Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr5.1162 Acer truncatum HOM05D006871 ORTHO05D008544 2.1e-103 379.0 189 100.0
Ciclev10022428m.g Citrus clementina HOM05D006871 ORTHO05D008544 2.0e-85 319.3 189 82.5
Dinv33046 Davidia involucrata HOM05D006871 ORTHO05D008544 2.0e-82 309.3 192 80.2
Gohir.A08G101400 Gossypium hirsutum HOM05D006871 ORTHO05D008544 3.3e-80 302.0 194 77.8
Gohir.D08G084900 Gossypium hirsutum HOM05D006871 ORTHO05D008544 3.3e-80 302.0 192 78.1
CSS0020652 Camellia sinensis var. sinensis HOM05D006871 ORTHO05D008544 1.2e-79 300.1 188 76.6
CSS0035923 Camellia sinensis var. sinensis HOM05D006871 ORTHO05D008544 3.6e-79 298.5 188 76.1
Duzib138G1907 Durio zibethinus HOM05D006871 ORTHO05D008544 3.6e-79 298.5 194 77.8
Duzib133G1442 Durio zibethinus HOM05D006871 ORTHO05D008544 8.0e-79 297.4 194 77.3
Cfa005931 Carpinus fangiana HOM05D006871 ORTHO05D008544 1.2e-77 293.5 196 74.0
Hma1.2p1_0491F.1_g164460 Hydrangea macrophylla HOM05D006871 ORTHO05D008544 1.5e-77 293.1 189 76.7
Haze_04913 Corylus avellana HOM05D006871 ORTHO05D008544 5.7e-77 291.2 198 72.7
COL.COLO4_23360 Corchorus olitorius HOM05D006871 ORTHO05D008544 7.5e-77 290.8 185 77.8
Lsat_1_v5_gn_8_53460 Lactuca sativa HOM05D006871 ORTHO05D008544 7.5e-77 290.8 188 74.5
MSTRG.18162 Avicennia marina HOM05D006871 ORTHO05D008544 1.3e-76 290.0 189 73.5
Thecc.01G298700 Theobroma cacao HOM05D006871 ORTHO05D008544 1.3e-76 290.0 194 75.8
TWI14G0013 Tripterygium wilfordii HOM05D006871 ORTHO05D008544 2.8e-76 288.9 190 75.8
TAR633G1007 Trochodendron aralioides HOM05D006871 ORTHO05D008544 4.9e-76 288.1 195 73.8
SalBow3G3208 Salvia bowleyana HOM05D006871 ORTHO05D008544 1.1e-75 287.0 188 71.8
Gorai.004G089300 Gossypium raimondii HOM05D006871 ORTHO05D008544 4.1e-75 285.0 225 66.7
CiPaw.07G107300 Carya illinoinensis HOM05D006871 ORTHO05D008544 5.4e-75 284.6 192 73.4
Potri.014G130400 Populus trichocarpa HOM05D006871 ORTHO05D008544 7.0e-75 284.3 192 74.0
vmacro02459 Vaccinium macrocarpon HOM05D006871 ORTHO05D008544 9.2e-75 283.9 190 73.2
Oeu032105.1 Olea europaea HOM05D006871 ORTHO05D008544 1.2e-74 283.5 189 71.4
Prupe.8G259900 Prunus persica HOM05D006871 ORTHO05D008544 1.6e-74 283.1 190 74.7
Manes.05G063100 Manihot esculenta HOM05D006871 ORTHO05D008544 2.7e-74 282.3 190 74.2
Migut.D00207 Erythranthe guttata HOM05D006871 ORTHO05D008544 1.3e-73 280.0 188 71.3
Cpa.g.sc9.224 Carica papaya HOM05D000121 ORTHO05D000102 2.3e-73 279.3 198 70.7
SGA_v2.0_scaffold1G00373 Striga asiatica HOM05D001198 ORTHO05D008544 2.9e-73 278.9 186 70.4
