Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr5.133 Acer truncatum HOM05D005798 ORTHO05D007269 1.2e-94 349.7 168 100.0
Atru.chr5.24 Acer truncatum HOM05D005798 ORTHO05D007269 4.8e-75 284.6 146 94.5
Atru.chr5.52 Acer truncatum HOM05D005798 ORTHO05D007269 2.4e-74 282.3 146 94.5
Ciclev10020482m.g Citrus clementina HOM05D005798 ORTHO05D007269 1.7e-51 206.5 145 70.3
Dinv43575 Davidia involucrata HOM05D005798 ORTHO05D007269 5.3e-50 201.4 145 66.9
Manes.05G060100 Manihot esculenta HOM05D005798 ORTHO05D007269 5.9e-49 198.0 154 66.2
Prupe.2G112300 Prunus persica HOM05D005798 ORTHO05D007269 1.3e-48 196.8 145 66.9
MD02G1227400 Malus domestica HOM05D005798 ORTHO05D007269 5.0e-48 194.9 145 64.8
Potri.001G346900 Populus trichocarpa HOM05D005798 ORTHO05D007269 2.5e-47 192.6 145 64.8
CiPaw.13G020800 Carya illinoinensis HOM05D005798 ORTHO05D007269 5.5e-47 191.4 140 66.4
FAN23G2651 Fragaria x ananassa HOM05D005798 ORTHO05D007269 7.2e-47 191.0 145 62.8
FvH4_1g25731 Fragaria vesca HOM05D005798 ORTHO05D007269 1.6e-46 189.9 145 62.8
FAN26G0835 Fragaria x ananassa HOM05D005798 ORTHO05D007269 1.6e-46 189.9 145 62.1
Sabra16G0226600 Salix brachista HOM05D005798 ORTHO05D007269 1.6e-46 189.9 145 64.8
FAN28G0191 Fragaria x ananassa HOM05D005798 ORTHO05D007269 2.1e-46 189.5 145 62.1
RcHm_v2.0_Chr1g0343251 Rosa chinensis HOM05D005798 ORTHO05D007269 2.1e-46 189.5 145 62.1
QL04p025438 Quercus lobata HOM05D005798 ORTHO05D007269 4.7e-46 188.3 140 66.4
Duzib128G1323 Durio zibethinus HOM05D005798 ORTHO05D007269 7.9e-46 187.6 163 58.9
MD07G1086000 Malus domestica HOM05D005798 ORTHO05D007269 1.0e-45 187.2 145 61.4
COL.COLO4_19318 Corchorus olitorius HOM05D005798 ORTHO05D007269 3.0e-45 185.7 140 66.4
Actinidia33294 Actinidia chinensis HOM05D005798 ORTHO05D007269 3.9e-45 185.3 139 64.0
TAR375G0847 Trochodendron aralioides HOM05D005798 ORTHO05D007269 3.9e-45 185.3 137 67.2
Rhsim01G0145000 Rhododendron simsii HOM05D005798 ORTHO05D007269 2.0e-44 183.0 146 63.7
Peaxi162Scf01124g00121 Petunia axillaris HOM05D005798 ORTHO05D007269 2.6e-44 182.6 149 60.4
Nn1g00612 Nelumbo nucifera HOM05D005798 ORTHO05D007269 3.3e-44 182.2 142 63.4
Cc02_g25760 Coffea canephora HOM05D005798 ORTHO05D007269 5.7e-44 181.4 145 60.0
CSS0042045 Camellia sinensis var. sinensis HOM05D005798 ORTHO05D007269 7.4e-44 181.0 139 66.2
Lj1g0019008 Lotus japonicus HOM05D005798 ORTHO05D007269 7.4e-44 181.0 145 62.8
Thecc.10G001400 Theobroma cacao HOM05D005798 ORTHO05D007269 1.3e-43 180.3 137 64.2
