Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr4.846 Acer truncatum HOM05D007448 ORTHO05D009392 9.4e-34 146.4 78 100.0
Cpa.g.sc80.111 Carica papaya HOM05D007448 ORTHO05D009392 1.2e-23 112.8 78 70.5
Hma1.2p1_1003F.1_g246780 Hydrangea macrophylla HOM05D007448 ORTHO05D009392 4.9e-22 107.5 72 75.0
Hma1.2p1_1488F.1_g286625 Hydrangea macrophylla HOM05D007448 ORTHO05D009392 4.9e-22 107.5 72 75.0
Nn1g03921 Nelumbo nucifera HOM05D007448 ORTHO05D009392 3.1e-21 104.8 77 67.5
Thecc.07G071800 Theobroma cacao HOM05D007448 ORTHO05D009392 3.1e-21 104.8 78 69.2
CiPaw.11G176100 Carya illinoinensis HOM05D007448 ORTHO05D009392 5.4e-21 104.0 78 69.2
Gohir.A13G143800 Gossypium hirsutum HOM05D007448 ORTHO05D009392 1.2e-20 102.8 78 66.7
Prupe.4G189600 Prunus persica HOM05D007448 ORTHO05D009392 2.0e-20 102.1 78 65.4
Sed0026843 Sechium edule HOM05D007448 ORTHO05D009392 2.0e-20 102.1 78 66.7
Duzib213G0053 Durio zibethinus HOM05D007448 ORTHO05D009392 2.7e-20 101.7 78 69.2
Gohir.D13G148600 Gossypium hirsutum HOM05D007448 ORTHO05D009392 3.5e-20 101.3 78 65.4
GSVIVG01014426001 Vitis vinifera HOM05D007448 ORTHO05D009392 4.5e-20 100.9 78 65.4
Eucgr.F01082 Eucalyptus grandis HOM05D007448 ORTHO05D009392 7.7e-20 100.1 78 62.8
Manes.03G111700 Manihot esculenta HOM05D007448 ORTHO05D009392 7.7e-20 100.1 78 65.4
FvH4_3g20900 Fragaria vesca HOM05D007448 ORTHO05D009392 1.0e-19 99.8 77 66.2
Gorai.013G166400 Gossypium raimondii HOM05D007448 ORTHO05D009392 1.0e-19 99.8 78 64.1
TWI39G0054 Tripterygium wilfordii HOM05D007448 ORTHO05D009392 1.3e-19 99.4 78 65.4
Sabra16G0269700 Salix brachista HOM05D007448 ORTHO05D009392 1.7e-19 99.0 76 68.4
Ciclev10010083m.g Citrus clementina HOM05D007448 ORTHO05D009392 2.3e-19 98.6 78 66.7
Cfa020508 Carpinus fangiana HOM05D007448 ORTHO05D009392 2.9e-19 98.2 77 64.9
FAN25G3793 Fragaria x ananassa HOM05D007448 ORTHO05D009392 2.9e-19 98.2 77 64.9
HanXRQChr08g0234641 Helianthus annuus HOM05D007448 ORTHO05D009392 2.9e-19 98.2 78 64.1
MD03G1219500 Malus domestica HOM05D007448 ORTHO05D009392 2.9e-19 98.2 78 64.1
Sc03g0009610 Simmondsia chinensis HOM05D007448 ORTHO05D009392 2.9e-19 98.2 77 63.6
FAN21G3287 Fragaria x ananassa HOM05D007448 ORTHO05D009392 3.8e-19 97.8 77 64.9
PGR083G2019 Punica granatum HOM05D007448 ORTHO05D009392 3.8e-19 97.8 78 66.7
Lsat_1_v5_gn_5_6900 Lactuca sativa HOM05D007448 ORTHO05D009392 6.6e-19 97.1 78 64.1
RcHm_v2.0_Chr5g0035321 Rosa chinensis HOM05D007448 ORTHO05D009392 8.6e-19 96.7 77 62.3
Ciclev10010683m.g Citrus clementina HOM05D007448 ORTHO05D009392 1.1e-18 96.3 78 65.4
AUR62015605 Chenopodium quinoa HOM05D007448 ORTHO05D009392 1.5e-18 95.9 69 68.1
ClCG11G018440 Citrullus lanatus HOM05D007448 ORTHO05D009392 1.5e-18 95.9 78 61.5
CsaV3_3G044380 Cucumis sativus L. HOM05D007448 ORTHO05D009392 1.9e-18 95.5 78 61.5
