Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr4.660 Acer truncatum HOM05D006696 ORTHO05D030753 3.6e-73 278.1 135 100.0
Atru.chr5.281 Acer truncatum HOM05D006696 ORTHO05D008683 3.2e-61 238.4 133 87.2
Ciclev10019231m.g Citrus clementina HOM05D006696 ORTHO05D008683 2.5e-50 202.2 133 69.9
Haze_16792 Corylus avellana HOM05D006696 ORTHO05D008683 5.8e-47 191.0 132 63.6
MD07G1119000 Malus domestica HOM05D006696 ORTHO05D008683 7.5e-47 190.7 133 61.7
Prupe.2G142200 Prunus persica HOM05D006696 ORTHO05D008683 1.3e-46 189.9 132 62.1
Thecc.08G173400 Theobroma cacao HOM05D006696 ORTHO05D008683 2.9e-46 188.7 134 63.4
TWI14G1225 Tripterygium wilfordii HOM05D006696 ORTHO05D008683 8.3e-46 187.2 132 63.6
COL.COLO4_24599 Corchorus olitorius HOM05D006696 ORTHO05D008683 1.4e-45 186.4 134 61.9
Hma1.2p1_0301F.1_g118560 Hydrangea macrophylla HOM05D006696 ORTHO05D008683 1.4e-45 186.4 133 63.9
Actinidia33475 Actinidia chinensis HOM05D006696 ORTHO05D008683 3.2e-45 185.3 132 61.4
Gohir.A13G117300 Gossypium hirsutum HOM05D006696 ORTHO05D008683 5.4e-45 184.5 134 61.9
CSS0014714 Camellia sinensis var. sinensis HOM05D006696 ORTHO05D008683 1.2e-44 183.3 132 63.6
HanXRQChr03g0093971 Helianthus annuus HOM05D006696 ORTHO05D008683 1.6e-44 183.0 132 61.4
Gohir.D13G120600 Gossypium hirsutum HOM05D006696 ORTHO05D008683 2.1e-44 182.6 134 61.9
Phvul.010G081400 Phaseolus vulgaris HOM05D006696 ORTHO05D008683 2.7e-44 182.2 132 59.8
Potri.002G146100 Populus trichocarpa HOM05D006696 ORTHO05D008683 3.5e-44 181.8 132 60.6
Gorai.013G134800 Gossypium raimondii HOM05D006696 ORTHO05D008683 4.6e-44 181.4 134 61.2
Medtr4g025130 Medicago truncatula HOM05D006696 ORTHO05D008683 7.8e-44 180.6 133 61.7
vmacro21023 Vaccinium macrocarpon HOM05D006696 ORTHO05D008683 7.8e-44 180.6 132 60.6
RcHm_v2.0_Chr1g0349711 Rosa chinensis HOM05D006696 ORTHO05D008683 1.0e-43 180.3 132 59.1
TAR629G0060 Trochodendron aralioides HOM05D006696 ORTHO05D008683 1.0e-43 180.3 132 62.9
Sopen01g036880 Solanum pennellii HOM05D006696 ORTHO05D008683 1.3e-43 179.9 133 60.2
Nitab4.5_0010616g0010 Nicotiana tabacum HOM05D006696 ORTHO05D008683 1.7e-43 179.5 133 60.2
Sabra02G0113800 Salix brachista HOM05D006696 ORTHO05D008683 2.3e-43 179.1 132 60.6
CSS0026641 Camellia sinensis var. sinensis HOM05D006696 ORTHO05D008683 3.0e-43 178.7 132 62.1
Lj3g0014279 Lotus japonicus HOM05D006696 ORTHO05D008683 3.0e-43 178.7 133 60.9
SalBow5G3816 Salvia bowleyana HOM05D006696 ORTHO05D008683 3.0e-43 178.7 133 57.9
Glyma.03G028100 Glycine max HOM05D006696 ORTHO05D008683 3.9e-43 178.3 133 58.6
EL10Ac1g00866 Beta vulgaris HOM05D006696 ORTHO05D008683 5.1e-43 177.9 134 60.4
Cc02_g24120 Coffea canephora HOM05D006696 ORTHO05D008683 5.1e-43 177.9 133 60.9
QL08p052869 Quercus lobata HOM05D006696 ORTHO05D008683 6.6e-43 177.6 133 60.9
PGSC0003DMG400025962 Solanum tuberosum HOM05D006696 ORTHO05D008683 6.6e-43 177.6 133 60.2
Psat7g231000 Pisum sativum HOM05D006696 ORTHO05D008683 8.6e-43 177.2 133 59.4
Eucgr.D02468 Eucalyptus grandis HOM05D006696 ORTHO05D008683 1.9e-42 176.0 133 58.6
