Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr4.843 Acer truncatum HOM05D000034 ORTHO05D002688 5.4e-136 487.6 244 100.0
Atru.chr5.1596 Acer truncatum HOM05D005504 ORTHO05D002688 8.4e-105 384.0 201 95.5
Atru.chr13.1509 Acer truncatum HOM05D005504 ORTHO05D002688 1.3e-57 227.3 201 62.7
Hma1.2p1_1109F.1_g257970 Hydrangea macrophylla HOM05D005504 ORTHO05D002688 2.0e-42 176.8 201 48.3
CSS0036183 Camellia sinensis var. sinensis HOM05D005504 ORTHO05D002688 8.3e-36 154.8 202 44.1
Hma1.2p1_0076F.1_g039500 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 5.4e-35 152.1 198 43.4
Dinv00636 Davidia involucrata HOM05D021688 ORTHO05D022442 1.6e-31 140.6 187 44.9
CSS0003405 Camellia sinensis var. sinensis HOM05D005504 ORTHO05D002688 4.7e-31 139.0 203 40.9
ECA238G0287 Erigeron canadensis HOM05D005504 ORTHO05D002688 5.2e-30 135.6 194 38.1
CSS0028977 Camellia sinensis var. sinensis HOM05D005504 ORTHO05D002688 1.2e-29 134.4 204 41.7
ECA233G3708 Erigeron canadensis HOM05D004228 ORTHO05D005137 9.8e-29 131.3 211 37.4
ECA233G4621 Erigeron canadensis HOM05D000911 ORTHO05D000890 1.3e-28 131.0 211 36.5
DCAR_005138 Daucus carota HOM05D000034 ORTHO05D002688 1.7e-28 130.6 214 38.8
Hma1.2p1_0008F-2.1_g005830 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 6.4e-28 128.6 183 38.8
Potri.005G252500 Populus trichocarpa HOM05D005504 ORTHO05D002688 6.0e-26 122.1 206 42.2
EL10Ac4g08776 Beta vulgaris HOM05D005504 ORTHO05D002688 7.8e-26 121.7 216 36.1
CSS0041263 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D002688 1.3e-25 120.9 180 42.8
Hma1.2p1_0187F.1_g082350 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 2.3e-25 120.2 210 35.2
QL02p014709 Quercus lobata HOM05D005504 ORTHO05D002688 1.1e-24 117.9 217 36.9
HanXRQChr12g0355561 Helianthus annuus HOM05D005504 ORTHO05D002688 1.9e-24 117.1 194 34.5
Manes.05G124000 Manihot esculenta HOM05D005504 ORTHO05D002688 5.6e-24 115.5 208 38.5
ECA232G3538 Erigeron canadensis HOM05D005504 ORTHO05D002688 2.8e-23 113.2 190 35.8
CSS0010294 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D002688 3.6e-23 112.8 180 41.1
AUR62008529 Chenopodium quinoa HOM05D005504 ORTHO05D002688 1.8e-22 110.5 162 40.7
EL10Ac6g13234 Beta vulgaris HOM05D000034 ORTHO05D002688 2.3e-22 110.2 195 35.9
Duzib093G0882 Durio zibethinus HOM05D005504 ORTHO05D002688 2.6e-21 106.7 198 38.9
vmacro05860 Vaccinium macrocarpon HOM05D000034 ORTHO05D002688 3.4e-21 106.3 203 35.0
EL10Ac7g17364 Beta vulgaris HOM05D005504 ORTHO05D002688 7.5e-21 105.1 216 33.8
Rhsim12G0045600 Rhododendron simsii HOM05D000034 ORTHO05D002688 9.8e-21 104.8 208 32.7
QL02p021656 Quercus lobata HOM05D000034 ORTHO05D000037 1.3e-20 104.4 217 33.2
Ah.01g010920 Amaranthus hybridus HOM05D005504 ORTHO05D002688 3.7e-20 102.8 197 34.5
Ah.10g026380 Amaranthus hybridus HOM05D005504 ORTHO05D002688 1.1e-19 101.3 197 34.0