Rhsim13G0011300 Rhododendron simsii HOM05D000121 ORTHO05D000102 3.8e-73 278.5 187 73.3
MELO3C016009.2 Cucumis melo HOM05D006871 ORTHO05D008544 6.6e-73 277.7 191 71.7
PGR119G1195 Punica granatum HOM05D006871 ORTHO05D008544 6.6e-73 277.7 199 69.8
PGR119G1688 Punica granatum HOM05D006871 ORTHO05D008544 6.6e-73 277.7 199 69.8
Aqoxy5G00741 Aquilegia oxysepala HOM05D006871 ORTHO05D008544 1.1e-72 276.9 187 72.2
HanXRQChr06g0163831 Helianthus annuus HOM05D006871 ORTHO05D008544 1.1e-72 276.9 189 73.5
MD11G1313700 Malus domestica HOM05D006871 ORTHO05D008544 1.1e-72 276.9 195 72.3
CANSAT25G1157 Cannabis sativa HOM05D006871 ORTHO05D008544 5.6e-72 274.6 195 71.3
CANSAT25G3267 Cannabis sativa HOM05D006871 ORTHO05D008544 5.6e-72 274.6 195 71.3
Lj2A1192T47 Lonicera japonica HOM05D006871 ORTHO05D008544 5.6e-72 274.6 191 70.7
Nitab4.5_0011307g0010 Nicotiana tabacum HOM05D006871 ORTHO05D008544 5.6e-72 274.6 192 69.3
Sc05g0003970 Simmondsia chinensis HOM05D006871 ORTHO05D008544 5.6e-72 274.6 190 71.1
THA.LOC104815930 Tarenaya hassleriana HOM05D006871 ORTHO05D008544 7.3e-72 274.2 195 70.8
Thhalv10008837m.g Eutrema salsugineum HOM05D006871 ORTHO05D008544 1.2e-71 273.5 195 67.7
Sabra14G0097000 Salix brachista HOM05D006871 ORTHO05D008544 1.2e-71 273.5 192 70.8
BcaC05g24587 Brassica carinata HOM05D006871 ORTHO05D008544 1.6e-71 273.1 192 67.2
C05p01490 Brassica napus HOM05D006871 ORTHO05D008544 1.6e-71 273.1 192 67.2
A10p01520 Brassica napus HOM05D006871 ORTHO05D008544 3.6e-71 271.9 192 67.2
CsaV3_7G029180 Cucumis sativus L. HOM05D006871 ORTHO05D008544 3.6e-71 271.9 191 70.2
BolC5t28931H Brassica oleracea HOM05D006871 ORTHO05D008544 4.7e-71 271.6 192 66.7
BraA10t42428Z Brassica rapa HOM05D006871 ORTHO05D008544 4.7e-71 271.6 192 66.7
Sed0022553 Sechium edule HOM05D006871 ORTHO05D008544 8.0e-71 270.8 193 69.9
Actinidia24342 Actinidia chinensis HOM05D006871 ORTHO05D008544 1.0e-70 270.4 189 70.9
THA.LOC104801274 Tarenaya hassleriana HOM05D006871 ORTHO05D008544 1.0e-70 270.4 193 69.9
GSVIVG01027991001 Vitis vinifera HOM05D006871 ORTHO05D008544 1.0e-70 270.4 198 66.2
Nitab4.5_0002469g0070 Nicotiana tabacum HOM05D006871 ORTHO05D008544 1.8e-70 269.6 195 68.7
RcHm_v2.0_Chr6g0293791 Rosa chinensis HOM05D006871 ORTHO05D008544 8.9e-70 267.3 192 70.3
BcaB03g15758 Brassica carinata HOM05D006871 ORTHO05D008544 1.2e-69 266.9 196 65.8
AT1G02870 Arabidopsis thaliana HOM05D006871 ORTHO05D008544 1.5e-69 266.5 193 65.3
CARHR002210 Cardamine hirsuta HOM05D006871 ORTHO05D008544 1.5e-69 266.5 192 67.2
Sp1g01860 Schrenkiella parvula HOM05D006871 ORTHO05D008544 1.5e-69 266.5 192 66.1