Nitab4.5_0013532g0010 Nicotiana tabacum HOM05D005798 ORTHO05D007269 2.8e-43 179.1 154 59.7
Nitab4.5_0009219g0010 Nicotiana tabacum HOM05D005798 ORTHO05D007269 4.8e-43 178.3 145 62.1
vmacro21093 Vaccinium macrocarpon HOM05D005798 ORTHO05D007269 6.3e-43 177.9 139 62.6
Nn2g10726 Nelumbo nucifera HOM05D005798 ORTHO05D007269 1.8e-42 176.4 142 62.0
PGR004G1878 Punica granatum HOM05D005798 ORTHO05D007269 2.4e-42 176.0 145 60.7
Oeu024375.1 Olea europaea HOM05D005798 ORTHO05D007269 7.0e-42 174.5 149 58.4
Oeu024376.1 Olea europaea HOM05D005798 ORTHO05D007269 7.0e-42 174.5 149 58.4
TWI59G0898 Tripterygium wilfordii HOM05D005798 ORTHO05D007269 7.0e-42 174.5 154 57.8
PGR004G0434 Punica granatum HOM05D005798 ORTHO05D007269 9.1e-42 174.1 145 60.0
Ca_03850_v3 Cicer arietinum L. HOM05D005798 ORTHO05D007269 1.6e-41 173.3 145 57.9
Lj7C553T5 Lonicera japonica HOM05D005798 ORTHO05D007269 2.0e-41 172.9 145 58.6
TPR.G30814 Trifolium pratense HOM05D005798 ORTHO05D007269 2.0e-41 172.9 146 61.0
Sed0012756 Sechium edule HOM05D005798 ORTHO05D007269 3.5e-41 172.2 145 55.9
Solyc01g088390.3 Solanum lycopersicum HOM05D005798 ORTHO05D007269 3.5e-41 172.2 180 52.8
CAN.G1480.2 Capsicum annuum HOM05D005798 ORTHO05D007269 5.9e-41 171.4 176 53.4
PGSC0003DMG400001703 Solanum tuberosum HOM05D005798 ORTHO05D007269 1.7e-40 169.9 149 57.7
Medtr0103s0100 Medicago truncatula HOM05D005798 ORTHO05D007269 2.9e-40 169.1 147 57.8
MELO3C006251.2 Cucumis melo HOM05D005798 ORTHO05D007269 3.8e-40 168.7 145 55.2
Gohir.A10G242600 Gossypium hirsutum HOM05D005798 ORTHO05D007269 3.8e-40 168.7 163 54.0
THA.LOC104817171 Tarenaya hassleriana HOM05D005798 ORTHO05D007269 3.8e-40 168.7 148 58.1
Gorai.011G295600 Gossypium raimondii HOM05D005798 ORTHO05D007269 5.0e-40 168.3 163 54.0
Gohir.D10G254600 Gossypium hirsutum HOM05D005798 ORTHO05D007269 1.1e-39 167.2 163 53.4
arahy.Tifrunner.gnm1.ann1.1MA0KJ Arachis hypogaea HOM05D005798 ORTHO05D007269 3.2e-39 165.6 145 57.9
CANSAT21G0894 Cannabis sativa HOM05D005798 ORTHO05D007269 3.2e-39 165.6 140 59.3
arahy.Tifrunner.gnm1.ann1.6FN2NF Arachis hypogaea HOM05D005798 ORTHO05D007269 4.2e-39 165.2 145 57.9
Sopen01g035220 Solanum pennellii HOM05D005798 ORTHO05D007269 5.5e-39 164.9 145 57.9
ClCG05G002770 Citrullus lanatus HOM05D005798 ORTHO05D007269 9.4e-39 164.1 145 53.1
CsaV3_3G010280 Cucumis sativus L. HOM05D005798 ORTHO05D007269 9.4e-39 164.1 145 55.2
Lalb_Chr19g0126311 Lupinus albus HOM05D005798 ORTHO05D007269 9.4e-39 164.1 167 52.1
