Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr4.2903 Acer truncatum HOM05D000761 ORTHO05D030773 2.7e-67 258.5 125 100.0
Atru.chr9.2219 Acer truncatum HOM05D000761 ORTHO05D003834 9.5e-12 73.9 49 73.5
Dinv37659 Davidia involucrata HOM05D000761 ORTHO05D003834 6.2e-11 71.2 48 72.9
Thecc.03G276400 Theobroma cacao HOM05D000761 ORTHO05D003834 3.1e-10 68.9 49 69.4
Prupe.5G097500 Prunus persica HOM05D000761 ORTHO05D003834 5.2e-10 68.2 49 69.4
Cpa.g.sc202.8 Carica papaya HOM05D000761 ORTHO05D003834 6.8e-10 67.8 49 69.4
Dinv38956 Davidia involucrata HOM05D000761 ORTHO05D003834 8.9e-10 67.4 45 73.3
GSVIVG01019778001 Vitis vinifera HOM05D000761 ORTHO05D003834 8.9e-10 67.4 50 68.0
Manes.02G023500 Manihot esculenta HOM05D000761 ORTHO05D003834 2.6e-09 65.9 50 70.0
MD06G1079300 Malus domestica HOM05D000761 ORTHO05D003834 4.4e-09 65.1 49 63.3
Potri.003G124800 Populus trichocarpa HOM05D000761 ORTHO05D003834 4.4e-09 65.1 51 66.7
MD14G1101900 Malus domestica HOM05D000761 ORTHO05D003834 7.5e-09 64.3 49 65.3
Glyma.05G206300 Glycine max HOM05D000761 ORTHO05D003834 9.9e-09 63.9 46 71.7
COL.COLO4_34437 Corchorus olitorius HOM05D000761 ORTHO05D003834 1.3e-08 63.5 49 65.3
RcHm_v2.0_Chr7g0198241 Rosa chinensis HOM05D000761 ORTHO05D003834 1.3e-08 63.5 49 63.3
CANSAT21G0025 Cannabis sativa HOM05D000761 ORTHO05D003834 1.7e-08 63.2 49 63.3
Nitab4.5_0000360g0170 Nicotiana tabacum HOM05D000761 ORTHO05D003834 1.7e-08 63.2 167 28.1
QL12p018315 Quercus lobata HOM05D000761 ORTHO05D003834 1.7e-08 63.2 50 56.0
RhsimUnG0098700 Rhododendron simsii HOM05D000761 ORTHO05D003834 1.7e-08 63.2 45 66.7
Duzib084G0230 Durio zibethinus HOM05D000761 ORTHO05D003834 2.2e-08 62.8 49 63.3
Cfa012155 Carpinus fangiana HOM05D000761 ORTHO05D003834 2.9e-08 62.4 50 60.0
Haze_08873 Corylus avellana HOM05D000761 ORTHO05D003834 2.9e-08 62.4 50 62.0
FvH4_5g02060 Fragaria vesca HOM05D000761 ORTHO05D003834 3.7e-08 62.0 49 61.2
FAN04G1116 Fragaria x ananassa HOM05D000761 ORTHO05D003834 3.7e-08 62.0 49 61.2
FAN08G2026 Fragaria x ananassa HOM05D000761 ORTHO05D003834 3.7e-08 62.0 49 61.2
FAN18G4383 Fragaria x ananassa HOM05D000761 ORTHO05D003834 3.7e-08 62.0 49 61.2
Actinidia14551 Actinidia chinensis HOM05D000761 ORTHO05D003834 4.9e-08 61.6 50 62.0
CiPaw.12G094700 Carya illinoinensis HOM05D000761 ORTHO05D003834 4.9e-08 61.6 50 60.0
Rhsim02G0227200 Rhododendron simsii HOM05D000761 ORTHO05D003834 4.9e-08 61.6 45 64.4
Sabra03G0088400 Salix brachista HOM05D000761 ORTHO05D003834 8.3e-08 60.8 50 64.0
