Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr4.835 Acer truncatum HOM05D003557 ORTHO05D001267 2.5e-200 702.2 430 100.0
CiPaw.03G128800 Carya illinoinensis HOM05D003557 ORTHO05D001267 1.0e-76 291.6 402 48.0
Cfa002823 Carpinus fangiana HOM05D003557 ORTHO05D001267 9.4e-75 285.0 462 42.2
FAN26G1648 Fragaria x ananassa HOM05D003557 ORTHO05D001267 1.1e-72 278.1 404 44.1
FvH4_1g24100 Fragaria vesca HOM05D003557 ORTHO05D001267 3.3e-72 276.6 404 43.8
Duzib147G0862 Durio zibethinus HOM05D003557 ORTHO05D001267 5.7e-72 275.8 467 47.8
FAN28G2033 Fragaria x ananassa HOM05D003557 ORTHO05D001267 7.4e-72 275.4 404 43.3
FAN19G1884 Fragaria x ananassa HOM05D003557 ORTHO05D001267 9.7e-72 275.0 404 43.6
Thecc.01G127600 Theobroma cacao HOM05D003557 ORTHO05D001267 1.3e-71 274.6 467 48.4
RcHm_v2.0_Chr2g0120281 Rosa chinensis HOM05D003557 ORTHO05D001267 2.2e-71 273.9 399 45.9
Prupe.6G159100 Prunus persica HOM05D003557 ORTHO05D001267 6.9e-70 268.9 398 45.0
CANSAT01G1165 Cannabis sativa HOM05D003557 ORTHO05D001267 4.5e-69 266.2 402 44.8
FAN23G1052 Fragaria x ananassa HOM05D003557 ORTHO05D001267 1.7e-68 264.2 398 45.7
Sabra07G0088300 Salix brachista HOM05D003557 ORTHO05D001267 6.5e-68 262.3 396 44.9
MD15G1337600 Malus domestica HOM05D003557 ORTHO05D001267 2.5e-67 260.4 399 45.6
Potri.005G061100 Populus trichocarpa HOM05D003557 ORTHO05D001267 7.2e-67 258.8 397 45.1
Sabra05G0051500 Salix brachista HOM05D003557 ORTHO05D001267 1.6e-66 257.7 398 43.7
Duzib187G0404 Durio zibethinus HOM05D003557 ORTHO05D001267 1.0e-65 255.0 461 46.2
Manes.12G153500 Manihot esculenta HOM05D003557 ORTHO05D001267 3.9e-65 253.1 397 45.3
Gohir.A11G227304 Gossypium hirsutum HOM05D003557 ORTHO05D001267 2.0e-64 250.8 381 44.9
QL06p029317 Quercus lobata HOM05D003557 ORTHO05D001267 5.7e-64 249.2 403 44.4
TWI31G0955 Tripterygium wilfordii HOM05D003557 ORTHO05D001267 1.3e-63 248.1 415 41.2
Potri.007G107800 Populus trichocarpa HOM05D003557 ORTHO05D001267 3.7e-63 246.5 397 43.8
Gorai.003G068000 Gossypium raimondii HOM05D003557 ORTHO05D001267 1.1e-62 245.0 381 43.0
TWI75G1801 Tripterygium wilfordii HOM05D003557 ORTHO05D001267 1.1e-62 245.0 382 43.5
Phvul.009G149100 Phaseolus vulgaris HOM05D003557 ORTHO05D001267 5.3e-62 242.7 429 38.7
MD01G1013400 Malus domestica HOM05D003557 ORTHO05D001267 3.5e-61 240.0 398 44.2
Duzib160G0654 Durio zibethinus HOM05D003557 ORTHO05D001267 2.9e-60 236.9 374 47.1
VMungo0647G1249 Vigna mungo HOM05D003557 ORTHO05D001267 1.0e-57 228.4 428 37.6
Glyma.04G214200 Glycine max HOM05D003557 ORTHO05D001267 2.3e-57 227.3 421 38.2
Dinv24328 Davidia involucrata HOM05D003557 ORTHO05D001267 2.0e-53 214.2 472 37.3
Gohir.A11G227302 Gossypium hirsutum HOM05D003557 ORTHO05D001267 3.2e-51 206.8 387 43.7
Lalb_Chr11g0068351 Lupinus albus HOM05D003557 ORTHO05D001267 3.6e-50 203.4 357 37.8
Ca_17647_v3 Cicer arietinum L. HOM05D003557 ORTHO05D001267 8.0e-50 202.2 430 36.3
CsaV3_6G041740 Cucumis sativus L. HOM05D003557 ORTHO05D001267 3.0e-49 200.3 395 41.8
MELO3C008046.2 Cucumis melo HOM05D003557 ORTHO05D001267 1.5e-48 198.0 395 41.8
TAR625G0023 Trochodendron aralioides HOM05D003557 ORTHO05D001267 1.3e-47 194.9 408 37.3
arahy.Tifrunner.gnm1.ann1.A43QXH Arachis hypogaea HOM05D003557 ORTHO05D001267 3.7e-47 193.4 422 35.3
