Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr4.3201 Acer truncatum HOM05D002599 ORTHO05D001895 6.8e-63 243.8 123 100.0
Atru.chr4.3202 Acer truncatum HOM05D002599 ORTHO05D001895 6.8e-63 243.8 123 100.0
Atru.chr4.3203 Acer truncatum HOM05D002599 ORTHO05D001895 3.3e-49 198.4 100 99.0
Thecc.02G018800 Theobroma cacao HOM05D002599 ORTHO05D001895 4.2e-12 75.1 106 40.6
Thecc.02G024800 Theobroma cacao HOM05D002599 ORTHO05D001895 1.6e-11 73.2 106 42.5
COL.COLO4_29046 Corchorus olitorius HOM05D002599 ORTHO05D001895 2.1e-11 72.8 88 43.2
Gohir.A01G182500 Gossypium hirsutum HOM05D002599 ORTHO05D001895 2.7e-11 72.4 108 39.8
Potri.015G016100 Populus trichocarpa HOM05D002599 ORTHO05D001895 2.7e-11 72.4 98 36.7
COL.COLO4_25714 Corchorus olitorius HOM05D002599 ORTHO05D001895 3.6e-11 72.0 101 37.6
Gohir.D02G236400 Gossypium hirsutum HOM05D002599 ORTHO05D001895 6.1e-11 71.2 102 34.3
Gorai.005G264500 Gossypium raimondii HOM05D002599 ORTHO05D001895 6.1e-11 71.2 102 34.3
Prupe.8G119000 Prunus persica HOM05D018000 ORTHO05D017022 6.1e-11 71.2 98 36.7
COL.COLO4_25716 Corchorus olitorius HOM05D002599 ORTHO05D001895 7.9e-11 70.9 106 40.6
Potri.004G219700 Populus trichocarpa HOM05D002599 ORTHO05D001895 1.0e-10 70.5 106 37.7
Potri.012G013700 Populus trichocarpa HOM05D002599 ORTHO05D001895 1.0e-10 70.5 121 35.5
Potri.015G126301 Populus trichocarpa HOM05D002599 ORTHO05D001895 1.0e-10 70.5 101 37.6
Gohir.A01G182400 Gossypium hirsutum HOM05D002599 ORTHO05D001895 1.8e-10 69.7 108 38.9
Sabra03G0006900 Salix brachista HOM05D009888 ORTHO05D001895 1.8e-10 69.7 117 32.5
Gohir.A02G159400 Gossypium hirsutum HOM05D002599 ORTHO05D001895 2.3e-10 69.3 105 38.1
Manes.10G124600 Manihot esculenta HOM05D002599 ORTHO05D001895 2.3e-10 69.3 103 34.0
Thecc.10G017900 Theobroma cacao HOM05D002599 ORTHO05D001895 2.3e-10 69.3 91 41.8
Thecc.04G012700 Theobroma cacao HOM05D002599 ORTHO05D001895 3.0e-10 68.9 92 38.0
Gohir.A03G214900 Gossypium hirsutum HOM05D002599 ORTHO05D001895 3.9e-10 68.6 103 35.9
Sabra15G0013000 Salix brachista HOM05D002599 ORTHO05D001895 3.9e-10 68.6 97 37.1
TWI75G1004 Tripterygium wilfordii HOM05D002599 ORTHO05D001895 3.9e-10 68.6 99 42.4
Prupe.1G574400 Prunus persica HOM05D002599 ORTHO05D001895 5.1e-10 68.2 103 36.9
Thecc.01G060200 Theobroma cacao HOM05D002599 ORTHO05D001895 6.7e-10 67.8 94 43.6
Thecc.02G023500 Theobroma cacao HOM05D002599 ORTHO05D001895 6.7e-10 67.8 108 35.2
Potri.003G021250 Populus trichocarpa HOM05D009888 ORTHO05D001895 8.8e-10 67.4 115 30.4
Sabra09G0045600 Salix brachista HOM05D008886 ORTHO05D001895 8.8e-10 67.4 102 39.2