Actinidia32224 Actinidia chinensis HOM05D006871 ORTHO05D008544 2.0e-69 266.2 190 68.4
PGSC0003DMG400011375 Solanum tuberosum HOM05D006871 ORTHO05D008544 2.0e-69 266.2 198 69.2
Cc09_g05510 Coffea canephora HOM05D006871 ORTHO05D008544 2.6e-69 265.8 186 69.9
EL10Ac7g17459 Beta vulgaris HOM05D006871 ORTHO05D008544 4.4e-69 265.0 194 68.0
Solyc09g075030.3 Solanum lycopersicum HOM05D006871 ORTHO05D008544 7.5e-69 264.2 199 68.8
ClCG09G005940 Citrullus lanatus HOM05D006871 ORTHO05D008544 9.8e-69 263.8 193 69.9
AL1G12280 Arabidopsis lyrata HOM05D006871 ORTHO05D008544 1.7e-68 263.1 192 65.1
Lalb_Chr18g0047051 Lupinus albus HOM05D006871 ORTHO05D008544 2.9e-68 262.3 192 69.3
unitig_0.g659 Utricularia gibba HOM05D006871 ORTHO05D008544 4.9e-68 261.5 189 68.3
Eucgr.H01153 Eucalyptus grandis HOM05D006871 ORTHO05D008544 6.4e-68 261.2 204 67.6
Peaxi162Scf00001g00482 Petunia axillaris HOM05D006871 ORTHO05D008544 6.4e-68 261.2 191 68.6
Aa31LG1G9720 Aethionema arabicum HOM05D006871 ORTHO05D008544 4.1e-67 258.5 195 64.1
PSO210G5360 Papaver somniferum HOM05D006871 ORTHO05D008544 5.4e-67 258.1 191 68.1
PSO832G2873 Papaver somniferum HOM05D006871 ORTHO05D008544 5.4e-67 258.1 191 68.1
Sopen09g029850 Solanum pennellii HOM05D006871 ORTHO05D008544 5.4e-67 258.1 199 67.3
arahy.Tifrunner.gnm1.ann1.KXN2DA Arachis hypogaea HOM05D006871 ORTHO05D008544 1.0e-65 253.8 188 69.1
CiPaw.08G096300 Carya illinoinensis HOM05D006871 ORTHO05D008544 1.3e-65 253.4 192 65.1
AUR62033118 Chenopodium quinoa HOM05D006871 ORTHO05D008544 1.3e-65 253.4 192 67.2
arahy.Tifrunner.gnm1.ann1.K3SJ5I Arachis hypogaea HOM05D006871 ORTHO05D008544 1.7e-65 253.1 190 68.4
QL12p027406 Quercus lobata HOM05D006871 ORTHO05D008544 2.3e-65 252.7 182 70.9
Carub.0001s0199 Capsella rubella HOM05D006871 ORTHO05D008544 3.0e-65 252.3 192 64.1
C08p00260 Brassica napus HOM05D006871 ORTHO05D008544 8.6e-65 250.8 194 63.9
Hund18131 Selenicereus undatus HOM05D006871 ORTHO05D008544 8.6e-65 250.8 232 57.8
BolC8t46828H Brassica oleracea HOM05D006871 ORTHO05D008544 1.9e-64 249.6 194 63.4
ECA236G5112 Erigeron canadensis HOM05D006871 ORTHO05D008544 3.3e-64 248.8 188 67.0
CAN.G339.16 Capsicum annuum HOM05D006871 ORTHO05D008544 4.3e-64 248.4 186 69.4
FvH4_2g25580 Fragaria vesca HOM05D006871 ORTHO05D008544 5.6e-64 248.1 192 65.6
FAN20G2591 Fragaria x ananassa HOM05D006871 ORTHO05D008544 2.1e-63 246.1 192 65.6
FAN27G2794 Fragaria x ananassa HOM05D006871 ORTHO05D008544 3.6e-63 245.4 192 65.6
CDE05G0468 Ceratophyllum demersum HOM05D006871 ORTHO05D008544 1.8e-62 243.0 186 65.6