VMungo1215G1984 Vigna mungo HOM05D000761 ORTHO05D003834 8.3e-08 60.8 49 63.3
CiPaw.11G137500 Carya illinoinensis HOM05D000761 ORTHO05D003834 1.1e-07 60.5 50 58.0
Glyma.01G218800 Glycine max HOM05D000761 ORTHO05D003834 1.1e-07 60.5 49 63.3
Glyma.11G024700 Glycine max HOM05D000761 ORTHO05D003834 1.1e-07 60.5 49 63.3
CSS0001390 Camellia sinensis var. sinensis HOM05D000761 ORTHO05D003834 1.4e-07 60.1 51 62.7
CSS0003082 Camellia sinensis var. sinensis HOM05D000761 ORTHO05D003834 1.4e-07 60.1 51 62.7
Gorai.003G159600 Gossypium raimondii HOM05D000761 ORTHO05D003834 1.9e-07 59.7 49 63.3
Lalb_Chr05g0211861 Lupinus albus HOM05D000761 ORTHO05D003834 1.9e-07 59.7 49 61.2
Manes.01G063100 Manihot esculenta HOM05D000761 ORTHO05D003834 1.9e-07 59.7 50 62.0
Phvul.002G287900 Phaseolus vulgaris HOM05D000761 ORTHO05D003834 1.9e-07 59.7 49 61.2
TWI81G0264 Tripterygium wilfordii HOM05D000761 ORTHO05D003834 1.9e-07 59.7 50 56.0
FAN13G0187 Fragaria x ananassa HOM05D000761 ORTHO05D003834 2.4e-07 59.3 48 60.4
Gohir.A03G015700 Gossypium hirsutum HOM05D000761 ORTHO05D003834 2.4e-07 59.3 49 63.3
Gohir.D03G152200 Gossypium hirsutum HOM05D000761 ORTHO05D003834 2.4e-07 59.3 49 63.3
Hma1.2p1_1922F.1_g307590 Hydrangea macrophylla HOM05D000761 ORTHO05D003834 2.4e-07 59.3 45 62.2
Lj4g0002308 Lotus japonicus HOM05D000761 ORTHO05D003834 2.4e-07 59.3 50 62.0
Glyma.08G013200 Glycine max HOM05D000761 ORTHO05D003834 3.2e-07 58.9 49 63.3
Ca_17545_v3 Cicer arietinum L. HOM05D000761 ORTHO05D003834 4.1e-07 58.5 45 66.7
MELO3C016348.2 Cucumis melo HOM05D000761 ORTHO05D003834 4.1e-07 58.5 50 54.0
Oeu009179.1 Olea europaea HOM05D000761 ORTHO05D003834 4.1e-07 58.5 50 58.0
Potri.001G106600 Populus trichocarpa HOM05D000761 ORTHO05D003834 4.1e-07 58.5 46 63.0
TWI60G0369 Tripterygium wilfordii HOM05D000761 ORTHO05D003834 4.1e-07 58.5 50 54.0
Duzib205G1385 Durio zibethinus HOM05D000761 ORTHO05D003834 5.4e-07 58.2 49 59.2
Lj8A229T68 Lonicera japonica HOM05D000761 ORTHO05D003834 5.4e-07 58.2 45 62.2
Lj4g0007820 Lotus japonicus HOM05D000761 ORTHO05D003834 5.4e-07 58.2 49 57.1
LjContig00312_ERROPOS870357g0014846 Lotus japonicus HOM05D000761 ORTHO05D003834 5.4e-07 58.2 49 57.1
vmacro11311 Vaccinium macrocarpon HOM05D000761 ORTHO05D003834 7.1e-07 57.8 55 56.4
Ciclev10019211m.g Citrus clementina HOM05D000761 ORTHO05D003834 1.2e-06 57.0 45 62.2
Nitab4.5_0002776g0090 Nicotiana tabacum HOM05D000761 ORTHO05D003834 1.2e-06 57.0 51 56.9
Phvul.002G156600 Phaseolus vulgaris HOM05D000761 ORTHO05D003834 1.2e-06 57.0 49 59.2