Nitab4.5_0000457g0140 Nicotiana tabacum HOM05D006696 ORTHO05D008683 2.5e-42 175.6 133 58.6
VMungo0331G0021 Vigna mungo HOM05D006696 ORTHO05D008683 2.5e-42 175.6 134 56.7
Ca_19926_v3 Cicer arietinum L. HOM05D006696 ORTHO05D008683 3.3e-42 175.3 133 60.2
Lj7C531T6 Lonicera japonica HOM05D006696 ORTHO05D008683 3.3e-42 175.3 133 60.2
Cpa.g.sc611.2 Carica papaya HOM05D006696 ORTHO05D008683 4.3e-42 174.9 127 59.1
Lsat_1_v5_gn_3_132380 Lactuca sativa HOM05D006696 ORTHO05D008683 4.3e-42 174.9 128 59.4
Rhsim01G0149400 Rhododendron simsii HOM05D006696 ORTHO05D008683 5.6e-42 174.5 132 59.1
Solyc01g091130.4 Solanum lycopersicum HOM05D006696 ORTHO05D008683 5.6e-42 174.5 133 59.4
Lalb_Chr07g0189961 Lupinus albus HOM05D006696 ORTHO05D008683 9.5e-42 173.7 133 57.9
ECA232G1408 Erigeron canadensis HOM05D006696 ORTHO05D008683 1.2e-41 173.3 136 57.4
MELO3C006203.2 Cucumis melo HOM05D006696 ORTHO05D008683 2.1e-41 172.6 132 59.1
Peaxi162Scf00013g03019 Petunia axillaris HOM05D006696 ORTHO05D008683 2.1e-41 172.6 134 59.0
CsaV3_3G009820 Cucumis sativus L. HOM05D006696 ORTHO05D008683 3.6e-41 171.8 132 59.1
ClCG05G002380 Citrullus lanatus HOM05D006696 ORTHO05D008683 4.7e-41 171.4 132 59.1
MSTRG.20736 Avicennia marina HOM05D006696 ORTHO05D008683 6.2e-41 171.0 132 57.6
Nn6g34076 Nelumbo nucifera HOM05D006696 ORTHO05D008683 6.2e-41 171.0 133 61.7
AUR62004189 Chenopodium quinoa HOM05D006696 ORTHO05D008683 8.1e-41 170.6 134 59.7
TPR.G7586 Trifolium pratense HOM05D006696 ORTHO05D008683 8.1e-41 170.6 135 60.7
CiPaw.01G264000 Carya illinoinensis HOM05D006696 ORTHO05D008683 1.1e-40 170.2 133 58.6
CAN.G388.34 Capsicum annuum HOM05D006696 ORTHO05D008683 1.8e-40 169.5 133 57.9
Manes.01G267400 Manihot esculenta HOM05D006696 ORTHO05D008683 2.3e-40 169.1 131 58.0
THA.LOC104814083 Tarenaya hassleriana HOM05D006696 ORTHO05D008683 2.3e-40 169.1 133 56.4
Aqoxy7G00691 Aquilegia oxysepala HOM05D006696 ORTHO05D008683 3.1e-40 168.7 132 59.8
SGA_v2.0_scaffold581G53050 Striga asiatica HOM05D006696 ORTHO05D008683 5.2e-40 167.9 133 57.9
Aa31LG1G11340 Aethionema arabicum HOM05D006696 ORTHO05D008683 8.9e-40 167.2 132 57.6
Sed0011228 Sechium edule HOM05D006696 ORTHO05D008683 1.2e-39 166.8 132 55.3
Sc26g0001290 Simmondsia chinensis HOM05D006696 ORTHO05D008683 1.2e-39 166.8 133 54.9
arahy.Tifrunner.gnm1.ann1.PBYD8I Arachis hypogaea HOM05D006696 ORTHO05D008683 1.5e-39 166.4 133 58.6
Hund27369 Selenicereus undatus HOM05D006696 ORTHO05D008683 1.5e-39 166.4 133 57.1
arahy.Tifrunner.gnm1.ann1.30BUB6 Arachis hypogaea HOM05D006696 ORTHO05D008683 2.6e-39 165.6 133 58.6
Ah.05g174590 Amaranthus hybridus HOM05D006696 ORTHO05D008683 5.8e-39 164.5 134 56.0
SGA_v2.0_scaffold95G28911 Striga asiatica HOM05D006696 ORTHO05D008683 4.9e-38 161.4 133 55.6
unitig_22.g5383 Utricularia gibba HOM05D006696 ORTHO05D008683 1.9e-37 159.5 133 54.9
DCAR_015916 Daucus carota HOM05D006696 ORTHO05D008683 2.3e-35 152.5 133 51.9
FvH4_7g11430 Fragaria vesca HOM05D006696 ORTHO05D008683 8.6e-35 150.6 132 49.2