COL.COLO4_29044 Corchorus olitorius HOM05D002599 ORTHO05D001895 1.1e-09 67.0 93 41.9
Gorai.012G168100 Gossypium raimondii HOM05D002599 ORTHO05D036187 1.1e-09 67.0 102 34.3
Sabra15G0012300 Salix brachista HOM05D002599 ORTHO05D001895 1.1e-09 67.0 97 36.1
Gohir.D03G021100 Gossypium hirsutum HOM05D002599 ORTHO05D001895 1.5e-09 66.6 93 39.8
Gorai.002G215500 Gossypium raimondii HOM05D002599 ORTHO05D001895 1.5e-09 66.6 108 37.0
Gorai.003G022700 Gossypium raimondii HOM05D002599 ORTHO05D001895 1.5e-09 66.6 93 39.8
Potri.011G005200 Populus trichocarpa HOM05D008886 ORTHO05D001895 1.5e-09 66.6 103 37.9
Sabra03G0007700 Salix brachista HOM05D009888 ORTHO05D001895 1.5e-09 66.6 88 36.4
Sabra15G0012400 Salix brachista HOM05D002599 ORTHO05D001895 1.5e-09 66.6 97 36.1
Potri.004G219800 Populus trichocarpa HOM05D002599 ORTHO05D001895 2.0e-09 66.2 105 37.1
Gohir.D04G176526 Gossypium hirsutum HOM05D002599 ORTHO05D001895 2.6e-09 65.9 102 34.3
Potri.015G016000 Populus trichocarpa HOM05D002599 ORTHO05D001895 2.6e-09 65.9 95 35.8
Thecc.10G017500 Theobroma cacao HOM05D002599 ORTHO05D001895 2.6e-09 65.9 91 39.6
Gohir.A04G133251 Gossypium hirsutum HOM05D002599 ORTHO05D001895 3.3e-09 65.5 117 33.3
Gohir.D04G176456 Gossypium hirsutum HOM05D002599 ORTHO05D036100 3.3e-09 65.5 117 33.3
Gorai.011G111100 Gossypium raimondii HOM05D002599 ORTHO05D001895 3.3e-09 65.5 105 35.2
Potri.003G014750 Populus trichocarpa HOM05D009888 ORTHO05D001895 3.3e-09 65.5 88 35.2
Potri.015G015800 Populus trichocarpa HOM05D002599 ORTHO05D001895 3.3e-09 65.5 90 38.9
Sabra03G0006600 Salix brachista HOM05D009888 ORTHO05D001895 3.3e-09 65.5 88 35.2
Sabra15G0012200 Salix brachista HOM05D002599 ORTHO05D001895 3.3e-09 65.5 97 35.1
Gorai.012G168500 Gossypium raimondii HOM05D002599 ORTHO05D036100 4.4e-09 65.1 117 33.3
Manes.07G021000 Manihot esculenta HOM05D016843 ORTHO05D001895 4.4e-09 65.1 88 35.2
Potri.003G013026 Populus trichocarpa HOM05D009888 ORTHO05D001895 4.4e-09 65.1 115 28.7
Potri.004G219900 Populus trichocarpa HOM05D002599 ORTHO05D001895 4.4e-09 65.1 104 36.5
Thecc.02G021800 Theobroma cacao HOM05D002599 ORTHO05D012670 4.4e-09 65.1 113 32.7
COL.COLO4_17739 Corchorus olitorius HOM05D002599 ORTHO05D001895 7.4e-09 64.3 121 38.0
Gohir.D10G101400 Gossypium hirsutum HOM05D002599 ORTHO05D001895 7.4e-09 64.3 105 35.2
Potri.011G005601 Populus trichocarpa HOM05D008886 ORTHO05D001895 7.4e-09 64.3 103 35.0
COL.COLO4_17588 Corchorus olitorius HOM05D002599 ORTHO05D001895 9.7e-09 63.9 117 36.8
Gohir.A13G015300 Gossypium hirsutum HOM05D002599 ORTHO05D001895 9.7e-09 63.9 99 36.4