Hma1.2p1_0317F.1_g123430 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 2.4e-19 100.1 189 34.9
Rhsim08G0135500 Rhododendron simsii HOM05D000034 ORTHO05D000037 4.1e-19 99.4 155 40.6
TPR.G3960 Trifolium pratense HOM05D005504 ORTHO05D002688 4.1e-19 99.4 204 32.4
COL.COLO4_28891 Corchorus olitorius HOM05D021688 ORTHO05D022442 1.6e-18 97.4 161 36.0
Medtr8g062180 Medicago truncatula HOM05D014266 ORTHO05D018035 2.1e-18 97.1 241 28.6
Lsat_1_v5_gn_9_108520 Lactuca sativa HOM05D056539 ORTHO05D002688 4.6e-18 95.9 196 28.6
QL09p005462 Quercus lobata HOM05D000034 ORTHO05D000037 4.6e-18 95.9 203 32.0
CSS0018718 Camellia sinensis var. sinensis HOM05D005504 ORTHO05D002688 1.3e-17 94.4 121 47.1
ECA233G5926 Erigeron canadensis HOM05D012386 ORTHO05D002688 2.3e-17 93.6 141 39.7
Medtr2g076190 Medicago truncatula HOM05D005504 ORTHO05D002688 3.0e-17 93.2 210 31.4
arahy.Tifrunner.gnm1.ann1.GG48NL Arachis hypogaea HOM05D000034 ORTHO05D000037 5.1e-17 92.4 241 26.1
Lsat_1_v5_gn_9_18201 Lactuca sativa HOM05D056539 ORTHO05D002688 5.1e-17 92.4 184 29.3
arahy.Tifrunner.gnm1.ann1.WRA5CI Arachis hypogaea HOM05D000034 ORTHO05D002688 8.6e-17 91.7 241 25.7
arahy.Tifrunner.gnm1.ann1.A110NB Arachis hypogaea HOM05D000034 ORTHO05D002688 3.3e-16 89.7 241 25.3
Hma1.2p1_0301F.1_g118220 Hydrangea macrophylla HOM05D005504 ORTHO05D002688 4.3e-16 89.4 156 38.5
Hma1.2p1_1121F.1_g259230 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 9.5e-16 88.2 194 31.4
TPR.G21815 Trifolium pratense HOM05D003568 ORTHO05D004104 2.8e-15 86.7 193 30.6
arahy.Tifrunner.gnm1.ann1.C19S8A Arachis hypogaea HOM05D000034 ORTHO05D000037 4.7e-15 85.9 229 25.3
Glyma.02G129632 Glycine max HOM05D000034 ORTHO05D002688 4.7e-15 85.9 244 26.6
Glyma.07G272050 Glycine max HOM05D000034 ORTHO05D002688 4.7e-15 85.9 244 26.6
Glyma.10G052850 Glycine max HOM05D000034 ORTHO05D002688 4.7e-15 85.9 244 26.6
Lsat_1_v5_gn_7_17241 Lactuca sativa HOM05D005504 ORTHO05D002688 4.7e-15 85.9 192 28.6
Glyma.15G163350 Glycine max HOM05D000034 ORTHO05D002688 6.2e-15 85.5 244 26.6
arahy.Tifrunner.gnm1.ann1.0J418G Arachis hypogaea HOM05D000034 ORTHO05D002688 1.4e-14 84.3 241 25.3
Cfa015598 Carpinus fangiana HOM05D012386 ORTHO05D002688 2.3e-14 83.6 101 45.5
Haze_23085 Corylus avellana HOM05D012386 ORTHO05D002688 2.3e-14 83.6 155 37.4
AUR62000863 Chenopodium quinoa HOM05D000034 ORTHO05D000037 1.2e-13 81.3 141 39.0
Haze_00946 Corylus avellana HOM05D012386 ORTHO05D002688 1.2e-13 81.3 101 43.6
Manes.03G183002 Manihot esculenta HOM05D012386 ORTHO05D002688 1.2e-13 81.3 95 42.1
arahy.Tifrunner.gnm1.ann1.ZA5JKI Arachis hypogaea HOM05D000034 ORTHO05D002688 2.6e-13 80.1 255 25.5
Lj1g0008887 Lotus japonicus HOM05D000034 ORTHO05D002688 3.4e-13 79.7 232 27.2
Lj1g0004986 Lotus japonicus HOM05D000034 ORTHO05D002688 4.4e-13 79.3 232 27.6
