Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr4.3025 Acer truncatum HOM05D006322 ORTHO05D007716 1.4e-133 479.6 232 100.0
COL.COLO4_34636 Corchorus olitorius HOM05D006322 ORTHO05D007716 8.3e-102 374.0 228 76.3
QL06p011774 Quercus lobata HOM05D006322 ORTHO05D007716 5.9e-100 367.9 231 74.5
Haze_01283 Corylus avellana HOM05D006322 ORTHO05D007716 2.3e-99 365.9 228 77.2
Thecc.04G298700 Theobroma cacao HOM05D006322 ORTHO05D007716 5.0e-99 364.8 228 75.4
Cfa015332 Carpinus fangiana HOM05D006322 ORTHO05D007716 6.5e-99 364.4 228 77.2
Ciclev10005751m.g Citrus clementina HOM05D006322 ORTHO05D007716 1.1e-98 363.6 237 74.7
CiPaw.01G139400 Carya illinoinensis HOM05D006322 ORTHO05D007716 4.4e-95 351.7 213 76.5
Duzib151G0960 Durio zibethinus HOM05D006322 ORTHO05D007716 2.8e-94 349.0 222 73.9
Glyma.17G032700 Glycine max HOM05D006322 ORTHO05D007716 8.3e-94 347.4 229 70.3
Duzib052G0456 Durio zibethinus HOM05D006322 ORTHO05D007716 1.1e-93 347.1 222 73.4
Migut.N00046 Erythranthe guttata HOM05D006322 ORTHO05D007716 1.2e-92 343.6 224 71.0
Cpa.g.sc9.74 Carica papaya HOM05D006322 ORTHO05D007716 1.0e-91 340.5 223 73.1
CANSAT78G1173 Cannabis sativa HOM05D006322 ORTHO05D007716 2.3e-91 339.3 230 70.0
Manes.03G203000 Manihot esculenta HOM05D006322 ORTHO05D007716 2.3e-91 339.3 228 71.1
MSTRG.24817 Avicennia marina HOM05D006322 ORTHO05D007716 2.9e-91 339.0 222 70.7
Lj4g0019910 Lotus japonicus HOM05D006322 ORTHO05D007716 2.9e-91 339.0 230 68.7
arahy.Tifrunner.gnm1.ann1.WPA2XH Arachis hypogaea HOM05D006322 ORTHO05D007716 3.8e-91 338.6 224 69.6
Cc03_g00960 Coffea canephora HOM05D006322 ORTHO05D007716 3.8e-91 338.6 226 69.0
Medtr4g121940 Medicago truncatula HOM05D006322 ORTHO05D007716 3.8e-91 338.6 228 68.9
Gohir.A09G235000 Gossypium hirsutum HOM05D006322 ORTHO05D007716 5.0e-91 338.2 218 70.6
TWI09G0431 Tripterygium wilfordii HOM05D006322 ORTHO05D007716 5.0e-91 338.2 220 73.2
TAR636G2967 Trochodendron aralioides HOM05D006322 ORTHO05D007716 6.6e-91 337.8 215 73.0
VMungo1215G3118 Vigna mungo HOM05D006322 ORTHO05D007716 1.1e-90 337.0 229 65.1
Phvul.003G113400 Phaseolus vulgaris HOM05D006322 ORTHO05D007716 1.9e-90 336.3 229 65.9
Gohir.D09G235800 Gossypium hirsutum HOM05D006322 ORTHO05D007716 3.3e-90 335.5 217 70.5
arahy.Tifrunner.gnm1.ann1.57P81C Arachis hypogaea HOM05D006322 ORTHO05D007716 4.3e-90 335.1 224 68.8
Oeu019970.1 Olea europaea HOM05D006322 ORTHO05D007716 4.3e-90 335.1 218 70.2
FAN07G2163 Fragaria x ananassa HOM05D006322 ORTHO05D007716 2.1e-89 332.8 218 69.3
Aqoxy2G02768 Aquilegia oxysepala HOM05D006322 ORTHO05D007716 2.8e-89 332.4 218 72.9
Gorai.006G258900 Gossypium raimondii HOM05D006322 ORTHO05D007716 2.8e-89 332.4 217 69.6
MD16G1155500 Malus domestica HOM05D006322 ORTHO05D007716 6.1e-89 331.3 227 67.4