Gohir.D13G016500 Gossypium hirsutum HOM05D002599 ORTHO05D001895 9.7e-09 63.9 99 36.4
Gorai.013G018200 Gossypium raimondii HOM05D002599 ORTHO05D001895 9.7e-09 63.9 99 36.4
Sabra01G0167000 Salix brachista HOM05D008353 ORTHO05D001895 9.7e-09 63.9 107 39.3
Potri.011G004900 Populus trichocarpa HOM05D008886 ORTHO05D001895 1.3e-08 63.5 100 33.0
Prupe.8G118100 Prunus persica HOM05D018000 ORTHO05D017022 1.3e-08 63.5 98 34.7
Sabra11G0004900 Salix brachista HOM05D008886 ORTHO05D001895 1.3e-08 63.5 103 36.9
Duzib147G0900 Durio zibethinus HOM05D002599 ORTHO05D001895 1.7e-08 63.2 96 33.3
Manes.07G020500 Manihot esculenta HOM05D016843 ORTHO05D001895 1.7e-08 63.2 101 32.7
Manes.07G020550 Manihot esculenta HOM05D016843 ORTHO05D001895 1.7e-08 63.2 101 32.7
COL.COLO4_17754 Corchorus olitorius HOM05D002599 ORTHO05D001895 2.2e-08 62.8 100 35.0
Gohir.A04G133025 Gossypium hirsutum HOM05D002599 ORTHO05D001895 2.2e-08 62.8 116 32.8
Potri.004G221300 Populus trichocarpa HOM05D008886 ORTHO05D001895 2.2e-08 62.8 106 36.8
Sabra11G0004500 Salix brachista HOM05D008886 ORTHO05D001895 2.2e-08 62.8 103 35.9
Thecc.02G092200 Theobroma cacao HOM05D002599 ORTHO05D001895 2.2e-08 62.8 99 34.3
Gohir.A04G132600 Gossypium hirsutum HOM05D002599 ORTHO05D012670 2.8e-08 62.4 102 32.4
Gohir.D04G176540 Gossypium hirsutum HOM05D002599 ORTHO05D036100 2.8e-08 62.4 117 32.5
Sabra11G0004200 Salix brachista HOM05D008886 ORTHO05D001895 2.8e-08 62.4 103 35.9
Sabra11G0005300 Salix brachista HOM05D008886 ORTHO05D001895 2.8e-08 62.4 103 35.9
Thecc.02G091000 Theobroma cacao HOM05D002599 ORTHO05D001895 2.8e-08 62.4 104 34.6
Potri.012G013000 Populus trichocarpa HOM05D002599 ORTHO05D001895 3.7e-08 62.0 91 36.3
Sabra11G0004000 Salix brachista HOM05D008886 ORTHO05D001895 3.7e-08 62.0 103 35.9
Sabra11G0004600 Salix brachista HOM05D008886 ORTHO05D001895 3.7e-08 62.0 103 35.9
Thecc.02G022700 Theobroma cacao HOM05D002599 ORTHO05D012670 3.7e-08 62.0 113 31.0
Thecc.02G091100 Theobroma cacao HOM05D002599 ORTHO05D001895 3.7e-08 62.0 115 32.2
Thecc.05G107200 Theobroma cacao HOM05D002599 ORTHO05D025152 3.7e-08 62.0 109 33.9
Sabra11G0004300 Salix brachista HOM05D008886 ORTHO05D001895 4.8e-08 61.6 103 35.9
Sabra15G0012600 Salix brachista HOM05D002599 ORTHO05D001895 4.8e-08 61.6 89 33.7
Gohir.A04G133401 Gossypium hirsutum HOM05D002599 ORTHO05D001895 6.3e-08 61.2 117 32.5
Gohir.D04G176428 Gossypium hirsutum HOM05D002599 ORTHO05D036187 6.3e-08 61.2 102 33.3
Gorai.012G168400 Gossypium raimondii HOM05D002599 ORTHO05D036187 6.3e-08 61.2 102 33.3
