Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr4.839 Acer truncatum HOM05D003899 ORTHO05D003655 1.1e-77 293.9 241 100.0
Dinv24330 Davidia involucrata HOM05D003899 ORTHO05D003655 9.3e-40 167.9 121 65.3
Thecc.01G128000 Theobroma cacao HOM05D003899 ORTHO05D003655 3.6e-39 166.0 124 69.4
Ciclev10003780m.g Citrus clementina HOM05D003899 ORTHO05D003655 6.7e-38 161.8 123 65.0
Manes.12G153900 Manihot esculenta HOM05D003899 ORTHO05D003655 6.7e-38 161.8 125 64.8
Actinidia06640 Actinidia chinensis HOM05D003899 ORTHO05D003655 5.9e-34 148.7 122 60.7
QL06p029227 Quercus lobata HOM05D003899 ORTHO05D003655 1.4e-32 144.1 123 61.8
Duzib264G1053 Durio zibethinus HOM05D003899 ORTHO05D003655 3.2e-32 142.9 121 64.5
Potri.005G060700 Populus trichocarpa HOM05D003899 ORTHO05D003655 1.6e-31 140.6 125 60.0
Potri.007G108100 Populus trichocarpa HOM05D003899 ORTHO05D003655 3.0e-30 136.3 123 58.5
AUR62017911 Chenopodium quinoa HOM05D003899 ORTHO05D003655 6.9e-27 125.2 123 53.7
Rhsim10G0136200 Rhododendron simsii HOM05D003899 ORTHO05D003655 2.0e-26 123.6 117 55.6
RhsimUnG0132700 Rhododendron simsii HOM05D003899 ORTHO05D003655 2.0e-26 123.6 117 55.6
Gohir.A11G224804 Gossypium hirsutum HOM05D003899 ORTHO05D003655 2.6e-26 123.2 105 61.0
Aqoxy5G02188 Aquilegia oxysepala HOM05D003899 ORTHO05D003655 1.0e-25 121.3 137 50.4
Haze_17704 Corylus avellana HOM05D003899 ORTHO05D003655 2.2e-25 120.2 126 48.4
EL10Ac7g17632 Beta vulgaris HOM05D003899 ORTHO05D003655 8.5e-25 118.2 116 56.0
Nn5g28623 Nelumbo nucifera HOM05D003899 ORTHO05D003655 1.1e-24 117.9 120 55.0
Cfa018365 Carpinus fangiana HOM05D003899 ORTHO05D003655 1.4e-24 117.5 126 48.4
EL10Ac6g15278 Beta vulgaris HOM05D003899 ORTHO05D003655 2.5e-24 116.7 101 59.4
Gohir.A02G066500 Gossypium hirsutum HOM05D003899 ORTHO05D003655 2.5e-24 116.7 128 50.8
PSO017G4320 Papaver somniferum HOM05D003899 ORTHO05D003655 4.2e-24 115.9 132 49.2
MBI06_g43012_MAGBIO Magnolia biondii HOM05D003899 ORTHO05D003655 1.2e-23 114.4 118 52.5
AUR62003600 Chenopodium quinoa HOM05D003899 ORTHO05D003655 6.1e-23 112.1 122 48.4
Thecc.08G144600 Theobroma cacao HOM05D003899 ORTHO05D003655 1.0e-22 111.3 127 46.5
TWI32G0122 Tripterygium wilfordii HOM05D003899 ORTHO05D003655 6.7e-22 108.6 120 47.5
CAN.G375.87 Capsicum annuum HOM05D003899 ORTHO05D003655 8.8e-22 108.2 127 48.0
AUR62043709 Chenopodium quinoa HOM05D003899 ORTHO05D003655 2.0e-21 107.1 110 51.8
FvH4_2g14670 Fragaria vesca HOM05D003899 ORTHO05D003655 2.0e-21 107.1 84 58.3
FAN24G0119 Fragaria x ananassa HOM05D003899 ORTHO05D003655 2.0e-21 107.1 84 58.3
Gohir.D11G228940 Gossypium hirsutum HOM05D003899 ORTHO05D003655 5.7e-21 105.5 95 60.0
FAN15G3500 Fragaria x ananassa HOM05D003899 ORTHO05D003655 7.4e-21 105.1 84 58.3
