Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr4.2960 Acer truncatum HOM05D002110 ORTHO05D001148 2.4e-108 395.6 213 100.0
Thecc.04G295400 Theobroma cacao HOM05D002110 ORTHO05D001148 1.2e-30 137.5 171 50.9
Ciclev10004258m.g Citrus clementina HOM05D002110 ORTHO05D001148 4.5e-30 135.6 108 68.5
Cfa015480 Carpinus fangiana HOM05D002110 ORTHO05D001148 2.3e-29 133.3 108 71.3
Haze_01085 Corylus avellana HOM05D002110 ORTHO05D001148 3.8e-29 132.5 108 68.5
QL06p011361 Quercus lobata HOM05D002110 ORTHO05D001148 9.5e-28 127.9 203 42.9
Duzib151G0237 Durio zibethinus HOM05D002110 ORTHO05D001148 1.6e-27 127.1 168 48.2
Gorai.011G195300 Gossypium raimondii HOM05D002110 ORTHO05D001148 2.8e-27 126.3 111 64.9
GSVIVG01035042001 Vitis vinifera HOM05D002110 ORTHO05D001148 6.1e-27 125.2 108 66.7
Dinv02077 Davidia involucrata HOM05D002110 ORTHO05D001148 1.0e-26 124.4 108 64.8
CSS0027216 Camellia sinensis var. sinensis HOM05D002110 ORTHO05D001148 2.3e-26 123.2 108 65.7
Duzib212G0250 Durio zibethinus HOM05D002110 ORTHO05D001148 2.3e-26 123.2 171 48.0
Gohir.D10G174600 Gossypium hirsutum HOM05D002110 ORTHO05D001148 2.3e-26 123.2 111 64.0
Manes.15G006700 Manihot esculenta HOM05D002110 ORTHO05D001148 2.3e-26 123.2 106 65.1
Potri.010G140900 Populus trichocarpa HOM05D002110 ORTHO05D001148 5.2e-26 122.1 108 61.1
Hma1.2p1_0013F.1_g008920 Hydrangea macrophylla HOM05D002110 ORTHO05D001148 3.4e-25 119.4 108 63.0
Dinv44317 Davidia involucrata HOM05D002110 ORTHO05D001148 4.4e-25 119.0 108 64.8
Actinidia14271 Actinidia chinensis HOM05D002110 ORTHO05D001148 9.8e-25 117.9 105 64.8
Prupe.1G125400 Prunus persica HOM05D002110 ORTHO05D001148 1.3e-24 117.5 108 63.9
Sabra10G0108900 Salix brachista HOM05D002110 ORTHO05D001148 3.7e-24 115.9 108 59.3
TAR636G1488 Trochodendron aralioides HOM05D002110 ORTHO05D001148 3.7e-24 115.9 108 58.3
MD13G1158100 Malus domestica HOM05D002110 ORTHO05D001148 6.4e-24 115.2 108 62.0
Nn3g21631 Nelumbo nucifera HOM05D002110 ORTHO05D001148 8.3e-24 114.8 108 63.0
MSTRG.24813 Avicennia marina HOM05D002110 ORTHO05D001148 1.1e-23 114.4 106 60.4
TWI53G1428 Tripterygium wilfordii HOM05D002110 ORTHO05D001148 1.8e-23 113.6 108 59.3
Actinidia13375 Actinidia chinensis HOM05D002110 ORTHO05D001148 5.4e-23 112.1 116 58.6
MD16G1158900 Malus domestica HOM05D002110 ORTHO05D001148 5.4e-23 112.1 112 59.8
RcHm_v2.0_Chr4g0424321 Rosa chinensis HOM05D002110 ORTHO05D001148 5.4e-23 112.1 112 57.1
CiPaw.01G142000 Carya illinoinensis HOM05D002110 ORTHO05D001148 7.0e-23 111.7 112 56.2
Ca_01879_v3 Cicer arietinum L. HOM05D002110 ORTHO05D001148 1.2e-22 110.9 109 58.7
FAN12G1080 Fragaria x ananassa HOM05D002110 ORTHO05D001148 1.2e-22 110.9 108 58.3
