM05D007078 ORTHO05D008745 2.5e-76 289.3 220 70.0
Manes.05G071800 Manihot esculenta HOM05D007078 ORTHO05D008745 4.3e-76 288.5 221 69.7
Eucgr.K03409 Eucalyptus grandis HOM05D007078 ORTHO05D008745 2.1e-75 286.2 226 68.6
Cfa006079 Carpinus fangiana HOM05D007078 ORTHO05D008745 2.8e-75 285.8 220 68.6
Nn3g21178 Nelumbo nucifera HOM05D007078 ORTHO05D008745 8.0e-75 284.3 222 65.8
CSS0036917 Camellia sinensis var. sinensis HOM05D007078 ORTHO05D008745 1.0e-74 283.9 236 66.5
CANSAT25G2561 Cannabis sativa HOM05D007078 ORTHO05D008745 1.4e-74 283.5 225 68.4
TWI59G1055 Tripterygium wilfordii HOM05D007078 ORTHO05D008745 1.8e-74 283.1 220 67.7
FAN27G0292 Fragaria x ananassa HOM05D007078 ORTHO05D008745 2.3e-74 282.7 221 67.9
CSS0044942 Camellia sinensis var. sinensis HOM05D007078 ORTHO05D008745 3.0e-74 282.3 236 66.1
Potri.014G137300 Populus trichocarpa HOM05D007078 ORTHO05D008745 3.0e-74 282.3 230 67.4
CiPaw.07G095800 Carya illinoinensis HOM05D007078 ORTHO05D008745 4.0e-74 282.0 219 65.8
CsaV3_7G028490 Cucumis sativus L. HOM05D007078 ORTHO05D008745 5.2e-74 281.6 225 66.2
Lj1g0026447 Lotus japonicus HOM05D007078 ORTHO05D008745 6.8e-74 281.2 186 77.4
Duzib138G1888 Durio zibethinus HOM05D007078 ORTHO05D008745 1.2e-73 280.4 231 68.0
Sed0016724 Sechium edule HOM05D007078 ORTHO05D008745 1.2e-73 280.4 222 66.2
MELO3C015872.2 Cucumis melo HOM05D007078 ORTHO05D008745 1.5e-73 280.0 225 65.3
EL10Ac7g17029 Beta vulgaris HOM05D007078 ORTHO05D008745 2.0e-73 279.6 227 64.3
ECA247G1342 Erigeron canadensis HOM05D007078 ORTHO05D008745 2.0e-73 279.6 223 67.3
FvH4_2g24170 Fragaria vesca HOM05D007078 ORTHO05D008745 2.0e-73 279.6 222 67.1
Medtr7g094220 Medicago truncatula HOM05D007078 ORTHO05D008745 2.2e-72 276.2 224 68.8
Oeu047893.1 Olea europaea HOM05D007078 ORTHO05D008745 2.9e-72 275.8 215 67.9
Glyma.19G152600 Glycine max HOM05D007078 ORTHO05D008745 1.4e-71 273.5 181 76.8
Haze_04771 Corylus avellana HOM05D007078 ORTHO05D008745 1.8e-71 273.1 214 69.2
Migut.D00250 Erythranthe guttata HOM05D007078 ORTHO05D008745 2.4e-71 272.7 227 64.8
Cpa.g.sc9.128 Carica papaya HOM05D007078 ORTHO05D008745 3.2e-71 272.3 202 69.8
Ca_08555_v3 Cicer arietinum L. HOM05D007078 ORTHO05D008745 3.2e-71 272.3 221 66.1
arahy.Tifrunner.gnm1.ann1.ERKA9X Arachis hypogaea HOM05D007078 ORTHO05D008745 5.4e-71 271.6 190 75.8
TPR.G32805 Trifolium pratense HOM05D007078 ORTHO05D008745 9.2e-71 270.8 223 65.0
arahy.Tifrunner.gnm1.ann1.9GKU3H Arachis hypogaea HOM05D007078 ORTHO05D008745 1.2e-70 270.4 190 75.3
FAN15G0223 Fragaria x ananassa HOM05D007078 ORTHO05D008745 1.6e-70 270.0 241 62.2
PSO210G6132 Papaver somniferum HOM05D007078 ORTHO05D008745 1.6e-70 270.0 186 70.4
Cc09_g03260 Coffea canephora HOM05D007078 ORTHO05D008745 2.0e-70 269.6 160 83.8
DCAR_018382 Daucus carota HOM05D007078 ORTHO05D008745 2.0e-70 269.6 149 86.6