FAN20G0153 Fragaria x ananassa HOM05D003899 ORTHO05D003655 7.4e-21 105.1 98 53.1
Gorai.003G068900 Gossypium raimondii HOM05D003899 ORTHO05D003655 7.4e-21 105.1 95 58.9
MD05G1014900 Malus domestica HOM05D003899 ORTHO05D003655 1.7e-20 104.0 93 51.6
Gorai.005G081600 Gossypium raimondii HOM05D003899 ORTHO05D003655 2.2e-20 103.6 128 47.7
SGA_v2.0_scaffold73G24343 Striga asiatica HOM05D003899 ORTHO05D003655 3.7e-20 102.8 121 49.6
Duzib041G0166 Durio zibethinus HOM05D003899 ORTHO05D003655 4.8e-20 102.4 128 45.3
PSO170G2020 Papaver somniferum HOM05D003899 ORTHO05D003655 1.4e-19 100.9 134 46.3
COL.COLO4_14024 Corchorus olitorius HOM05D003899 ORTHO05D003655 3.1e-19 99.8 99 55.6
RcHm_v2.0_Chr6g0277141 Rosa chinensis HOM05D003899 ORTHO05D003655 5.3e-19 99.0 85 56.5
CANSAT25G0207 Cannabis sativa HOM05D003899 ORTHO05D003655 9.1e-19 98.2 126 41.3
Prupe.8G018800 Prunus persica HOM05D003899 ORTHO05D003655 9.1e-19 98.2 109 45.9
BolC6t35162H Brassica oleracea HOM05D003899 ORTHO05D003655 2.0e-18 97.1 88 51.1
DCAR_007049 Daucus carota HOM05D003899 ORTHO05D003655 2.0e-18 97.1 117 47.0
BcaB07g33974 Brassica carinata HOM05D003899 ORTHO05D003655 2.6e-18 96.7 104 46.2
TAR381G0487 Trochodendron aralioides HOM05D003899 ORTHO05D003655 3.5e-18 96.3 85 55.3
Thhalv10012251m.g Eutrema salsugineum HOM05D003899 ORTHO05D003655 7.7e-18 95.1 98 51.0
A10p07750 Brassica napus HOM05D003899 ORTHO05D003655 1.0e-17 94.7 86 51.2
BraSC36t46027Z Brassica rapa HOM05D003899 ORTHO05D003655 1.0e-17 94.7 86 51.2
Lj1g0026176 Lotus japonicus HOM05D003899 ORTHO05D003655 1.0e-17 94.7 140 39.3
Aqoxy3G00817 Aquilegia oxysepala HOM05D003899 ORTHO05D003655 1.3e-17 94.4 130 43.8
CiPaw.16G017800 Carya illinoinensis HOM05D003899 ORTHO05D003655 1.3e-17 94.4 129 41.1
Dinv03732 Davidia involucrata HOM05D000043 ORTHO05D002577 1.7e-17 94.0 88 56.8
Thhalv10012331m.g Eutrema salsugineum HOM05D003899 ORTHO05D003655 2.2e-17 93.6 88 51.1
Nn1g06203 Nelumbo nucifera HOM05D003899 ORTHO05D003655 2.2e-17 93.6 129 45.7
CARHR035480 Cardamine hirsuta HOM05D003899 ORTHO05D003655 2.9e-17 93.2 99 47.5
Nn1g06205 Nelumbo nucifera HOM05D003899 ORTHO05D003655 2.9e-17 93.2 84 51.2
THA.LOC104806849 Tarenaya hassleriana HOM05D003899 ORTHO05D003655 5.0e-17 92.4 95 46.3
Nn5g28622 Nelumbo nucifera HOM05D003899 ORTHO05D003655 6.5e-17 92.0 83 51.8
Sabra07G0088500 Salix brachista HOM05D000850 ORTHO05D000266 8.5e-17 91.7 121 43.0
HanXRQChr04g0125201 Helianthus annuus HOM05D003899 ORTHO05D003655 1.9e-16 90.5 126 41.3
BcaB03g16849 Brassica carinata HOM05D003899 ORTHO05D003655 2.5e-16 90.1 109 45.0
ClCG08G006450 Citrullus lanatus HOM05D000058 ORTHO05D000077 2.5e-16 90.1 112 42.9
TWI79G1413 Tripterygium wilfordii HOM05D003899 ORTHO05D003655 2.5e-16 90.1 75 61.3
PGSC0003DMG400027629 Solanum tuberosum HOM05D003899 ORTHO05D003655 7.2e-16 88.6 90 52.2