Manes.10G120000 Manihot esculenta HOM05D002599 ORTHO05D001895 6.3e-08 61.2 102 31.4
Potri.007G119400 Populus trichocarpa HOM05D008886 ORTHO05D001895 6.3e-08 61.2 99 34.3
Potri.012G013501 Populus trichocarpa HOM05D002599 ORTHO05D001895 6.3e-08 61.2 119 31.9
Sabra03G0006400 Salix brachista HOM05D002599 ORTHO05D001895 6.3e-08 61.2 102 36.3
Sabra11G0004400 Salix brachista HOM05D008886 ORTHO05D001895 6.3e-08 61.2 103 35.0
Sabra11G0005100 Salix brachista HOM05D008886 ORTHO05D001895 6.3e-08 61.2 103 35.0
Ciclev10003852m.g Citrus clementina HOM05D022543 ORTHO05D001895 8.2e-08 60.8 93 35.5
Gohir.A10G235900 Gossypium hirsutum HOM05D002599 ORTHO05D001895 8.2e-08 60.8 105 33.3
Potri.011G005300 Populus trichocarpa HOM05D008886 ORTHO05D001895 8.2e-08 60.8 103 33.0
Potri.015G015650 Populus trichocarpa HOM05D002599 ORTHO05D001895 8.2e-08 60.8 91 37.4
Sabra11G0004700 Salix brachista HOM05D008886 ORTHO05D001895 8.2e-08 60.8 103 35.0
Sabra11G0005000 Salix brachista HOM05D008886 ORTHO05D001895 8.2e-08 60.8 103 35.0
Gohir.A01G200500 Gossypium hirsutum HOM05D002599 ORTHO05D025152 1.1e-07 60.5 108 35.2
Thecc.02G027800 Theobroma cacao HOM05D002599 ORTHO05D001895 1.1e-07 60.5 108 33.3
FAN08G1263 Fragaria x ananassa HOM05D018000 ORTHO05D017022 1.4e-07 60.1 101 33.7
Gohir.A04G130700 Gossypium hirsutum HOM05D002599 ORTHO05D001895 1.4e-07 60.1 101 31.7
Gorai.012G167300 Gossypium raimondii HOM05D002599 ORTHO05D001895 1.4e-07 60.1 101 31.7
Potri.003G011066 Populus trichocarpa HOM05D002599 ORTHO05D001895 1.4e-07 60.1 84 36.9
Potri.003G011132 Populus trichocarpa HOM05D002599 ORTHO05D001895 1.4e-07 60.1 85 36.5
Potri.012G012950 Populus trichocarpa HOM05D002599 ORTHO05D001895 1.4e-07 60.1 90 34.4
Sabra11G0004100 Salix brachista HOM05D008886 ORTHO05D001895 1.4e-07 60.1 103 35.9
Sabra15G0012000 Salix brachista HOM05D002599 ORTHO05D001895 1.4e-07 60.1 94 34.0
Gohir.D04G176200 Gossypium hirsutum HOM05D002599 ORTHO05D012670 1.8e-07 59.7 108 30.6
Sabra07G0096600 Salix brachista HOM05D000527 ORTHO05D017379 1.8e-07 59.7 99 35.4
Sabra11G0005400 Salix brachista HOM05D008886 ORTHO05D001895 1.8e-07 59.7 103 34.0
Thecc.02G022200 Theobroma cacao HOM05D002599 ORTHO05D012670 1.8e-07 59.7 102 33.3
Gohir.D04G176554 Gossypium hirsutum HOM05D002599 ORTHO05D001895 2.4e-07 59.3 105 33.3
Potri.011G005500 Populus trichocarpa HOM05D008886 ORTHO05D001895 2.4e-07 59.3 100 33.0
Potri.011G006050 Populus trichocarpa HOM05D008886 ORTHO05D001895 2.4e-07 59.3 103 31.1
Sabra01G0167400 Salix brachista HOM05D008886 ORTHO05D001895 2.4e-07 59.3 88 39.8
Sabra07G0096500 Salix brachista HOM05D008886 ORTHO05D001895 2.4e-07 59.3 99 35.4