CSS0026202 Camellia sinensis var. sinensis HOM05D002110 ORTHO05D001148 1.6e-22 110.5 109 59.6
TWI73G0849 Tripterygium wilfordii HOM05D002110 ORTHO05D001148 1.6e-22 110.5 108 59.3
FvH4_4g19300 Fragaria vesca HOM05D002110 ORTHO05D001148 2.0e-22 110.2 108 57.4
FAN12G1009 Fragaria x ananassa HOM05D002110 ORTHO05D001148 2.7e-22 109.8 108 57.4
Lj6g0006757 Lotus japonicus HOM05D002110 ORTHO05D001148 2.7e-22 109.8 108 59.3
Glyma.09G039000 Glycine max HOM05D002110 ORTHO05D001148 3.5e-22 109.4 109 58.7
Actinidia15585 Actinidia chinensis HOM05D002110 ORTHO05D001148 4.6e-22 109.0 106 60.4
FAN07G1371 Fragaria x ananassa HOM05D002110 ORTHO05D001148 4.6e-22 109.0 108 58.3
Medtr2g034810 Medicago truncatula HOM05D002110 ORTHO05D001148 5.9e-22 108.6 109 57.8
Glyma.15G144100 Glycine max HOM05D002110 ORTHO05D001148 7.8e-22 108.2 108 57.4
Psat1g159720 Pisum sativum HOM05D002110 ORTHO05D001148 1.0e-21 107.8 108 58.3
Sabra08G0082300 Salix brachista HOM05D002110 ORTHO05D001148 2.3e-21 106.7 108 55.6
Potri.008G108600 Populus trichocarpa HOM05D002110 ORTHO05D001148 6.6e-21 105.1 108 53.7
Potri.T171201 Populus trichocarpa HOM05D002110 ORTHO05D001148 6.6e-21 105.1 108 53.7
DCAR_030482 Daucus carota HOM05D002110 ORTHO05D001148 8.6e-21 104.8 108 56.5
TPR.G30869 Trifolium pratense HOM05D002110 ORTHO05D001148 8.6e-21 104.8 109 56.9
Gohir.D09G063300 Gossypium hirsutum HOM05D002110 ORTHO05D001148 1.1e-20 104.4 112 58.0
Gorai.006G078400 Gossypium raimondii HOM05D002110 ORTHO05D001148 1.1e-20 104.4 112 58.0
Gohir.A09G064500 Gossypium hirsutum HOM05D002110 ORTHO05D001148 1.5e-20 104.0 112 58.0
Oeu016267.1 Olea europaea HOM05D002110 ORTHO05D001148 1.5e-20 104.0 108 59.3
Eucgr.A00199 Eucalyptus grandis HOM05D002110 ORTHO05D001148 5.6e-20 102.1 109 57.8
Nitab4.5_0000169g0020 Nicotiana tabacum HOM05D002110 ORTHO05D001148 7.3e-20 101.7 108 52.8
Lalb_Chr18g0058911 Lupinus albus HOM05D002110 ORTHO05D001148 9.5e-20 101.3 107 57.0
Cc03_g01150 Coffea canephora HOM05D002110 ORTHO05D001148 1.6e-19 100.5 106 53.8
THA.LOC104802701 Tarenaya hassleriana HOM05D002110 ORTHO05D001148 1.6e-19 100.5 114 52.6
Cpa.g.sc9.96 Carica papaya HOM05D002110 ORTHO05D001148 8.0e-19 98.2 100 57.0
Phvul.009G254000 Phaseolus vulgaris HOM05D002110 ORTHO05D001148 1.4e-18 97.4 108 52.8
vmacro08075 Vaccinium macrocarpon HOM05D002110 ORTHO05D001148 1.8e-18 97.1 108 56.5
Oeu019953.1 Olea europaea HOM05D002110 ORTHO05D001148 2.3e-18 96.7 107 57.9
Sed0010663 Sechium edule HOM05D002110 ORTHO05D001148 3.1e-18 96.3 108 53.7
Rhsim04G0232500 Rhododendron simsii HOM05D002110 ORTHO05D001148 4.0e-18 95.9 112 54.5
VMungo1309G1815 Vigna mungo HOM05D002110 ORTHO05D001148 4.0e-18 95.9 108 55.6
Actinidia40356 Actinidia chinensis HOM05D002110 ORTHO05D001148 5.2e-18 95.5 106 56.6