COL.COLO4_08943 Corchorus olitorius HOM05D003899 ORTHO05D003655 9.4e-16 88.2 111 47.7
PSO126G0001 Papaver somniferum HOM05D003899 ORTHO05D003655 9.4e-16 88.2 73 60.3
AT5G48920 Arabidopsis thaliana HOM05D003899 ORTHO05D003655 1.6e-15 87.4 124 44.4
CsaV3_6G030980 Cucumis sativus L. HOM05D003899 ORTHO05D003655 2.7e-15 86.7 99 45.5
AL1G51910 Arabidopsis lyrata HOM05D003899 ORTHO05D003655 4.7e-15 85.9 90 44.4
arahy.Tifrunner.gnm1.ann1.UE47UQ Arachis hypogaea HOM05D003899 ORTHO05D003655 4.7e-15 85.9 103 45.6
QL02p025320 Quercus lobata HOM05D003899 ORTHO05D003655 4.7e-15 85.9 103 47.6
CARHR046070 Cardamine hirsuta HOM05D003899 ORTHO05D003655 8.0e-15 85.1 108 45.4
Gohir.D02G072400 Gossypium hirsutum HOM05D003899 ORTHO05D003655 8.0e-15 85.1 129 44.2
Lj2C604T4 Lonicera japonica HOM05D003899 ORTHO05D003655 8.0e-15 85.1 82 48.8
C06p00330 Brassica napus HOM05D003899 ORTHO05D003655 1.0e-14 84.7 88 47.7
AT1G43790 Arabidopsis thaliana HOM05D003899 ORTHO05D003655 1.4e-14 84.3 90 43.3
Hma1.2p1_0528F.1_g173010 Hydrangea macrophylla HOM05D003899 ORTHO05D003655 1.4e-14 84.3 76 53.9
Sed0026893 Sechium edule HOM05D003899 ORTHO05D003655 1.4e-14 84.3 117 41.9
CANSAT11G1227 Cannabis sativa HOM05D003899 ORTHO05D003655 1.8e-14 84.0 79 51.9
Cpa.g.sc42.130 Carica papaya HOM05D003899 ORTHO05D003655 1.8e-14 84.0 85 50.6
PGR044G0858 Punica granatum HOM05D003899 ORTHO05D003655 1.8e-14 84.0 74 56.8
Medtr1g029140 Medicago truncatula HOM05D003899 ORTHO05D003655 2.3e-14 83.6 123 39.0
MELO3C027328.2 Cucumis melo HOM05D003899 ORTHO05D003655 3.0e-14 83.2 90 48.9
Psat6g039960 Pisum sativum HOM05D003899 ORTHO05D003655 3.0e-14 83.2 122 40.2
MSTRG.1375 Avicennia marina HOM05D003899 ORTHO05D003655 4.0e-14 82.8 116 41.4
DCAR_001362 Daucus carota HOM05D003899 ORTHO05D003655 6.7e-14 82.0 80 50.0
Lj2C604T3 Lonicera japonica HOM05D003899 ORTHO05D003655 6.7e-14 82.0 85 44.7
Glyma.14G121800 Glycine max HOM05D003899 ORTHO05D003655 8.8e-14 81.6 124 41.1
Sp1g32910 Schrenkiella parvula HOM05D003899 ORTHO05D003655 4.4e-13 79.3 88 44.3
Nitab4.5_0015327g0010 Nicotiana tabacum HOM05D003899 ORTHO05D003655 5.7e-13 79.0 103 39.8
Carub.0001s4477 Capsella rubella HOM05D003899 ORTHO05D003655 9.7e-13 78.2 109 42.2
Sp1g41920 Schrenkiella parvula HOM05D003899 ORTHO05D003655 9.7e-13 78.2 102 44.1
Dinv41123 Davidia involucrata HOM05D000043 ORTHO05D002577 1.7e-12 77.4 101 36.6
Ca_12820_v3 Cicer arietinum L. HOM05D003899 ORTHO05D003655 2.2e-12 77.0 128 35.9
MELO3C023688.2 Cucumis melo HOM05D003899 ORTHO05D003655 2.2e-12 77.0 103 45.6
Lalb_Chr25g0281721 Lupinus albus HOM05D003899 ORTHO05D003655 3.7e-12 76.3 108 43.5
AL1G64600 Arabidopsis lyrata HOM05D003899 ORTHO05D003655 4.8e-12 75.9 110 40.9