Medtr5g025995 Medicago truncatula HOM05D005504 ORTHO05D002688 4.4e-13 79.3 211 30.8
CANSAT78G0906 Cannabis sativa HOM05D012386 ORTHO05D002688 5.8e-13 79.0 111 39.6
Lsat_1_v5_gn_3_28480 Lactuca sativa HOM05D005504 ORTHO05D002688 9.9e-13 78.2 218 28.4
Ah.05g174390 Amaranthus hybridus HOM05D005504 ORTHO05D002688 1.7e-12 77.4 160 34.4
AUR62040606 Chenopodium quinoa HOM05D000034 ORTHO05D000037 1.7e-12 77.4 188 30.3
QL06p003849 Quercus lobata HOM05D012386 ORTHO05D002688 2.9e-12 76.6 100 42.0
Medtr4g036040 Medicago truncatula HOM05D000034 ORTHO05D002688 1.1e-11 74.7 233 27.0
Atru.chr1.2748 Acer truncatum HOM05D005504 ORTHO05D002688 1.4e-11 74.3 137 32.8
arahy.Tifrunner.gnm1.ann1.UA7YVD Arachis hypogaea HOM05D000034 ORTHO05D002688 1.4e-11 74.3 227 25.1
ECA232G2669 Erigeron canadensis HOM05D005504 ORTHO05D002688 1.9e-11 73.9 193 25.9
DCAR_015793 Daucus carota HOM05D005504 ORTHO05D002688 3.2e-11 73.2 80 47.5
Medtr7g110505 Medicago truncatula HOM05D005504 ORTHO05D002688 3.2e-11 73.2 211 29.9
arahy.Tifrunner.gnm1.ann1.W93U0I Arachis hypogaea HOM05D000034 ORTHO05D002688 7.1e-11 72.0 253 22.5
CSS0049663 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D002688 7.1e-11 72.0 103 39.8
arahy.Tifrunner.gnm1.ann1.PAB5ST Arachis hypogaea HOM05D000034 ORTHO05D002688 9.2e-11 71.6 143 31.5
arahy.Tifrunner.gnm1.ann1.97STDM Arachis hypogaea HOM05D000034 ORTHO05D002688 1.2e-10 71.2 255 23.5
arahy.Tifrunner.gnm1.ann1.V1HUJD Arachis hypogaea HOM05D000034 ORTHO05D002688 1.2e-10 71.2 256 23.0
CSS0015173 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D002688 1.2e-10 71.2 98 40.8
arahy.Tifrunner.gnm1.ann1.71FTPI Arachis hypogaea HOM05D000034 ORTHO05D002688 1.6e-10 70.9 251 25.5
arahy.Tifrunner.gnm1.ann1.R7WLJ8 Arachis hypogaea HOM05D000034 ORTHO05D002688 2.1e-10 70.5 256 22.7
Lsat_1_v5_gn_5_85721 Lactuca sativa HOM05D000039 ORTHO05D000870 2.1e-10 70.5 120 30.8
CAN.G79.92 Capsicum annuum HOM05D008574 ORTHO05D010611 2.7e-10 70.1 203 29.6
Medtr3g027145 Medicago truncatula HOM05D005504 ORTHO05D002688 1.0e-09 68.2 210 26.2
Medtr7g094380 Medicago truncatula HOM05D005504 ORTHO05D002688 1.0e-09 68.2 210 26.2
TPR.G35176 Trifolium pratense HOM05D005504 ORTHO05D002688 1.3e-09 67.8 135 34.8
arahy.Tifrunner.gnm1.ann1.UP8VLY Arachis hypogaea HOM05D000034 ORTHO05D002688 3.0e-09 66.6 232 26.3
arahy.Tifrunner.gnm1.ann1.H4XJEH Arachis hypogaea HOM05D000034 ORTHO05D002688 3.9e-09 66.2 252 25.0
vmacro21865 Vaccinium macrocarpon HOM05D000665 ORTHO05D002688 3.9e-09 66.2 73 45.2
vmacro23405 Vaccinium macrocarpon HOM05D000665 ORTHO05D002688 3.9e-09 66.2 73 45.2
arahy.Tifrunner.gnm1.ann1.TXJ7KC Arachis hypogaea HOM05D000034 ORTHO05D002688 5.1e-09 65.9 221 24.9
Hma1.2p1_0035F.1_g021930 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 6.6e-09 65.5 195 29.7