Eucgr.D01150 Eucalyptus grandis HOM05D005798 ORTHO05D007269 1.2e-38 163.7 145 55.9
Psat3g172680 Pisum sativum HOM05D005798 ORTHO05D007269 1.6e-38 163.3 177 50.3
VMungo1080G0989 Vigna mungo HOM05D005798 ORTHO05D007269 2.7e-38 162.5 145 57.2
ECA234G4178 Erigeron canadensis HOM05D005798 ORTHO05D007269 6.1e-38 161.4 146 55.5
PSO063G7295 Papaver somniferum HOM05D005798 ORTHO05D007269 1.8e-37 159.8 165 50.3
Migut.B01472 Erythranthe guttata HOM05D005798 ORTHO05D007269 3.0e-37 159.1 163 48.5
Thhalv10001723m.g Eutrema salsugineum HOM05D005798 ORTHO05D007269 5.2e-37 158.3 140 57.1
Glyma.04G128400 Glycine max HOM05D005798 ORTHO05D007269 6.7e-37 157.9 140 57.1
CARHR139800 Cardamine hirsuta HOM05D005798 ORTHO05D007269 8.8e-37 157.5 164 52.4
MSTRG.20650 Avicennia marina HOM05D005798 ORTHO05D007269 1.5e-36 156.8 135 56.3
Hund17139 Selenicereus undatus HOM05D005798 ORTHO05D007269 1.5e-36 156.8 145 52.4
Aa31LG1G26140 Aethionema arabicum HOM05D005798 ORTHO05D007269 2.0e-36 156.4 137 56.9
Phvul.005G016200 Phaseolus vulgaris HOM05D005798 ORTHO05D007269 2.0e-36 156.4 141 56.0
Glyma.06G310400 Glycine max HOM05D005798 ORTHO05D007269 3.3e-36 155.6 140 56.4
PSO017G1219 Papaver somniferum HOM05D005798 ORTHO05D007269 7.5e-36 154.5 147 52.4
PSO782G4885 Papaver somniferum HOM05D005798 ORTHO05D007269 7.5e-36 154.5 147 52.4
Sp4g26670 Schrenkiella parvula HOM05D005798 ORTHO05D007269 7.5e-36 154.5 166 49.4
HanXRQChr16g0519531 Helianthus annuus HOM05D005798 ORTHO05D007269 2.2e-35 152.9 139 54.7
AT2G44580 Arabidopsis thaliana HOM05D005798 ORTHO05D007269 3.7e-35 152.1 142 54.2
AL4G43620 Arabidopsis lyrata HOM05D005798 ORTHO05D007269 4.8e-35 151.8 141 54.6
BcaB02g08835 Brassica carinata HOM05D005798 ORTHO05D007269 1.1e-34 150.6 164 48.8
BolC4t22185H Brassica oleracea HOM05D005798 ORTHO05D007269 1.1e-34 150.6 164 49.4
Ah.14g086050 Amaranthus hybridus HOM05D005798 ORTHO05D007269 1.8e-34 149.8 145 51.7
Carub.0004s2713 Capsella rubella HOM05D005798 ORTHO05D007269 3.1e-34 149.1 170 49.4
Sc26g0001830 Simmondsia chinensis HOM05D005798 ORTHO05D007269 7.0e-34 147.9 145 47.6
MBI05_g22048_MAGBIO Magnolia biondii HOM05D005798 ORTHO05D007269 1.6e-33 146.7 139 54.0
BraA05t19450Z Brassica rapa HOM05D005798 ORTHO05D007269 2.0e-33 146.4 165 49.1
EL10Ac8g19272 Beta vulgaris HOM05D005798 ORTHO05D007269 5.9e-33 144.8 158 47.5
A05p04740 Brassica napus HOM05D005798 ORTHO05D007269 7.7e-33 144.4 165 47.9
AUR62027448 Chenopodium quinoa HOM05D005798 ORTHO05D007269 7.7e-33 144.4 158 47.5
BcaC02g12292 Brassica carinata HOM05D005798 ORTHO05D007269 2.2e-32 142.9 164 46.3