Solyc11g007570.2 Solanum lycopersicum HOM05D006322 ORTHO05D007716 6.1e-89 331.3 219 68.9
Sopen11g003410 Solanum pennellii HOM05D006322 ORTHO05D007716 8.0e-89 330.9 222 68.9
CSS0012053 Camellia sinensis var. sinensis HOM05D006322 ORTHO05D007716 1.4e-88 330.1 221 70.1
Lalb_Chr13g0298441 Lupinus albus HOM05D006322 ORTHO05D007716 1.4e-88 330.1 220 67.7
PGSC0003DMG400027315 Solanum tuberosum HOM05D006322 ORTHO05D007716 1.4e-88 330.1 215 70.2
SGA_v2.0_scaffold119G32659 Striga asiatica HOM05D006322 ORTHO05D007716 1.4e-88 330.1 211 71.6
Actinidia40367 Actinidia chinensis HOM05D006322 ORTHO05D007716 2.3e-88 329.3 214 71.5
Psat4g024200 Pisum sativum HOM05D006322 ORTHO05D007716 5.2e-88 328.2 220 67.3
PGR031G3552 Punica granatum HOM05D006322 ORTHO05D007716 8.9e-88 327.4 213 69.5
Peaxi162Scf00244g00413 Petunia axillaris HOM05D006322 ORTHO05D007716 4.4e-87 325.1 218 69.7
RcHm_v2.0_Chr4g0424801 Rosa chinensis HOM05D006322 ORTHO05D007716 1.7e-86 323.2 213 68.5
Eucgr.A00353 Eucalyptus grandis HOM05D006322 ORTHO05D007716 2.9e-86 322.4 212 70.3
Nitab4.5_0001807g0060 Nicotiana tabacum HOM05D006322 ORTHO05D007716 4.9e-86 321.6 219 68.0
Ca_21447_v3 Cicer arietinum L. HOM05D006322 ORTHO05D007716 2.4e-85 319.3 229 65.1
Nn3g21692 Nelumbo nucifera HOM05D006322 ORTHO05D007716 3.2e-85 318.9 215 70.2
Nitab4.5_0002259g0050 Nicotiana tabacum HOM05D006322 ORTHO05D007716 5.4e-85 318.2 217 67.7
HanXRQChr13g0395571 Helianthus annuus HOM05D006322 ORTHO05D007716 7.0e-85 317.8 230 65.2
SalBow5G5236 Salvia bowleyana HOM05D006322 ORTHO05D007716 9.2e-85 317.4 218 67.4
Lju470A16T21 Lonicera japonica HOM05D006322 ORTHO05D007716 1.6e-84 316.6 231 65.8
Psat4g024280 Pisum sativum HOM05D006322 ORTHO05D007716 2.0e-84 316.2 218 64.2
Prupe.1G119400 Prunus persica HOM05D006322 ORTHO05D007716 2.0e-84 316.2 225 65.8
Sc25g0003310 Simmondsia chinensis HOM05D006322 ORTHO05D007716 7.8e-84 314.3 225 65.8
Potri.008G106600 Populus trichocarpa HOM05D006322 ORTHO05D007716 1.0e-83 313.9 223 64.6
Hma1.2p1_0078F.1_g040000 Hydrangea macrophylla HOM05D006322 ORTHO05D007716 1.7e-83 313.2 214 69.6
ECA233G0552 Erigeron canadensis HOM05D006322 ORTHO05D007716 2.3e-83 312.8 216 65.7
EL10Ac3g05469 Beta vulgaris HOM05D006322 ORTHO05D007716 3.9e-83 312.0 222 66.2
GSVIVG01035010001 Vitis vinifera HOM05D006322 ORTHO05D007716 3.9e-83 312.0 205 71.7
PSO357G0527 Papaver somniferum HOM05D006322 ORTHO05D007716 6.6e-83 311.2 226 65.0
Lsat_1_v5_gn_6_16821 Lactuca sativa HOM05D006322 ORTHO05D007716 1.5e-82 310.1 221 67.0
Dinv44297 Davidia involucrata HOM05D006322 ORTHO05D007716 1.9e-82 309.7 185 78.4
Carub.0003s1674 Capsella rubella HOM05D006322 ORTHO05D007716 3.3e-82 308.9 221 66.5
CARHR092240 Cardamine hirsuta HOM05D006322 ORTHO05D007716 2.1e-81 306.2 223 65.0