DCAR_021403 Daucus carota HOM05D007448 ORTHO05D009392 3.3e-18 94.7 66 68.2
Oeu019361.1 Olea europaea HOM05D007448 ORTHO05D009392 1.2e-17 92.8 63 74.6
arahy.Tifrunner.gnm1.ann1.UX5IA9 Arachis hypogaea HOM05D007448 ORTHO05D009392 1.6e-17 92.4 71 67.6
Potri.001G406200 Populus trichocarpa HOM05D007448 ORTHO05D009392 1.6e-17 92.4 79 62.0
Nitab4.5_0000639g0040 Nicotiana tabacum HOM05D007448 ORTHO05D009392 2.8e-17 91.7 76 63.2
Gorai.007G085800 Gossypium raimondii HOM05D007448 ORTHO05D009392 4.7e-17 90.9 78 59.0
arahy.Tifrunner.gnm1.ann1.GZ4R1Y Arachis hypogaea HOM05D007448 ORTHO05D009392 6.1e-17 90.5 71 64.8
Lj3g0013278 Lotus japonicus HOM05D007448 ORTHO05D009392 8.0e-17 90.1 65 70.8
Cc06_g05250 Coffea canephora HOM05D007448 ORTHO05D009392 1.0e-16 89.7 69 65.2
Migut.M00875 Erythranthe guttata HOM05D007448 ORTHO05D009392 1.0e-16 89.7 66 69.7
Phvul.011G154800 Phaseolus vulgaris HOM05D007448 ORTHO05D009392 1.4e-16 89.4 65 69.2
Glyma.06G253900 Glycine max HOM05D007448 ORTHO05D009392 3.0e-16 88.2 65 66.2
Nitab4.5_0008360g0010 Nicotiana tabacum HOM05D007448 ORTHO05D009392 3.0e-16 88.2 76 61.8
Peaxi162Scf00000g00504 Petunia axillaris HOM05D007448 ORTHO05D009392 4.0e-16 87.8 77 58.4
Rhsim04G0017500 Rhododendron simsii HOM05D007448 ORTHO05D009392 5.2e-16 87.4 59 72.9
Sopen12g006840 Solanum pennellii HOM05D007448 ORTHO05D009392 8.9e-16 86.7 77 58.4
PGSC0003DMG400008573 Solanum tuberosum HOM05D007448 ORTHO05D009392 8.9e-16 86.7 77 58.4
vmacro09556 Vaccinium macrocarpon HOM05D007448 ORTHO05D009392 8.9e-16 86.7 59 72.9
CDE02G3786 Ceratophyllum demersum HOM05D007448 ORTHO05D009392 1.2e-15 86.3 66 63.6
Solyc12g013500.2 Solanum lycopersicum HOM05D007448 ORTHO05D009392 1.2e-15 86.3 77 58.4
MELO3C018199.2 Cucumis melo HOM05D003028 ORTHO05D003465 2.0e-15 85.5 61 70.5
Medtr7g057740 Medicago truncatula HOM05D007448 ORTHO05D009392 2.6e-15 85.1 73 58.9
TPR.G23252 Trifolium pratense HOM05D007448 ORTHO05D009392 3.4e-15 84.7 65 67.7
Psat3g145520 Pisum sativum HOM05D007448 ORTHO05D009392 4.4e-15 84.3 65 67.7
QL08p018291 Quercus lobata HOM05D007448 ORTHO05D009392 4.4e-15 84.3 68 63.2
Thhalv10021866m.g Eutrema salsugineum HOM05D007448 ORTHO05D009392 5.7e-15 84.0 76 52.6
Gohir.A11G075500 Gossypium hirsutum HOM05D007448 ORTHO05D009392 5.7e-15 84.0 65 69.2
THA.LOC104822630 Tarenaya hassleriana HOM05D007448 ORTHO05D009392 5.7e-15 84.0 76 53.9
Sp3g23710 Schrenkiella parvula HOM05D007448 ORTHO05D009392 7.5e-15 83.6 76 52.6
Actinidia18748 Actinidia chinensis HOM05D007448 ORTHO05D009392 1.3e-14 82.8 55 72.7
ECA246G0067 Erigeron canadensis HOM05D007448 ORTHO05D009392 1.3e-14 82.8 67 65.7
unitig_899.g15312 Utricularia gibba HOM05D007448 ORTHO05D009392 1.3e-14 82.8 74 56.8
BcaC06g35910 Brassica carinata HOM05D007448 ORTHO05D009392 3.7e-14 81.3 76 50.0
BolC7t41418H Brassica oleracea HOM05D007448 ORTHO05D009392 3.7e-14 81.3 76 50.0
