Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr4.3043 Acer truncatum HOM05D007925 ORTHO05D009727 1.9e-116 422.5 223 100.0
CiPaw.02G073300 Carya illinoinensis HOM05D007925 ORTHO05D009727 2.4e-37 159.8 225 47.1
Ciclev10005876m.g Citrus clementina HOM05D007925 ORTHO05D009727 5.2e-37 158.7 230 46.5
Cfa015292 Carpinus fangiana HOM05D007925 ORTHO05D009727 4.2e-34 149.1 225 46.7
QL12p029416 Quercus lobata HOM05D007925 ORTHO05D009727 3.5e-33 146.0 220 43.2
RcHm_v2.0_Chr4g0425771 Rosa chinensis HOM05D007925 ORTHO05D009727 7.8e-33 144.8 231 42.0
Dinv44272 Davidia involucrata HOM05D007925 ORTHO05D009727 8.7e-32 141.4 234 45.7
Prupe.1G115200 Prunus persica HOM05D007925 ORTHO05D009727 5.6e-31 138.7 231 43.3
Haze_01318 Corylus avellana HOM05D007925 ORTHO05D009727 2.1e-30 136.7 225 44.4
Manes.15G001100 Manihot esculenta HOM05D007925 ORTHO05D009727 5.3e-29 132.1 225 43.6
Thecc.04G303500 Theobroma cacao HOM05D007925 ORTHO05D009727 6.9e-29 131.7 209 45.0
Potri.012G102300 Populus trichocarpa HOM05D007925 ORTHO05D009727 4.5e-28 129.0 232 45.7
FvH4_4g20280 Fragaria vesca HOM05D007925 ORTHO05D009727 6.4e-27 125.2 224 38.8
FvH4_4g20350 Fragaria vesca HOM05D007925 ORTHO05D009727 6.4e-27 125.2 225 40.0
Actinidia18460 Actinidia chinensis HOM05D007925 ORTHO05D009727 9.3e-26 121.3 221 40.3
Gohir.A02G055200 Gossypium hirsutum HOM05D007925 ORTHO05D009727 9.3e-26 121.3 227 40.1
Sed0014435 Sechium edule HOM05D007925 ORTHO05D009727 9.3e-26 121.3 233 38.2
TWI09G1395 Tripterygium wilfordii HOM05D007925 ORTHO05D009727 1.6e-25 120.6 227 41.4
TAR633G0906 Trochodendron aralioides HOM05D007925 ORTHO05D009727 3.5e-25 119.4 203 40.4
ClCG06G004510 Citrullus lanatus HOM05D007925 ORTHO05D009727 4.6e-25 119.0 234 37.2
Haze_01320 Corylus avellana HOM05D007925 ORTHO05D009727 1.1e-23 114.4 186 45.7
Gohir.D02G060200 Gossypium hirsutum HOM05D007925 ORTHO05D009727 1.9e-23 113.6 227 38.8
CsaV3_6G028540 Cucumis sativus L. HOM05D007925 ORTHO05D009727 2.5e-23 113.2 233 36.5
Gorai.005G067800 Gossypium raimondii HOM05D007925 ORTHO05D009727 3.3e-23 112.8 227 38.8
Potri.008G103600 Populus trichocarpa HOM05D007925 ORTHO05D009727 5.6e-23 112.1 242 40.5
Rhsim04G0240400 Rhododendron simsii HOM05D007925 ORTHO05D009727 8.1e-22 108.2 232 38.8
COL.COLO4_34592 Corchorus olitorius HOM05D007925 ORTHO05D009727 6.9e-21 105.1 207 40.1
FAN07G0172 Fragaria x ananassa HOM05D007925 ORTHO05D009727 1.2e-20 104.4 140 44.3
TWI53G0957 Tripterygium wilfordii HOM05D007925 ORTHO05D009727 2.0e-20 103.6 227 37.4
Sabra12G0074900 Salix brachista HOM05D007925 ORTHO05D009727 1.3e-19 100.9 231 40.3
FAN12G1072 Fragaria x ananassa HOM05D007925 ORTHO05D009727 2.9e-19 99.8 224 35.3
MD16G1151500 Malus domestica HOM05D007925 ORTHO05D009727 3.8e-19 99.4 145 46.2
FvH4_4g20060 Fragaria vesca HOM05D007925 ORTHO05D009727 6.4e-19 98.6 169 40.8
Phvul.006G118800 Phaseolus vulgaris HOM05D007925 ORTHO05D009727 4.2e-18 95.9 230 31.7