ATR0796G034 Amborella trichopoda HOM05D006871 ORTHO05D008544 4.1e-59 231.9 188 61.2
Nn3g21461 Nelumbo nucifera HOM05D006871 ORTHO05D008544 1.0e-57 227.3 152 75.7
VMungo0720G2524 Vigna mungo HOM05D006871 ORTHO05D008544 1.1e-56 223.8 189 61.9
FAN24G1547 Fragaria x ananassa HOM05D006871 ORTHO05D008544 4.3e-56 221.9 185 62.2
Phvul.007G143800 Phaseolus vulgaris HOM05D006871 ORTHO05D008544 4.3e-56 221.9 190 62.6
HPP92_013720 Vanilla planifolia HOM05D006871 ORTHO05D008544 7.3e-56 221.1 183 61.7
Glyma.10G018900 Glycine max HOM05D006871 ORTHO05D008544 1.2e-55 220.3 185 60.5
Glyma.02G155400 Glycine max HOM05D006871 ORTHO05D008544 2.1e-55 219.5 185 60.0
AUR62008650 Chenopodium quinoa HOM05D006871 ORTHO05D008544 3.6e-55 218.8 275 46.5
Zm00001eb285510 Zea mays HOM05D006871 ORTHO05D008544 4.7e-55 218.4 180 62.2
Medtr1g088670 Medicago truncatula HOM05D006871 ORTHO05D008544 6.8e-54 214.5 189 59.8
Lj1g0003126 Lotus japonicus HOM05D006871 ORTHO05D008544 8.9e-54 214.2 192 59.4
Os05g0367100 Oryza sativa ssp. japonica HOM05D006871 ORTHO05D008544 2.9e-52 209.1 185 56.8
Ca_10345_v3 Cicer arietinum L. HOM05D006871 ORTHO05D008544 3.7e-52 208.8 187 57.8
Psat6g165000 Pisum sativum HOM05D006871 ORTHO05D008544 3.2e-51 205.7 186 58.1
BcaC07g36990 Brassica carinata HOM05D006871 ORTHO05D008544 7.3e-48 194.5 154 59.1
AagrBONN_evm.TU.Sc2ySwM_117.3922 Anthoceros agrestis HOM05D006871 ORTHO05D008544 1.7e-36 156.8 176 49.4
MBI19_g13201_MAGBIO Magnolia biondii HOM05D006871 ORTHO05D008544 7.1e-35 151.4 113 69.0
Pp3c25_320 Physcomitrium patens HOM05D006871 ORTHO05D008544 4.6e-34 148.7 177 51.4
DCAR_002824 Daucus carota HOM05D006871 ORTHO05D008544 1.4e-30 137.1 111 64.9
CDE11G0846 Ceratophyllum demersum HOM05D006871 ORTHO05D008544 3.8e-28 129.0 110 62.7
Mapoly0043s0113 Marchantia polymorpha HOM05D006871 ORTHO05D008544 2.1e-26 123.2 176 44.3
Psat1g156280 Pisum sativum HOM05D006871 ORTHO05D008544 1.7e-20 103.6 115 52.2
MD05G1198200 Malus domestica HOM05D006871 ORTHO05D008544 1.0e-17 94.4 55 76.4
Cre17.g726650 Chlamydomonas reinhardtii HOM05D006871 ORTHO05D008544 2.2e-12 76.6 186 33.3
CBR_g19096 Chara braunii HOM05D006871 ORTHO05D008544 3.8e-12 75.9 77 50.6
Nitab4.5_0000119g0320 Nicotiana tabacum HOM05D006871 ORTHO05D008544 6.5e-12 75.1 49 67.3
RcHm_v2.0_Chr2g0134071 Rosa chinensis HOM05D006871 ORTHO05D008544 3.5e-10 69.3 59 64.4
MD03G1286500 Malus domestica HOM05D006871 ORTHO05D008544 7.9e-10 68.2 36 83.3
MCO15G582 Micromonas commoda HOM05D006871 ORTHO05D008544 9.7e-08 61.2 189 28.6


User provided reference genes

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