PSO421G0428 Papaver somniferum HOM05D007448 ORTHO05D009392 3.7e-14 81.3 58 69.0
CANSAT11G1525 Cannabis sativa HOM05D007448 ORTHO05D009392 4.9e-14 80.9 78 56.4
A07p06520 Brassica napus HOM05D007448 ORTHO05D009392 6.3e-14 80.5 76 51.3
BraA07t28447Z Brassica rapa HOM05D007448 ORTHO05D009392 6.3e-14 80.5 76 51.3
CSS0027029 Camellia sinensis var. sinensis HOM05D007448 ORTHO05D009392 1.1e-13 79.7 55 70.9
CDE05G1526 Ceratophyllum demersum HOM05D007448 ORTHO05D009392 1.4e-13 79.3 77 55.8
AL3G25660 Arabidopsis lyrata HOM05D007448 ORTHO05D009392 1.8e-13 79.0 76 50.0
BcaB06g26831 Brassica carinata HOM05D007448 ORTHO05D009392 1.8e-13 79.0 76 48.7
AT3G13677 Arabidopsis thaliana HOM05D007448 ORTHO05D009392 4.1e-13 77.8 76 50.0
Carub.0003s1319 Capsella rubella HOM05D007448 ORTHO05D009392 5.4e-13 77.4 76 48.7
Aqoxy4G01379 Aquilegia oxysepala HOM05D007448 ORTHO05D009392 1.2e-12 76.3 68 60.3
EL10Ac4g09050 Beta vulgaris HOM05D007448 ORTHO05D009392 1.2e-12 76.3 57 66.7
Os03g0581650 Oryza sativa ssp. japonica HOM05D007448 ORTHO05D009392 1.2e-12 76.3 59 64.4
Aa31LG8G850 Aethionema arabicum HOM05D007448 ORTHO05D009392 1.6e-12 75.9 76 50.0
Zm00001eb049080 Zea mays HOM05D007448 ORTHO05D009392 5.9e-12 73.9 59 61.0
TAR626G0388 Trochodendron aralioides HOM05D007448 ORTHO05D009392 1.7e-11 72.4 58 56.9
FAN11G2341 Fragaria x ananassa HOM05D007448 ORTHO05D009392 2.9e-11 71.6 58 62.1
Oeu006763.2 Olea europaea HOM05D007448 ORTHO05D009392 3.9e-11 71.2 57 59.6
Ah.06g183620 Amaranthus hybridus HOM05D007448 ORTHO05D009392 5.0e-11 70.9 58 60.3
AUR62035371 Chenopodium quinoa HOM05D007448 ORTHO05D009392 6.6e-11 70.5 59 55.9
AUR62035373 Chenopodium quinoa HOM05D007448 ORTHO05D009392 6.6e-11 70.5 59 55.9
SalBow8G2366 Salvia bowleyana HOM05D007448 ORTHO05D009392 5.6e-10 67.4 47 68.1
AUR62029317 Chenopodium quinoa HOM05D007448 ORTHO05D009392 7.3e-10 67.0 62 53.2
Glyma.12G147500 Glycine max HOM05D007448 ORTHO05D009392 1.2e-09 66.2 46 69.6
Lalb_Chr03g0030401 Lupinus albus HOM05D007448 ORTHO05D009392 1.2e-09 66.2 60 56.7
Hund02207 Selenicereus undatus HOM05D007448 ORTHO05D009392 8.0e-09 63.5 64 50.0
Atru.chr2.2826 Acer truncatum HOM05D007448 ORTHO05D009392 1.4e-08 62.8 72 62.5
MSTRG.14378 Avicennia marina HOM05D007448 ORTHO05D009392 1.8e-08 62.4 54 57.4
C07p09790 Brassica napus HOM05D004899 ORTHO05D006580 2.3e-08 62.0 65 40.0
CAN.G1320.10 Capsicum annuum HOM05D007448 ORTHO05D009392 5.8e-07 57.4 59 50.8
Pp3c7_12690 Physcomitrium patens HOM05D007448 ORTHO05D009392 5.8e-07 57.4 63 49.2
Mapoly0162s0010 Marchantia polymorpha HOM05D007448 ORTHO05D009392 7.5e-07 57.0 67 47.8
Haze_09525 Corylus avellana HOM05D008666 ORTHO05D009871 2.2e-06 55.5 49 55.1
Pp3c3_18440 Physcomitrium patens HOM05D007448 ORTHO05D009392 8.3e-06 53.5 63 44.4


User provided reference genes

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