PSO170G6693 Papaver somniferum HOM05D006322 ORTHO05D007716 3.6e-81 305.4 226 65.9
BraA03t13148Z Brassica rapa HOM05D006322 ORTHO05D007716 1.4e-80 303.5 222 64.9
Thhalv10021446m.g Eutrema salsugineum HOM05D006322 ORTHO05D007716 1.8e-80 303.1 223 63.7
C03p48530 Brassica napus HOM05D006322 ORTHO05D007716 4.0e-80 302.0 223 64.1
Aa31LG8G4030 Aethionema arabicum HOM05D006322 ORTHO05D007716 6.8e-80 301.2 223 63.7
BcaB04g18916 Brassica carinata HOM05D006322 ORTHO05D007716 6.8e-80 301.2 223 63.7
BcaC01g03797 Brassica carinata HOM05D006322 ORTHO05D007716 6.8e-80 301.2 223 63.7
BolC3t17131H Brassica oleracea HOM05D006322 ORTHO05D007716 6.8e-80 301.2 223 63.7
Sabra08G0080400 Salix brachista HOM05D006322 ORTHO05D007716 6.8e-80 301.2 222 62.2
Hund11963 Selenicereus undatus HOM05D006322 ORTHO05D007716 8.9e-80 300.8 216 64.8
AL3G29970 Arabidopsis lyrata HOM05D006322 ORTHO05D007716 1.2e-79 300.4 221 64.7
A03p40000 Brassica napus HOM05D006322 ORTHO05D007716 2.6e-79 299.3 222 64.0
AT3G16990 Arabidopsis thaliana HOM05D006322 ORTHO05D007716 3.4e-79 298.9 221 64.3
vmacro08057 Vaccinium macrocarpon HOM05D006322 ORTHO05D007716 9.8e-79 297.4 223 62.3
FAN12G2263 Fragaria x ananassa HOM05D006322 ORTHO05D007716 2.2e-78 296.2 198 68.2
DCAR_027007 Daucus carota HOM05D006322 ORTHO05D007716 1.4e-77 293.5 285 53.3
Rhsim04G0234900 Rhododendron simsii HOM05D006322 ORTHO05D007716 1.4e-77 293.5 226 63.7
MBI19_g07237_MAGBIO Magnolia biondii HOM05D006322 ORTHO05D007716 3.2e-77 292.4 217 64.1
Sp3g15210 Schrenkiella parvula HOM05D006322 ORTHO05D007716 1.6e-76 290.0 216 62.0
CsaV3_6G022370 Cucumis sativus L. HOM05D006322 ORTHO05D007716 1.0e-75 287.3 210 63.3
MELO3C021273.2 Cucumis melo HOM05D006322 ORTHO05D007716 5.0e-75 285.0 210 64.8
BcaB04g18918 Brassica carinata HOM05D006322 ORTHO05D007716 2.3e-72 276.2 223 60.5
ClCG06G004620 Citrullus lanatus HOM05D006322 ORTHO05D007716 1.2e-71 273.9 227 57.7
Sed0017771 Sechium edule HOM05D006322 ORTHO05D007716 3.4e-71 272.3 227 58.6
CAN.G135.71 Capsicum annuum HOM05D006322 ORTHO05D007716 4.4e-71 271.9 176 71.0
ATR0796G257 Amborella trichopoda HOM05D006322 ORTHO05D007716 3.2e-69 265.8 222 55.4
FvH4_4g19550 Fragaria vesca HOM05D006322 ORTHO05D007716 2.1e-68 263.1 181 66.9
DCAR_030477 Daucus carota HOM05D006322 ORTHO05D007716 7.8e-68 261.2 218 56.4
Os03g0306900 Oryza sativa ssp. japonica HOM05D006322 ORTHO05D007716 8.6e-67 257.7 209 55.5
HPP92_001241 Vanilla planifolia HOM05D006322 ORTHO05D007716 1.9e-66 256.5 216 57.9
Zm00001eb396140 Zea mays HOM05D006322 ORTHO05D007716 2.5e-66 256.1 209 55.5
Peaxi162Scf00244g00510 Petunia axillaris HOM05D006322 ORTHO05D007716 2.1e-65 253.1 215 53.5
SHI00180 Sapria himalayana HOM05D006322 ORTHO05D007716 2.1e-65 253.1 250 48.8