Lj3C827G8 Lonicera japonica HOM05D002110 ORTHO05D001148 6.8e-18 95.1 109 55.0
DCAR_002502 Daucus carota HOM05D002110 ORTHO05D001148 2.0e-17 93.6 108 51.9
Oeu016480.1 Olea europaea HOM05D002110 ORTHO05D001148 2.0e-17 93.6 112 50.0
Peaxi162Scf00065g00328 Petunia axillaris HOM05D002110 ORTHO05D001148 2.0e-17 93.6 108 50.9
arahy.Tifrunner.gnm1.ann1.LS1PSE Arachis hypogaea HOM05D002110 ORTHO05D001148 5.8e-17 92.0 108 52.8
PSO210G6724 Papaver somniferum HOM05D002110 ORTHO05D001148 5.8e-17 92.0 112 51.8
Nitab4.5_0001695g0010 Nicotiana tabacum HOM05D002110 ORTHO05D001148 7.5e-17 91.7 109 50.5
Sc19g0003440 Simmondsia chinensis HOM05D002110 ORTHO05D001148 7.5e-17 91.7 112 49.1
AUR62016148 Chenopodium quinoa HOM05D002110 ORTHO05D001148 9.8e-17 91.3 106 54.7
arahy.Tifrunner.gnm1.ann1.32S0SQ Arachis hypogaea HOM05D002110 ORTHO05D001148 1.7e-16 90.5 108 51.9
AUR62035064 Chenopodium quinoa HOM05D002110 ORTHO05D001148 1.7e-16 90.5 107 56.1
AUR62042948 Chenopodium quinoa HOM05D002110 ORTHO05D001148 1.7e-16 90.5 107 56.1
AUR62043575 Chenopodium quinoa HOM05D002110 ORTHO05D001148 1.7e-16 90.5 107 56.1
MELO3C021285.2 Cucumis melo HOM05D002110 ORTHO05D001148 1.7e-16 90.5 127 48.0
PSO761G0478 Papaver somniferum HOM05D002110 ORTHO05D001148 1.7e-16 90.5 112 50.9
TAR365G0698 Trochodendron aralioides HOM05D002110 ORTHO05D001148 2.9e-16 89.7 111 50.5
Aqoxy2G02804 Aquilegia oxysepala HOM05D002110 ORTHO05D001148 8.3e-16 88.2 112 47.3
Lalb_Chr20g0120991 Lupinus albus HOM05D002110 ORTHO05D001148 1.9e-15 87.0 109 51.4
CsaV3_6G022550 Cucumis sativus L. HOM05D002110 ORTHO05D001148 2.4e-15 86.7 127 47.2
Ah.04g154900 Amaranthus hybridus HOM05D002110 ORTHO05D001148 4.1e-15 85.9 106 52.8
Nn4g25653 Nelumbo nucifera HOM05D002110 ORTHO05D001148 4.1e-15 85.9 108 48.1
Oeu006438.1 Olea europaea HOM05D002110 ORTHO05D001148 9.2e-15 84.7 105 49.5
ClCG06G004760 Citrullus lanatus HOM05D002110 ORTHO05D001148 2.0e-14 83.6 131 45.8
SGA_v2.0_scaffold119G32677 Striga asiatica HOM05D002110 ORTHO05D001148 2.7e-14 83.2 107 47.7
Duzib052G1132 Durio zibethinus HOM05D002110 ORTHO05D001148 3.5e-14 82.8 113 49.6
SalBow8G0670 Salvia bowleyana HOM05D002110 ORTHO05D001148 3.5e-14 82.8 109 44.0
SalBow8G0820 Salvia bowleyana HOM05D002110 ORTHO05D001148 3.5e-14 82.8 109 44.0
Hund11953 Selenicereus undatus HOM05D002110 ORTHO05D001148 7.8e-14 81.6 106 51.9
Solyc01g060410.4 Solanum lycopersicum HOM05D002110 ORTHO05D001148 1.0e-13 81.3 112 45.5
PGSC0003DMG400014987 Solanum tuberosum HOM05D002110 ORTHO05D001148 3.9e-13 79.3 112 44.6
Lalb_Chr07g0182181 Lupinus albus HOM05D002110 ORTHO05D001148 5.0e-13 79.0 109 45.0
Hund02955 Selenicereus undatus HOM05D002110 ORTHO05D001148 5.0e-13 79.0 106 47.2