CSS0017383 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D010947 8.6e-09 65.1 185 25.9
Medtr5g086750 Medicago truncatula HOM05D005504 ORTHO05D002688 8.6e-09 65.1 208 26.0
Medtr8g014565 Medicago truncatula HOM05D005504 ORTHO05D002688 1.1e-08 64.7 137 38.0
Medtr6g081975 Medicago truncatula HOM05D005504 ORTHO05D002688 1.5e-08 64.3 137 37.2
AUR62042045 Chenopodium quinoa HOM05D012386 ORTHO05D002688 1.9e-08 63.9 96 37.5
ECA248G2768 Erigeron canadensis HOM05D005504 ORTHO05D002688 1.9e-08 63.9 103 35.0
Hma1.2p1_0131F.1_g060610 Hydrangea macrophylla HOM05D000034 ORTHO05D010947 1.9e-08 63.9 197 26.9
Atru.chr3.1800 Acer truncatum HOM05D005504 ORTHO05D002688 3.3e-08 63.2 60 50.0
COL.COLO4_32183 Corchorus olitorius HOM05D021688 ORTHO05D022442 3.3e-08 63.2 88 35.2
CAN.G997.9 Capsicum annuum HOM05D008574 ORTHO05D010611 4.3e-08 62.8 191 29.8
ECA233G0508 Erigeron canadensis HOM05D000034 ORTHO05D000037 4.3e-08 62.8 78 44.9
Hma1.2p1_0269F.1_g107750 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 4.3e-08 62.8 157 31.8
arahy.Tifrunner.gnm1.ann1.QZM42C Arachis hypogaea HOM05D000034 ORTHO05D002688 5.6e-08 62.4 207 26.1
Hma1.2p1_0609F.1_g188530 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 5.6e-08 62.4 69 42.0
Hma1.2p1_0018F.1_g013500 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 1.2e-07 61.2 200 28.5
arahy.Tifrunner.gnm1.ann1.5RUD0X Arachis hypogaea HOM05D000034 ORTHO05D002688 2.1e-07 60.5 247 24.3
CSS0009964 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D010947 2.1e-07 60.5 185 23.8
QL08p058251 Quercus lobata HOM05D012386 ORTHO05D010611 2.1e-07 60.5 108 35.2
arahy.Tifrunner.gnm1.ann1.108E1K Arachis hypogaea HOM05D000034 ORTHO05D002688 2.8e-07 60.1 186 28.0
arahy.Tifrunner.gnm1.ann1.AF0AHW Arachis hypogaea HOM05D000034 ORTHO05D000037 2.8e-07 60.1 142 28.2
Hma1.2p1_3244F.1_g334330 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 2.8e-07 60.1 143 34.3
Lj1g0022373 Lotus japonicus HOM05D000034 ORTHO05D002688 6.2e-07 58.9 235 22.1
Atru.chr3.1653 Acer truncatum HOM05D000034 ORTHO05D000037 8.1e-07 58.5 68 47.1
CSS0045906 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D010947 1.8e-06 57.4 77 44.2
CSS0010215 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D010947 3.1e-06 56.6 187 27.3
arahy.Tifrunner.gnm1.ann1.PT170J Arachis hypogaea HOM05D000034 ORTHO05D002688 4.0e-06 56.2 250 23.2
arahy.Tifrunner.gnm1.ann1.S358G7 Arachis hypogaea HOM05D000034 ORTHO05D002688 4.0e-06 56.2 142 28.9
Medtr7g047540 Medicago truncatula HOM05D000034 ORTHO05D002688 5.2e-06 55.8 135 30.4
Medtr7g451740 Medicago truncatula HOM05D000034 ORTHO05D002688 5.2e-06 55.8 135 30.4
arahy.Tifrunner.gnm1.ann1.AAD92C Arachis hypogaea HOM05D000034 ORTHO05D002688 8.9e-06 55.1 205 27.3


User provided reference genes

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