PSO478G1798 Papaver somniferum HOM05D006696 ORTHO05D008683 8.6e-35 150.6 133 59.4
FAN06G3694 Fragaria x ananassa HOM05D006696 ORTHO05D008683 1.1e-34 150.2 132 49.2
PSO782G1103 Papaver somniferum HOM05D006696 ORTHO05D008683 1.1e-34 150.2 133 58.6
FAN01G1519 Fragaria x ananassa HOM05D006696 ORTHO05D008683 3.3e-34 148.7 132 48.5
FAN06G1977 Fragaria x ananassa HOM05D006696 ORTHO05D008683 3.3e-34 148.7 132 48.5
MBI12_g20403_MAGBIO Magnolia biondii HOM05D006696 ORTHO05D008683 4.3e-34 148.3 126 55.6
GSVIVG01027661001 Vitis vinifera HOM05D006696 ORTHO05D008683 4.3e-34 148.3 133 51.1
Migut.B01614 Erythranthe guttata HOM05D006696 ORTHO05D008683 4.7e-33 144.8 134 50.0
FAN03G1153 Fragaria x ananassa HOM05D006696 ORTHO05D008683 3.1e-32 142.1 132 48.5
CARHR000330 Cardamine hirsuta HOM05D006696 ORTHO05D008683 3.2e-29 132.1 136 46.3
AL1G10260 Arabidopsis lyrata HOM05D006696 ORTHO05D008683 1.6e-28 129.8 114 52.6
Carub.0001s0021 Capsella rubella HOM05D006696 ORTHO05D008683 2.7e-28 129.0 134 48.5
Duzib177G0277 Durio zibethinus HOM05D006696 ORTHO05D008683 1.7e-27 126.3 134 47.0
Sp1g37340 Schrenkiella parvula HOM05D006696 ORTHO05D008683 2.3e-27 125.9 140 51.4
CDE04G1815 Ceratophyllum demersum HOM05D006696 ORTHO05D008683 1.9e-26 122.9 133 45.1
BcaB07g33486 Brassica carinata HOM05D006696 ORTHO05D008683 2.5e-26 122.5 138 48.6
HPP92_022287 Vanilla planifolia HOM05D006696 ORTHO05D008683 2.5e-26 122.5 136 39.7
AT1G02020 Arabidopsis thaliana HOM05D006696 ORTHO05D008683 1.3e-25 120.2 133 45.1
Thhalv10007140m.g Eutrema salsugineum HOM05D006696 ORTHO05D008683 8.1e-25 117.5 122 50.0
C06p05680 Brassica napus HOM05D006696 ORTHO05D008683 1.1e-24 117.1 139 47.5
ATR0041G020 Amborella trichopoda HOM05D006696 ORTHO05D008683 6.9e-24 114.4 134 42.5
BcaC08g43220 Brassica carinata HOM05D006696 ORTHO05D008683 1.7e-22 109.8 141 46.1
BolC6t35679H Brassica oleracea HOM05D006696 ORTHO05D008683 1.7e-22 109.8 141 46.1
A06p03080 Brassica napus HOM05D006696 ORTHO05D008683 6.4e-22 107.8 140 47.1
BraA06t23521Z Brassica rapa HOM05D006696 ORTHO05D008683 2.7e-20 102.4 137 43.8
SEGI_31859 Sequoiadendron giganteum HOM05D006696 ORTHO05D008683 2.7e-20 102.4 149 36.9
Zm00001eb145800 Zea mays HOM05D006696 ORTHO05D008683 7.4e-18 94.4 115 39.1
Os10g0190800 Oryza sativa ssp. japonica HOM05D006696 ORTHO05D008683 1.6e-17 93.2 114 40.4
AUR62013656 Chenopodium quinoa HOM05D006696 ORTHO05D008683 1.4e-16 90.1 114 40.4
Solyc01g091140.4 Solanum lycopersicum HOM05D006696 ORTHO05D008683 6.9e-16 87.8 66 57.6
SMO011G0006 Selaginella moellendorffii HOM05D006696 ORTHO05D008683 1.7e-14 83.2 113 39.8
Atru.chr4.903 Acer truncatum HOM05D006696 ORTHO05D030753 1.1e-13 80.5 42 85.7
Pp3c18_8320 Physcomitrium patens HOM05D006696 ORTHO05D008683 5.1e-11 71.6 113 33.6
Mapoly0117s0009 Marchantia polymorpha HOM05D006696 ORTHO05D008683 6.7e-11 71.2 122 36.1
AagrBONN_evm.TU.Sc2ySwM_228.1723 Anthoceros agrestis HOM05D006696 ORTHO05D008683 5.3e-08 61.6 117 35.0


User provided reference genes

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