Glyma.06G152200 Glycine max HOM05D003557 ORTHO05D001267 6.3e-47 192.6 420 36.4
ClCG01G015510 Citrullus lanatus HOM05D003557 ORTHO05D001267 1.1e-46 191.8 394 41.1
Ca_16932_v3 Cicer arietinum L. HOM05D003557 ORTHO05D001267 2.7e-45 187.2 449 34.1
TAR376G0938 Trochodendron aralioides HOM05D003557 ORTHO05D001267 3.5e-45 186.8 420 33.3
Lj1g0022982 Lotus japonicus HOM05D003557 ORTHO05D001267 4.5e-45 186.4 411 35.5
Lalb_Chr07g0184471 Lupinus albus HOM05D003557 ORTHO05D001267 1.3e-44 184.9 430 33.5
Medtr8g093480 Medicago truncatula HOM05D003557 ORTHO05D001267 1.6e-42 177.9 380 36.6
Haze_25122 Corylus avellana HOM05D003557 ORTHO05D001267 8.0e-42 175.6 444 33.8
Lalb_Chr08g0238451 Lupinus albus HOM05D003557 ORTHO05D001267 8.0e-42 175.6 342 36.3
PGR102G0661 Punica granatum HOM05D003557 ORTHO05D001267 1.8e-41 174.5 261 42.5
Lj4g0000833 Lotus japonicus HOM05D003557 ORTHO05D001267 6.8e-41 172.6 432 33.1
TPR.G37341 Trifolium pratense HOM05D003557 ORTHO05D001267 1.5e-40 171.4 418 33.3
Lalb_Chr23g0272561 Lupinus albus HOM05D003557 ORTHO05D001267 2.0e-40 171.0 327 38.2
Actinidia20097 Actinidia chinensis HOM05D003557 ORTHO05D001267 2.6e-40 170.6 286 44.1
Sed0024902 Sechium edule HOM05D003557 ORTHO05D001267 1.3e-39 168.3 392 38.5
arahy.Tifrunner.gnm1.ann1.N565XM Arachis hypogaea HOM05D003557 ORTHO05D001267 4.9e-39 166.4 255 40.8
Cpa.g.sc42.122 Carica papaya HOM05D003557 ORTHO05D001267 4.9e-39 166.4 397 33.0
Nn5g28628 Nelumbo nucifera HOM05D003557 ORTHO05D001267 4.9e-39 166.4 432 32.2
Gorai.005G122500 Gossypium raimondii HOM05D003557 ORTHO05D001267 6.3e-39 166.0 380 35.8
TAR628G1562 Trochodendron aralioides HOM05D003557 ORTHO05D001267 3.1e-38 163.7 468 31.2
CSS0011515 Camellia sinensis var. sinensis HOM05D003557 ORTHO05D001267 5.9e-37 159.5 337 37.1
arahy.Tifrunner.gnm1.ann1.J2NKIW Arachis hypogaea HOM05D003557 ORTHO05D001267 7.7e-37 159.1 252 40.9
AUR62003603 Chenopodium quinoa HOM05D003557 ORTHO05D001267 7.7e-37 159.1 407 32.9
TPR.G34650 Trifolium pratense HOM05D003557 ORTHO05D001267 1.1e-35 155.2 423 30.7
Gohir.A03G087300 Gossypium hirsutum HOM05D003557 ORTHO05D001267 2.6e-32 144.1 380 33.7
Medtr3g095960 Medicago truncatula HOM05D003557 ORTHO05D001267 1.3e-31 141.7 585 25.6
COL.COLO4_14021 Corchorus olitorius HOM05D003557 ORTHO05D001267 1.7e-31 141.4 257 36.2
EL10Ac6g15275 Beta vulgaris HOM05D003557 ORTHO05D001267 3.7e-31 140.2 412 30.6
AUR62017914 Chenopodium quinoa HOM05D003557 ORTHO05D001267 3.2e-30 137.1 407 31.7
Lj2A603T36 Lonicera japonica HOM05D003557 ORTHO05D001267 3.5e-29 133.7 400 32.0
Eucgr.I00225 Eucalyptus grandis HOM05D003557 ORTHO05D001267 7.8e-29 132.5 304 35.2
Hund04477 Selenicereus undatus HOM05D003557 ORTHO05D001267 3.9e-28 130.2 338 34.0
Psat5g059960 Pisum sativum HOM05D003557 ORTHO05D001267 1.1e-27 128.6 471 27.0
Rhsim10G0136500 Rhododendron simsii HOM05D003557 ORTHO05D001267 3.6e-26 123.6 273 37.0
vmacro12862 Vaccinium macrocarpon HOM05D003557 ORTHO05D001267 4.7e-26 123.2 249 38.6
Rhsim10G0136700 Rhododendron simsii HOM05D003557 ORTHO05D001267 1.0e-25 122.1 272 37.1
Sc07g0001690 Simmondsia chinensis HOM05D003557 ORTHO05D001267 1.0e-25 122.1 323 36.2
Aqoxy5G02196 Aquilegia oxysepala HOM05D003557 ORTHO05D001267 1.8e-25 121.3 409 35.5