PSO832G3632 Papaver somniferum HOM05D007078 ORTHO05D008745 4.6e-70 268.5 228 62.3
Phvul.001G147500 Phaseolus vulgaris HOM05D007078 ORTHO05D008745 4.6e-70 268.5 205 66.8
VMungo1383G1152 Vigna mungo HOM05D007078 ORTHO05D008745 5.9e-70 268.1 189 72.0
CDE12G0236 Ceratophyllum demersum HOM05D007078 ORTHO05D008745 1.3e-69 266.9 220 63.6
Psat3g066400 Pisum sativum HOM05D007078 ORTHO05D008745 1.3e-69 266.9 227 64.8
THA.LOC104823061 Tarenaya hassleriana HOM05D007078 ORTHO05D008745 1.7e-69 266.5 227 63.9
Thecc.01G285900 Theobroma cacao HOM05D007078 ORTHO05D008745 3.0e-69 265.8 217 70.5
Aqoxy5G00564 Aquilegia oxysepala HOM05D007078 ORTHO05D008745 6.6e-69 264.6 228 62.7
ATR0626G125 Amborella trichopoda HOM05D007078 ORTHO05D008745 3.3e-68 262.3 149 82.6
Os05g0404400 Oryza sativa ssp. japonica HOM05D007078 ORTHO05D008745 3.3e-68 262.3 145 84.8
Rhsim13G0021200 Rhododendron simsii HOM05D005701 ORTHO05D007058 3.3e-68 262.3 223 64.1
Nitab4.5_0005757g0030 Nicotiana tabacum HOM05D007078 ORTHO05D008745 9.5e-68 260.8 227 64.8
PGR044G0767 Punica granatum HOM05D007078 ORTHO05D008745 1.6e-67 260.0 143 86.7
Nitab4.5_0001436g0040 Nicotiana tabacum HOM05D007078 ORTHO05D008745 1.8e-66 256.5 225 64.0
vmacro02537 Vaccinium macrocarpon HOM05D007078 ORTHO05D008745 1.8e-66 256.5 227 62.1
Sabra14G0103700 Salix brachista HOM05D007078 ORTHO05D008745 2.3e-66 256.1 166 77.1
Glyma.03G149600 Glycine max HOM05D007078 ORTHO05D008745 3.1e-66 255.8 174 75.3
PGSC0003DMG400023469 Solanum tuberosum HOM05D007078 ORTHO05D008745 3.1e-66 255.8 229 61.1
CARHR143460 Cardamine hirsuta HOM05D007078 ORTHO05D008745 5.2e-66 255.0 157 79.6
Solyc05g055850.3 Solanum lycopersicum HOM05D007078 ORTHO05D008745 6.8e-66 254.6 233 60.5
AL4G47660 Arabidopsis lyrata HOM05D007078 ORTHO05D008745 8.9e-66 254.2 158 79.7
FAN24G3201 Fragaria x ananassa HOM05D007078 ORTHO05D008745 8.9e-66 254.2 209 66.0
Lj1C43T3 Lonicera japonica HOM05D007078 ORTHO05D008745 1.2e-65 253.8 213 65.3
Sp4g29960 Schrenkiella parvula HOM05D007078 ORTHO05D008745 1.2e-65 253.8 197 69.5
unitig_0.g636 Utricularia gibba HOM05D007078 ORTHO05D008745 1.5e-65 253.4 172 75.0
Sopen05g034250 Solanum pennellii HOM05D007078 ORTHO05D008745 2.0e-65 253.1 230 60.9
Thhalv10001627m.g Eutrema salsugineum HOM05D007078 ORTHO05D008745 2.6e-65 252.7 181 71.8
AT2G48070 Arabidopsis thaliana HOM05D007078 ORTHO05D008745 9.8e-65 250.8 148 81.8
Carub.0004s3077 Capsella rubella HOM05D007078 ORTHO05D008745 1.3e-64 250.4 143 84.6
BcaC02g12558 Brassica carinata HOM05D007078 ORTHO05D008745 3.7e-64 248.8 158 77.8
BolSC55t61232H Brassica oleracea HOM05D007078 ORTHO05D008745 3.7e-64 248.8 158 77.8
Lalb_Chr01g0020251 Lupinus albus HOM05D007078 ORTHO05D008745 1.4e-63 246.9 217 61.8
A05p00060 Brassica napus HOM05D007078 ORTHO05D008745 1.9e-63 246.5 169 73.4