Thecc.02G022600 Theobroma cacao HOM05D002599 ORTHO05D012670 2.4e-07 59.3 113 29.2
TWI14G1236 Tripterygium wilfordii HOM05D002599 ORTHO05D001895 2.4e-07 59.3 107 37.4
Duzib187G0682 Durio zibethinus HOM05D002599 ORTHO05D001895 3.1e-07 58.9 94 39.4
Manes.10G126000 Manihot esculenta HOM05D016843 ORTHO05D001895 3.1e-07 58.9 99 33.3
Potri.015G015275 Populus trichocarpa HOM05D002599 ORTHO05D001895 3.1e-07 58.9 91 36.3
Sabra07G0096900 Salix brachista HOM05D008886 ORTHO05D001895 3.1e-07 58.9 99 35.4
Sabra15G0012500 Salix brachista HOM05D002599 ORTHO05D001895 3.1e-07 58.9 91 35.2
Thecc.02G026200 Theobroma cacao HOM05D002599 ORTHO05D001895 3.1e-07 58.9 102 32.4
Gohir.D04G175900 Gossypium hirsutum HOM05D002599 ORTHO05D001895 4.1e-07 58.5 101 31.7
Potri.003G010700 Populus trichocarpa HOM05D002599 ORTHO05D001895 4.1e-07 58.5 84 36.9
Sabra01G0166800 Salix brachista HOM05D002599 ORTHO05D001895 4.1e-07 58.5 113 32.7
Sabra11G0005500 Salix brachista HOM05D008886 ORTHO05D001895 4.1e-07 58.5 103 33.0
Thecc.10G017400 Theobroma cacao HOM05D002599 ORTHO05D001895 4.1e-07 58.5 102 32.4
Gohir.D04G176568 Gossypium hirsutum HOM05D002599 ORTHO05D012670 5.3e-07 58.2 103 33.0
Gohir.A04G133650 Gossypium hirsutum HOM05D002599 ORTHO05D001895 7.0e-07 57.8 117 31.6
Sabra15G0012700 Salix brachista HOM05D002599 ORTHO05D001895 7.0e-07 57.8 85 36.5
Thecc.02G024100 Theobroma cacao HOM05D002599 ORTHO05D012670 7.0e-07 57.8 113 29.2
Gohir.D04G176470 Gossypium hirsutum HOM05D002599 ORTHO05D001895 9.1e-07 57.4 103 32.0
Potri.007G099100 Populus trichocarpa HOM05D002599 ORTHO05D001895 9.1e-07 57.4 117 34.2
Potri.012G012850 Populus trichocarpa HOM05D002599 ORTHO05D001895 9.1e-07 57.4 94 35.1
Sabra12G0018200 Salix brachista HOM05D002599 ORTHO05D001895 9.1e-07 57.4 90 32.2
Thecc.02G091300 Theobroma cacao HOM05D002599 ORTHO05D001895 9.1e-07 57.4 92 38.0
Ah.12g052760 Amaranthus hybridus HOM05D002599 ORTHO05D001895 1.2e-06 57.0 112 30.4
Manes.10G126200 Manihot esculenta HOM05D016843 ORTHO05D001895 1.2e-06 57.0 118 32.2
Sabra16G0267500 Salix brachista HOM05D008886 ORTHO05D001895 1.2e-06 57.0 86 38.4
Sabra16G0269300 Salix brachista HOM05D008886 ORTHO05D001895 1.2e-06 57.0 86 39.5
Thecc.02G091800 Theobroma cacao HOM05D008353 ORTHO05D001895 1.2e-06 57.0 106 31.1
Gohir.A12G043200 Gossypium hirsutum HOM05D002599 ORTHO05D001895 1.5e-06 56.6 105 34.3
Manes.07G017350 Manihot esculenta HOM05D016843 ORTHO05D001895 1.5e-06 56.6 83 33.7
Thecc.02G026300 Theobroma cacao HOM05D002599 ORTHO05D001895 1.5e-06 56.6 102 32.4