Nitab4.5_0002974g0030 Nicotiana tabacum HOM05D003899 ORTHO05D003655 8.2e-12 75.1 116 39.7
BcaC08g42822 Brassica carinata HOM05D003899 ORTHO05D003655 1.8e-11 73.9 71 49.3
Carub.0001s3477 Capsella rubella HOM05D003899 ORTHO05D003655 4.1e-11 72.8 90 40.0
Migut.N03236 Erythranthe guttata HOM05D003899 ORTHO05D003655 4.1e-11 72.8 83 45.8
Sc02g0004420 Simmondsia chinensis HOM05D003899 ORTHO05D003655 7.0e-11 72.0 74 51.4
CSS0000461 Camellia sinensis var. sinensis HOM05D003899 ORTHO05D003655 1.2e-10 71.2 72 45.8
Lsat_1_v5_gn_5_108780 Lactuca sativa HOM05D003899 ORTHO05D003655 1.6e-10 70.9 91 46.2
THA.LOC104800071 Tarenaya hassleriana HOM05D003899 ORTHO05D003655 1.6e-10 70.9 85 44.7
Migut.M00600 Erythranthe guttata HOM05D003899 ORTHO05D003655 2.0e-10 70.5 84 50.0
PGR044G1758 Punica granatum HOM05D003899 ORTHO05D003655 2.0e-10 70.5 73 52.1
Cfa013717 Carpinus fangiana HOM05D009119 ORTHO05D003655 2.7e-10 70.1 84 44.0
Oeu030532.1 Olea europaea HOM05D003899 ORTHO05D003655 3.5e-10 69.7 89 41.6
Lsat_1_v5_gn_9_107661 Lactuca sativa HOM05D003899 ORTHO05D003655 5.9e-10 68.9 91 44.0
Sc16g0003890 Simmondsia chinensis HOM05D003899 ORTHO05D003655 7.7e-10 68.6 92 35.9
HanXRQChr05g0161081 Helianthus annuus HOM05D003899 ORTHO05D003655 1.0e-09 68.2 84 44.0
Sed0020885 Sechium edule HOM05D003899 ORTHO05D003655 1.0e-09 68.2 115 38.3
Dinv25809 Davidia involucrata HOM05D003899 ORTHO05D003655 1.3e-09 67.8 69 42.0
Solyc07g045590.1 Solanum lycopersicum HOM05D003899 ORTHO05D003655 1.3e-09 67.8 124 34.7
Haze_22364 Corylus avellana HOM05D009119 ORTHO05D003655 1.7e-09 67.4 84 42.9
QL09p016294 Quercus lobata HOM05D009119 ORTHO05D003655 1.7e-09 67.4 71 50.7
Lsat_1_v5_gn_5_108760 Lactuca sativa HOM05D003899 ORTHO05D003655 2.2e-09 67.0 90 44.4
Duzib093G0910 Durio zibethinus HOM05D003899 ORTHO05D003655 2.9e-09 66.6 87 39.1
Duzib147G0063 Durio zibethinus HOM05D003899 ORTHO05D003655 3.8e-09 66.2 101 45.5
QL09p016276 Quercus lobata HOM05D009119 ORTHO05D003655 3.8e-09 66.2 71 50.7
ECA246G5022 Erigeron canadensis HOM05D003899 ORTHO05D003655 5.0e-09 65.9 75 44.0
Medtr1g008620 Medicago truncatula HOM05D003899 ORTHO05D003655 5.0e-09 65.9 78 46.2
Psat6g033720 Pisum sativum HOM05D003899 ORTHO05D003655 5.0e-09 65.9 84 44.0
C07p00500 Brassica napus HOM05D003899 ORTHO05D003655 8.5e-09 65.1 83 42.2
Ah.05g167520 Amaranthus hybridus HOM05D000219 ORTHO05D000226 1.1e-08 64.7 105 36.2
PGSC0003DMG400024811 Solanum tuberosum HOM05D003899 ORTHO05D003655 2.5e-08 63.5 113 38.9
BcaC06g36741 Brassica carinata HOM05D003899 ORTHO05D003655 3.2e-08 63.2 83 41.0
BolC7t40496H Brassica oleracea HOM05D003899 ORTHO05D003655 3.2e-08 63.2 83 41.0
Solyc03g033290.1 Solanum lycopersicum HOM05D003899 ORTHO05D003655 3.2e-08 63.2 92 45.7
COL.COLO4_11973 Corchorus olitorius HOM05D009119 ORTHO05D003655 5.5e-08 62.4 100 39.0