BraA05t19002Z Brassica rapa HOM05D007078 ORTHO05D008745 1.9e-63 246.5 169 73.4
BcaB02g08732 Brassica carinata HOM05D007078 ORTHO05D008745 5.4e-63 245.0 143 81.8
PGR142G0265 Punica granatum HOM05D007078 ORTHO05D008745 1.2e-62 243.8 150 78.7
AUR62006322 Chenopodium quinoa HOM05D007078 ORTHO05D008745 2.0e-62 243.0 137 85.4
AagrBONN_evm.TU.Sc2ySwM_117.1018 Anthoceros agrestis HOM05D007078 ORTHO05D008745 6.0e-62 241.5 211 60.7
Sc24g0004060 Simmondsia chinensis HOM05D007078 ORTHO05D008745 2.3e-61 239.6 216 60.2
Mapoly0037s0112 Marchantia polymorpha HOM05D007078 ORTHO05D008745 6.6e-61 238.0 178 66.9
Aa31LG1G29480 Aethionema arabicum HOM05D007078 ORTHO05D008745 3.3e-60 235.7 133 85.0
BNapus_Darmor_BZH_scaffold_188p00040 Brassica napus HOM05D007078 ORTHO05D008745 5.6e-60 235.0 150 78.0
Ah.08g209880 Amaranthus hybridus HOM05D007078 ORTHO05D008745 8.1e-59 231.1 214 60.3
AUR62026362 Chenopodium quinoa HOM05D007078 ORTHO05D008745 1.4e-58 230.3 129 86.0
SMO358G0655 Selaginella moellendorffii HOM05D007078 ORTHO05D008745 7.5e-57 224.6 160 66.9
Pp3c24_17730 Physcomitrium patens HOM05D007078 ORTHO05D008745 7.1e-55 218.0 157 66.2
CBR_g32237 Chara braunii HOM05D007078 ORTHO05D008745 2.6e-49 199.5 139 67.6
CDE01G0430 Ceratophyllum demersum HOM05D007078 ORTHO05D008745 2.5e-44 183.0 98 85.7
MBI19_g21637_MAGBIO Magnolia biondii HOM05D007078 ORTHO05D008745 7.3e-44 181.4 186 54.8
Gohir.A08G070800 Gossypium hirsutum HOM05D007078 ORTHO05D008745 8.1e-43 177.9 162 63.6
Oeu006229.1 Olea europaea HOM05D007078 ORTHO05D008745 6.9e-42 174.9 90 90.0
ClCG09G006760 Citrullus lanatus HOM05D007078 ORTHO05D008745 2.6e-41 172.9 217 47.9
MCO10G051 Micromonas commoda HOM05D007078 ORTHO05D008745 2.9e-40 169.5 130 61.5
Cre03.g145207 Chlamydomonas reinhardtii HOM05D007078 ORTHO05D008745 2.7e-38 162.9 152 53.3
Ca_08589_v3 Cicer arietinum L. HOM05D007078 ORTHO05D008745 3.9e-37 159.1 156 58.3
SGA_v2.0_scaffold11G05787 Striga asiatica HOM05D007078 ORTHO05D008745 3.3e-36 156.0 136 61.0
PRCOL_00000964 Prasinoderma coloniale HOM05D007078 ORTHO05D008745 2.6e-33 146.4 132 57.6
SEGI_07843 Sequoiadendron giganteum HOM05D007078 ORTHO05D008745 5.8e-33 145.2 150 54.0
Zm00001eb287740 Zea mays HOM05D007078 ORTHO05D008745 7.6e-33 144.8 104 72.1
Actinidia00723 Actinidia chinensis HOM05D007078 ORTHO05D008745 2.2e-32 143.3 75 88.0
HPP92_019174 Vanilla planifolia HOM05D007078 ORTHO05D008745 5.4e-31 138.7 99 68.7
Peaxi162Scf00156g00061 Petunia axillaris HOM05D007078 ORTHO05D008745 6.0e-30 135.2 83 83.1
PGR142G2005 Punica granatum HOM05D007078 ORTHO05D008745 4.3e-28 129.0 77 81.8
Actinidia24309 Actinidia chinensis HOM05D007078 ORTHO05D008745 1.4e-23 114.0 68 79.4
Hma1.2p1_0628F.1_g191770 Hydrangea macrophylla HOM05D007078 ORTHO05D008745 5.6e-20 102.1 56 85.7


User provided reference genes

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