COL.COLO4_11745 Corchorus olitorius HOM05D002599 ORTHO05D001895 2.0e-06 56.2 89 37.1
Gorai.011G286700 Gossypium raimondii HOM05D002599 ORTHO05D001895 2.0e-06 56.2 91 34.1
Thecc.02G026400 Theobroma cacao HOM05D002599 ORTHO05D001895 2.0e-06 56.2 102 31.4
Gohir.A04G130718 Gossypium hirsutum HOM05D002599 ORTHO05D001895 2.6e-06 55.8 108 33.3
Gorai.012G167500 Gossypium raimondii HOM05D002599 ORTHO05D001895 2.6e-06 55.8 108 34.3
Potri.015G015501 Populus trichocarpa HOM05D002599 ORTHO05D001895 2.6e-06 55.8 90 35.6
Sabra15G0012900 Salix brachista HOM05D002599 ORTHO05D001895 2.6e-06 55.8 90 34.4
Atru.chr3.613 Acer truncatum HOM05D002599 ORTHO05D001895 3.4e-06 55.5 104 32.7
Gohir.A04G130712 Gossypium hirsutum HOM05D019153 ORTHO05D001895 3.4e-06 55.5 107 32.7
Gohir.D01G042900 Gossypium hirsutum HOM05D002599 ORTHO05D001895 3.4e-06 55.5 93 36.6
Gohir.D04G176066 Gossypium hirsutum HOM05D002599 ORTHO05D047328 3.4e-06 55.5 109 29.4
Gorai.002G061900 Gossypium raimondii HOM05D002599 ORTHO05D001895 3.4e-06 55.5 93 36.6
Gorai.012G167600 Gossypium raimondii HOM05D002599 ORTHO05D047328 3.4e-06 55.5 107 29.9
Gorai.012G167800 Gossypium raimondii HOM05D002599 ORTHO05D012670 3.4e-06 55.5 102 32.4
Potri.003G010763 Populus trichocarpa HOM05D008353 ORTHO05D001895 3.4e-06 55.5 108 31.5
Potri.004G221600 Populus trichocarpa HOM05D008886 ORTHO05D001895 3.4e-06 55.5 103 33.0
Potri.014G067900 Populus trichocarpa HOM05D002599 ORTHO05D001895 3.4e-06 55.5 120 31.7
Potri.015G014850 Populus trichocarpa HOM05D002599 ORTHO05D001895 3.4e-06 55.5 90 34.4
Thecc.02G024300 Theobroma cacao HOM05D002599 ORTHO05D012670 3.4e-06 55.5 102 30.4
AUR62019865 Chenopodium quinoa HOM05D002599 ORTHO05D001895 4.5e-06 55.1 82 39.0
COL.COLO4_17587 Corchorus olitorius HOM05D009888 ORTHO05D001895 4.5e-06 55.1 103 32.0
Thecc.10G017800 Theobroma cacao HOM05D002599 ORTHO05D001895 4.5e-06 55.1 102 31.4
Ciclev10003864m.g Citrus clementina HOM05D022543 ORTHO05D001895 5.9e-06 54.7 93 32.3
COL.COLO4_11449 Corchorus olitorius HOM05D006446 ORTHO05D007832 5.9e-06 54.7 107 37.4
Gohir.D12G042600 Gossypium hirsutum HOM05D002599 ORTHO05D001895 5.9e-06 54.7 104 33.7
Gorai.008G044600 Gossypium raimondii HOM05D002599 ORTHO05D001895 5.9e-06 54.7 104 33.7
Gorai.012G167400 Gossypium raimondii HOM05D019153 ORTHO05D047868 5.9e-06 54.7 106 32.1
Thecc.02G022300 Theobroma cacao HOM05D002599 ORTHO05D012670 5.9e-06 54.7 102 29.4
Prupe.1G574300 Prunus persica HOM05D002599 ORTHO05D001895 7.7e-06 54.3 97 32.0
Thecc.02G026500 Theobroma cacao HOM05D002599 ORTHO05D001895 7.7e-06 54.3 102 32.4


User provided reference genes

Program Settings