Sopen01g026550 Solanum pennellii HOM05D002110 ORTHO05D001148 8.6e-13 78.2 108 44.4
Migut.N00058 Erythranthe guttata HOM05D002110 ORTHO05D001148 1.1e-12 77.8 104 44.2
MBI19_g22896_MAGBIO Magnolia biondii HOM05D002110 ORTHO05D001148 1.9e-12 77.0 112 47.3
Dinv24422 Davidia involucrata HOM05D002110 ORTHO05D001148 2.5e-12 76.6 98 46.9
Dinv30868 Davidia involucrata HOM05D002110 ORTHO05D001148 3.3e-12 76.3 84 48.8
MBI19_g46294_MAGBIO Magnolia biondii HOM05D002110 ORTHO05D001148 5.6e-12 75.5 112 46.4
SGA_v2.0_scaffold107G30799 Striga asiatica HOM05D002110 ORTHO05D001148 1.2e-11 74.3 113 44.2
CSS0050364 Camellia sinensis var. sinensis HOM05D002110 ORTHO05D001148 2.1e-11 73.6 105 43.8
MSTRG.3871 Avicennia marina HOM05D002110 ORTHO05D001148 4.7e-11 72.4 104 46.2
Lsat_1_v5_gn_6_19261 Lactuca sativa HOM05D002110 ORTHO05D001148 6.2e-11 72.0 110 43.6
Cc02_g34790 Coffea canephora HOM05D002110 ORTHO05D001148 2.3e-10 70.1 113 39.8
MBI18_g09596_MAGBIO Magnolia biondii HOM05D002110 ORTHO05D001148 2.3e-10 70.1 112 42.9
Glyma.17G031500 Glycine max HOM05D002110 ORTHO05D001148 3.1e-10 69.7 112 42.0
Manes.03G201600 Manihot esculenta HOM05D002110 ORTHO05D001148 5.2e-10 68.9 108 39.8
VMungo1215G1777 Vigna mungo HOM05D002110 ORTHO05D001148 6.8e-10 68.6 108 42.6
GSVIVG01031214001 Vitis vinifera HOM05D002110 ORTHO05D001148 1.5e-09 67.4 114 39.5
HanXRQChr13g0394391 Helianthus annuus HOM05D002110 ORTHO05D001148 2.0e-09 67.0 107 41.1
Manes.09G175400 Manihot esculenta HOM05D002110 ORTHO05D001148 5.8e-09 65.5 93 39.8
Sed0024614 Sechium edule HOM05D002110 ORTHO05D001148 1.7e-08 63.9 83 50.6
ECA233G6262 Erigeron canadensis HOM05D002110 ORTHO05D001148 2.2e-08 63.5 108 38.0
HanXRQChr02g0049811 Helianthus annuus HOM05D002110 ORTHO05D001148 2.2e-08 63.5 108 39.8
Glyma.07G242700 Glycine max HOM05D002110 ORTHO05D001148 6.4e-08 62.0 108 42.6
Phvul.003G110900 Phaseolus vulgaris HOM05D002110 ORTHO05D001148 6.4e-08 62.0 108 36.1
EL10Ac3g04924 Beta vulgaris HOM05D002110 ORTHO05D001148 8.3e-08 61.6 98 44.9
PSO210G7621 Papaver somniferum HOM05D002110 ORTHO05D001148 1.2e-06 57.8 109 40.4
Actinidia16849 Actinidia chinensis HOM05D002110 ORTHO05D001148 1.6e-06 57.4 97 41.2
Hma1.2p1_0008F-1.1_g005780 Hydrangea macrophylla HOM05D002110 ORTHO05D001148 2.1e-06 57.0 106 39.6
Peaxi162Scf00673g00028 Petunia axillaris HOM05D002110 ORTHO05D001148 3.5e-06 56.2 105 38.1
Thecc.05G320800 Theobroma cacao HOM05D002110 ORTHO05D001148 4.6e-06 55.8 111 39.6
SalBow7G1336 Salvia bowleyana HOM05D002110 ORTHO05D001148 6.0e-06 55.5 104 36.5
vmacro01552 Vaccinium macrocarpon HOM05D002110 ORTHO05D001148 6.0e-06 55.5 104 37.5


User provided reference genes

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