C04p05550 Brassica napus HOM05D005798 ORTHO05D007269 2.2e-32 142.9 164 46.3
AUR62031252 Chenopodium quinoa HOM05D005798 ORTHO05D007269 1.1e-31 140.6 158 46.2
SGA_v2.0_scaffold17G08178 Striga asiatica HOM05D005798 ORTHO05D007269 1.1e-31 140.6 136 50.0
HPP92_011679 Vanilla planifolia HOM05D005798 ORTHO05D007269 1.2e-30 137.1 173 43.4
unitig_52.g17377 Utricularia gibba HOM05D005798 ORTHO05D007269 1.6e-30 136.7 131 51.1
CDE06G2636 Ceratophyllum demersum HOM05D005798 ORTHO05D007269 2.1e-30 136.3 156 42.9
SEGI_02869 Sequoiadendron giganteum HOM05D005798 ORTHO05D007269 1.0e-29 134.0 145 48.3
Cpa.g.sc3387.1 Carica papaya HOM05D005798 ORTHO05D007269 1.4e-29 133.7 115 55.7
Os05g0119600 Oryza sativa ssp. japonica HOM05D005798 ORTHO05D007269 6.8e-29 131.3 152 45.4
Pp3c5_22720 Physcomitrium patens HOM05D005798 ORTHO05D007269 3.7e-27 125.6 171 39.8
Zm00001eb112030 Zea mays HOM05D005798 ORTHO05D007269 1.4e-26 123.6 174 39.7
AagrBONN_evm.TU.Sc2ySwM_344.2100 Anthoceros agrestis HOM05D005798 ORTHO05D007269 4.2e-23 112.1 170 35.9
Peaxi162Scf00417g00029 Petunia axillaris HOM05D005798 ORTHO05D007269 5.5e-23 111.7 109 51.4
ATR0585G014 Amborella trichopoda HOM05D005798 ORTHO05D007269 7.2e-23 111.3 143 42.7
HanXRQChr12g0366931 Helianthus annuus HOM05D005798 ORTHO05D007269 6.1e-22 108.2 137 43.8
Mapoly0001s0452 Marchantia polymorpha HOM05D005798 ORTHO05D007269 1.0e-21 107.5 181 36.5
Nn1g07358 Nelumbo nucifera HOM05D005798 ORTHO05D007269 2.3e-21 106.3 78 66.7
Nn3g19112 Nelumbo nucifera HOM05D005798 ORTHO05D007269 2.8e-19 99.4 115 47.8
Prupe.2G112400 Prunus persica HOM05D005798 ORTHO05D007269 6.3e-19 98.2 77 61.0
CBR_g39622 Chara braunii HOM05D000017 ORTHO05D000013 4.3e-15 85.5 91 41.8
Haze_02923 Corylus avellana HOM05D005798 ORTHO05D007269 9.5e-15 84.3 61 67.2
Cre16.g684155 Chlamydomonas reinhardtii HOM05D005798 ORTHO05D007269 2.8e-14 82.8 162 35.2
GSVIVG01018417001 Vitis vinifera HOM05D005798 ORTHO05D007269 4.7e-14 82.0 62 66.1
Lsat_1_v5_gn_4_46040 Lactuca sativa HOM05D005798 ORTHO05D007269 4.0e-13 79.0 62 59.7
HanXRQChr07g0198081 Helianthus annuus HOM05D005798 ORTHO05D007269 2.0e-12 76.6 131 36.6
MBI14_g08084_MAGBIO Magnolia biondii HOM05D005798 ORTHO05D007269 2.0e-12 76.6 84 46.4
PRCOL_00005399 Prasinoderma coloniale HOM05D005798 ORTHO05D007269 5.9e-09 65.1 144 31.9
EL10Ac6g13432 Beta vulgaris HOM05D005798 ORTHO05D007269 5.6e-07 58.5 75 40.0


User provided reference genes

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