AUR62041396 Chenopodium quinoa HOM05D006322 ORTHO05D007716 3.4e-63 245.7 176 66.5
SEGI_24166 Sequoiadendron giganteum HOM05D006322 ORTHO05D007716 2.2e-62 243.0 219 54.3
AUR62016124 Chenopodium quinoa HOM05D006322 ORTHO05D007716 9.2e-61 237.7 175 64.6
THA.LOC104802603 Tarenaya hassleriana HOM05D006322 ORTHO05D007716 2.1e-60 236.5 176 60.8
Ah.13g071980 Amaranthus hybridus HOM05D006322 ORTHO05D007716 3.9e-59 232.3 214 55.6
Solyc11g007560.2 Solanum lycopersicum HOM05D006322 ORTHO05D007716 3.9e-59 232.3 224 49.6
Actinidia27045 Actinidia chinensis HOM05D006322 ORTHO05D007716 2.5e-58 229.6 155 69.0
CAN.G135.72 Capsicum annuum HOM05D006322 ORTHO05D007716 1.1e-56 224.2 217 48.8
TPR.G20694 Trifolium pratense HOM05D006322 ORTHO05D007716 7.6e-55 218.0 160 61.9
Mapoly0003s0261 Marchantia polymorpha HOM05D006322 ORTHO05D007716 6.4e-54 214.9 219 43.4
Nitab4.5_0001807g0070 Nicotiana tabacum HOM05D006322 ORTHO05D007716 1.1e-53 214.2 223 47.5
TAR362G0340 Trochodendron aralioides HOM05D006322 ORTHO05D007716 1.1e-53 214.2 215 50.7
SMO116G0484 Selaginella moellendorffii HOM05D006322 ORTHO05D007716 6.0e-52 208.4 214 46.7
EL10Ac7g16563 Beta vulgaris HOM05D006322 ORTHO05D007716 3.0e-51 206.1 158 62.7
AagrBONN_evm.TU.Sc2ySwM_117.1930 Anthoceros agrestis HOM05D006322 ORTHO05D007716 6.2e-49 198.4 214 44.4
BcaB04g18915 Brassica carinata HOM05D001503 ORTHO05D003820 8.1e-49 198.0 188 55.3
Pp3c10_15580 Physcomitrium patens HOM05D006322 ORTHO05D007716 1.5e-47 193.7 209 45.9
Lalb_Chr20g0120881 Lupinus albus HOM05D006322 ORTHO05D007716 6.4e-46 188.3 141 59.6
PGSC0003DMG400040588 Solanum tuberosum HOM05D006322 ORTHO05D007716 1.5e-42 177.2 166 51.2
Actinidia15599 Actinidia chinensis HOM05D006322 ORTHO05D007716 8.1e-41 171.4 114 72.8
Atru.chr4.3023 Acer truncatum HOM05D006322 ORTHO05D007716 1.6e-36 157.1 87 86.2
CBR_g45493 Chara braunii HOM05D006322 ORTHO05D007716 2.0e-31 140.2 220 31.4
Glyma.07G240701 Glycine max HOM05D006322 ORTHO05D007716 8.4e-30 134.8 108 62.0
EL10Ac9g22265 Beta vulgaris HOM05D006322 ORTHO05D007716 4.5e-23 112.5 96 54.2
Cre09.g407600 Chlamydomonas reinhardtii HOM05D006322 ORTHO05D007716 8.5e-22 108.2 222 32.9
Atru.chr4.2979 Acer truncatum HOM05D006322 ORTHO05D007716 3.3e-18 96.3 45 91.1
CANSAT54G0480 Cannabis sativa HOM05D006322 ORTHO05D007716 1.9e-13 80.5 75 53.3
BcaB04g18920 Brassica carinata HOM05D006322 ORTHO05D007716 2.7e-12 76.6 80 51.2
CBR_g56708 Chara braunii HOM05D009436 ORTHO05D000048 4.7e-12 75.9 119 32.8
EL10Ac1g02106 Beta vulgaris HOM05D006322 ORTHO05D007716 1.0e-11 74.7 55 63.6
Lalb_Chr20g0120891 Lupinus albus HOM05D006322 ORTHO05D007716 9.7e-10 68.2 50 58.0
PSO782G2289 Papaver somniferum HOM05D000256 ORTHO05D000119 3.1e-08 63.2 47 55.3


User provided reference genes

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