MBI03_g11313_MAGBIO Magnolia biondii HOM05D003557 ORTHO05D001267 2.9e-23 114.0 424 28.1
Gohir.D02G108001 Gossypium hirsutum HOM05D003557 ORTHO05D001267 1.1e-22 112.1 198 34.8
THA.LOC104821178 Tarenaya hassleriana HOM05D003557 ORTHO05D001267 3.2e-22 110.5 352 31.0
Ah.03g146750 Amaranthus hybridus HOM05D003557 ORTHO05D001267 4.1e-22 110.2 419 29.6
Gohir.D11G229640 Gossypium hirsutum HOM05D003557 ORTHO05D001267 2.3e-20 104.4 211 38.4
Sed0009753 Sechium edule HOM05D003557 ORTHO05D001267 2.1e-18 97.8 187 37.4
Aa31LG10G5030 Aethionema arabicum HOM05D003557 ORTHO05D001267 1.1e-17 95.5 350 31.7
Dinv25812 Davidia involucrata HOM05D003557 ORTHO05D001267 1.1e-17 95.5 230 32.6
PSO063G0467 Papaver somniferum HOM05D003557 ORTHO05D001267 1.1e-17 95.5 402 28.6
GSVIVG01010035001 Vitis vinifera HOM05D003557 ORTHO05D001267 3.1e-17 94.0 357 32.5
PSO782G0500 Papaver somniferum HOM05D003557 ORTHO05D001267 2.6e-16 90.9 404 28.0
Glyma.05G190500 Glycine max HOM05D003557 ORTHO05D001267 1.4e-14 85.1 250 30.8
DCAR_010881 Daucus carota HOM05D003557 ORTHO05D001267 9.2e-14 82.4 181 33.7
Actinidia03451 Actinidia chinensis HOM05D003557 ORTHO05D001267 2.7e-13 80.9 321 33.3
Sp1g35790 Schrenkiella parvula HOM05D003557 ORTHO05D001267 7.8e-13 79.3 379 28.5
MBI06_g18871_MAGBIO Magnolia biondii HOM05D003557 ORTHO05D001267 3.9e-12 77.0 326 28.2
CARHR038870 Cardamine hirsuta HOM05D003557 ORTHO05D001267 8.6e-12 75.9 361 31.0
VMungo1309G1084 Vigna mungo HOM05D003557 ORTHO05D001267 2.5e-11 74.3 69 58.0
AL1G55670 Arabidopsis lyrata HOM05D003557 ORTHO05D001267 3.3e-11 73.9 373 30.6
Actinidia36911 Actinidia chinensis HOM05D003557 ORTHO05D001267 2.1e-10 71.2 308 29.5
ATR1136G179 Amborella trichopoda HOM05D003557 ORTHO05D001267 6.2e-10 69.7 265 28.3
BcaB07g33709 Brassica carinata HOM05D003557 ORTHO05D001267 6.2e-10 69.7 376 28.2
Carub.0001s3802 Capsella rubella HOM05D003557 ORTHO05D001267 8.1e-10 69.3 373 27.3
Nitab4.5_0005978g0020 Nicotiana tabacum HOM05D003557 ORTHO05D001267 1.8e-09 68.2 225 28.0
Sp3g16710 Schrenkiella parvula HOM05D003557 ORTHO05D001267 1.8e-09 68.2 364 27.7
AT3G18640 Arabidopsis thaliana HOM05D003557 ORTHO05D001267 2.3e-09 67.8 195 33.3
Nitab4.5_0000299g0110 Nicotiana tabacum HOM05D003557 ORTHO05D001267 2.3e-09 67.8 222 28.4
CSS0006899 Camellia sinensis var. sinensis HOM05D003557 ORTHO05D001267 4.0e-09 67.0 386 29.8
AL3G31950 Arabidopsis lyrata HOM05D003557 ORTHO05D001267 5.2e-09 66.6 367 29.2
CAN.G744.17 Capsicum annuum HOM05D003557 ORTHO05D001267 5.2e-09 66.6 225 28.0
PGSC0003DMG400024801 Solanum tuberosum HOM05D003557 ORTHO05D001267 1.5e-08 65.1 225 27.1
DCAR_000420 Daucus carota HOM05D003557 ORTHO05D001267 7.6e-08 62.8 145 37.2
Migut.C01037 Erythranthe guttata HOM05D003557 ORTHO05D001267 7.6e-08 62.8 151 32.5
MSTRG.1373 Avicennia marina HOM05D003557 ORTHO05D001267 1.7e-07 61.6 211 29.4
BcaB04g20760 Brassica carinata HOM05D003557 ORTHO05D001267 2.4e-06 57.8 358 26.0
Peaxi162Scf00263g00317 Petunia axillaris HOM05D003557 ORTHO05D001267 7.1e-06 56.2 225 26.7
BcaC08g43085 Brassica carinata HOM05D003557 ORTHO05D001267 9.2e-06 55.8 353 25.2


User provided reference genes

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