Thecc.08G065300 Theobroma cacao HOM05D009119 ORTHO05D003655 5.5e-08 62.4 96 42.7
MD10G1014900 Malus domestica HOM05D003899 ORTHO05D003655 7.2e-08 62.0 93 37.6
BraA07t27814Z Brassica rapa HOM05D003899 ORTHO05D003655 1.2e-07 61.2 83 39.8
ECA238G1798 Erigeron canadensis HOM05D003899 ORTHO05D003655 1.2e-07 61.2 91 37.4
Peaxi162Scf00263g00033 Petunia axillaris HOM05D003899 ORTHO05D003655 1.2e-07 61.2 106 31.1
Manes.18G087500 Manihot esculenta HOM05D003899 ORTHO05D003655 1.6e-07 60.8 85 42.4
PGSC0003DMG400024810 Solanum tuberosum HOM05D003899 ORTHO05D003655 1.6e-07 60.8 87 44.8
ECA246G3613 Erigeron canadensis HOM05D003899 ORTHO05D003655 2.1e-07 60.5 97 37.1
Medtr1g008675 Medicago truncatula HOM05D003899 ORTHO05D003655 2.7e-07 60.1 97 34.0
THA.LOC104827412 Tarenaya hassleriana HOM05D009119 ORTHO05D003655 2.7e-07 60.1 95 44.2
TPR.G12083 Trifolium pratense HOM05D003899 ORTHO05D003655 2.7e-07 60.1 83 37.3
TWI60G1060 Tripterygium wilfordii HOM05D003899 ORTHO05D003655 2.7e-07 60.1 84 39.3
AUR62026786 Chenopodium quinoa HOM05D003899 ORTHO05D003655 3.6e-07 59.7 96 34.4
Nitab4.5_0000299g0020 Nicotiana tabacum HOM05D003899 ORTHO05D003655 3.6e-07 59.7 115 33.0
Nitab4.5_0008388g0020 Nicotiana tabacum HOM05D003899 ORTHO05D003655 3.6e-07 59.7 84 40.5
Nitab4.5_0001140g0230 Nicotiana tabacum HOM05D003899 ORTHO05D003655 6.1e-07 58.9 84 40.5
TPR.G33315 Trifolium pratense HOM05D003899 ORTHO05D003655 6.1e-07 58.9 85 37.6
ClCG09G009790 Citrullus lanatus HOM05D003899 ORTHO05D003655 8.0e-07 58.5 115 37.4
HanXRQChr08g0232541 Helianthus annuus HOM05D003899 ORTHO05D003655 1.0e-06 58.2 77 41.6
CAN.G1012.7 Capsicum annuum HOM05D003899 ORTHO05D003655 1.4e-06 57.8 82 37.8
CiPaw.15G021500 Carya illinoinensis HOM05D003899 ORTHO05D003655 1.4e-06 57.8 82 39.0
Cpa.g.sc49.66 Carica papaya HOM05D003899 ORTHO05D003655 2.3e-06 57.0 87 39.1
Duzib093G1486 Durio zibethinus HOM05D009119 ORTHO05D003655 3.0e-06 56.6 108 38.9
AUR62013490 Chenopodium quinoa HOM05D003899 ORTHO05D003655 4.0e-06 56.2 96 33.3
Os08g0108300 Oryza sativa ssp. japonica HOM05D053309 ORTHO05D003655 4.0e-06 56.2 111 39.6
CiPaw.04G086500 Carya illinoinensis HOM05D003899 ORTHO05D003655 5.2e-06 55.8 38 73.7
Nitab4.5_0004770g0030 Nicotiana tabacum HOM05D003899 ORTHO05D003655 5.2e-06 55.8 115 31.3
Phvul.001G073300 Phaseolus vulgaris HOM05D003899 ORTHO05D003655 5.2e-06 55.8 57 47.4
PGR042G3889 Punica granatum HOM05D009119 ORTHO05D003655 5.2e-06 55.8 68 47.1
QL02p025328 Quercus lobata HOM05D003899 ORTHO05D003655 5.2e-06 55.8 76 43.4
SGA_v2.0_scaffold25G11158 Striga asiatica HOM05D003899 ORTHO05D003655 6.8e-06 55.5 94 42.6
CSS0023777 Camellia sinensis var. sinensis HOM05D003899 ORTHO05D003655 8.8e-06 55.1 80 33.8


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