AUR62039262 Chenopodium quinoa HOM05D007925 ORTHO05D009727 7.1e-18 95.1 214 36.0
Nn4g25550 Nelumbo nucifera HOM05D007925 ORTHO05D009727 2.1e-17 93.6 254 31.1
Glyma.09G034600 Glycine max HOM05D007925 ORTHO05D009727 7.9e-17 91.7 227 34.4
Nitab4.5_0007718g0010 Nicotiana tabacum HOM05D007925 ORTHO05D009727 1.8e-16 90.5 230 36.1
MD13G1151000 Malus domestica HOM05D007925 ORTHO05D009727 3.0e-16 89.7 145 41.4
Nitab4.5_0009429g0010 Nicotiana tabacum HOM05D007925 ORTHO05D009727 3.3e-15 86.3 230 35.7
Ah.13g071370 Amaranthus hybridus HOM05D007925 ORTHO05D009727 5.6e-15 85.5 209 33.5
Glyma.15G139300 Glycine max HOM05D007925 ORTHO05D009727 7.4e-15 85.1 228 32.5
Oeu063653.1 Olea europaea HOM05D007925 ORTHO05D009727 1.3e-14 84.3 235 35.3
MELO3C021261.2 Cucumis melo HOM05D007925 ORTHO05D009727 2.1e-14 83.6 216 34.3
Solyc03g093980.2 Solanum lycopersicum HOM05D007925 ORTHO05D009727 2.1e-14 83.6 241 35.3
AUR62016227 Chenopodium quinoa HOM05D007925 ORTHO05D009727 3.7e-14 82.8 176 39.2
Sopen03g024830 Solanum pennellii HOM05D007925 ORTHO05D009727 3.7e-14 82.8 241 34.9
PGSC0003DMG400008341 Solanum tuberosum HOM05D007925 ORTHO05D009727 3.7e-14 82.8 205 35.6
VMungo0540G0187 Vigna mungo HOM05D007925 ORTHO05D009727 3.7e-14 82.8 236 30.5
Oeu042669.1 Olea europaea HOM05D007925 ORTHO05D009727 7.6e-12 75.1 237 37.6
Potri.010G147301 Populus trichocarpa HOM05D007925 ORTHO05D009727 2.2e-11 73.6 163 39.3
Cpa.g.sc9.40 Carica papaya HOM05D007925 ORTHO05D009727 2.9e-11 73.2 228 31.1
Lj6g0027570 Lotus japonicus HOM05D007925 ORTHO05D009727 2.9e-11 73.2 232 32.3
Lalb_Chr07g0182031 Lupinus albus HOM05D007925 ORTHO05D009727 1.1e-10 71.2 219 30.6
arahy.Tifrunner.gnm1.ann1.BW1DTW Arachis hypogaea HOM05D007925 ORTHO05D009727 1.6e-09 67.4 183 30.6
arahy.Tifrunner.gnm1.ann1.8N1160 Arachis hypogaea HOM05D007925 ORTHO05D009727 4.6e-09 65.9 183 30.1
Peaxi162Scf00935g00005 Petunia axillaris HOM05D007925 ORTHO05D009727 4.6e-09 65.9 150 34.7
Migut.B00760 Erythranthe guttata HOM05D007925 ORTHO05D009727 7.9e-09 65.1 236 32.2
SalBow8G2554 Salvia bowleyana HOM05D007925 ORTHO05D009727 1.8e-08 63.9 234 29.9
BraA01t04429Z Brassica rapa HOM05D011548 ORTHO05D013687 3.0e-08 63.2 231 30.3
Sc13g0006560 Simmondsia chinensis HOM05D007925 ORTHO05D009727 3.0e-08 63.2 133 33.1
CARHR081140 Cardamine hirsuta HOM05D011548 ORTHO05D013687 5.1e-08 62.4 227 27.3
Carub.0003s0606 Capsella rubella HOM05D011548 ORTHO05D013687 6.7e-08 62.0 227 29.5
AT3G06600 Arabidopsis thaliana HOM05D011548 ORTHO05D013687 1.1e-07 61.2 223 29.6
AL3G17650 Arabidopsis lyrata HOM05D011548 ORTHO05D013687 5.7e-07 58.9 227 30.4
CANSAT35G1711 Cannabis sativa HOM05D007925 ORTHO05D009727 1.6e-06 57.4 233 28.3
Thhalv10022295m.g Eutrema salsugineum HOM05D011548 ORTHO05D013687 4.8e-06 55.8 227 30.8
Manes.03G206101 Manihot esculenta HOM05D007925 ORTHO05D009727 4.8e-06 55.8 184 31.5


User provided reference genes

Program Settings