Aqoxy5G04001 Aquilegia oxysepala HOM05D000761 ORTHO05D003834 1.6e-06 56.6 54 48.1
arahy.Tifrunner.gnm1.ann1.3R34Z6 Arachis hypogaea HOM05D000761 ORTHO05D003834 1.6e-06 56.6 49 57.1
MSTRG.25593 Avicennia marina HOM05D000761 ORTHO05D003834 1.6e-06 56.6 51 58.8
CsaV3_5G002960 Cucumis sativus L. HOM05D000761 ORTHO05D003834 1.6e-06 56.6 39 69.2
Eucgr.D01865 Eucalyptus grandis HOM05D000761 ORTHO05D003834 1.6e-06 56.6 50 54.0
Hma1.2p1_0084F.1_g043330 Hydrangea macrophylla HOM05D000761 ORTHO05D030773 1.6e-06 56.6 45 60.0
Hma1.2p1_0084F.1_g043345 Hydrangea macrophylla HOM05D000761 ORTHO05D030773 1.6e-06 56.6 45 60.0
CsaV3_4G006010 Cucumis sativus L. HOM05D000761 ORTHO05D003834 2.1e-06 56.2 50 50.0
Lj1g0009374 Lotus japonicus HOM05D000761 ORTHO05D003834 2.1e-06 56.2 49 55.1
TAR374G1707 Trochodendron aralioides HOM05D000761 ORTHO05D003834 2.1e-06 56.2 48 60.4
arahy.Tifrunner.gnm1.ann1.BJVD1V Arachis hypogaea HOM05D000761 ORTHO05D003834 2.7e-06 55.8 47 59.6
arahy.Tifrunner.gnm1.ann1.LSX38T Arachis hypogaea HOM05D000761 ORTHO05D003834 2.7e-06 55.8 47 59.6
ClCG07G008030 Citrullus lanatus HOM05D000761 ORTHO05D003834 2.7e-06 55.8 50 50.0
DCAR_008405 Daucus carota HOM05D000761 ORTHO05D003834 2.7e-06 55.8 52 51.9
Lj2A188T37 Lonicera japonica HOM05D000761 ORTHO05D003834 2.7e-06 55.8 53 64.2
VMungo0251G0318 Vigna mungo HOM05D000761 ORTHO05D003834 2.7e-06 55.8 50 60.0
Gohir.D08G199400 Gossypium hirsutum HOM05D000761 ORTHO05D003834 3.5e-06 55.5 49 59.2
Gorai.004G210200 Gossypium raimondii HOM05D000761 ORTHO05D003834 3.5e-06 55.5 49 59.2
Sc01g0009460 Simmondsia chinensis HOM05D000761 ORTHO05D003834 3.5e-06 55.5 160 30.0
arahy.Tifrunner.gnm1.ann1.I232SR Arachis hypogaea HOM05D000761 ORTHO05D003834 4.6e-06 55.1 49 55.1
Gohir.A09G192800 Gossypium hirsutum HOM05D000761 ORTHO05D003834 4.6e-06 55.1 49 57.1
Gohir.D09G187000 Gossypium hirsutum HOM05D000761 ORTHO05D003834 4.6e-06 55.1 49 57.1
Gorai.006G209800 Gossypium raimondii HOM05D000761 ORTHO05D003834 4.6e-06 55.1 49 57.1
PGR031G3444 Punica granatum HOM05D000761 ORTHO05D003834 4.6e-06 55.1 43 60.5
Sabra01G0080600 Salix brachista HOM05D000761 ORTHO05D003834 4.6e-06 55.1 46 60.9
Sed0021064 Sechium edule HOM05D000761 ORTHO05D003834 4.6e-06 55.1 50 54.0
TAR375G0100 Trochodendron aralioides HOM05D000761 ORTHO05D003834 4.6e-06 55.1 49 53.1
arahy.Tifrunner.gnm1.ann1.1V1HM6 Arachis hypogaea HOM05D000761 ORTHO05D003834 6.0e-06 54.7 47 57.4
EL10Ac5g12780 Beta vulgaris HOM05D000761 ORTHO05D003834 6.0e-06 54.7 48 52.1
Psat7g034600 Pisum sativum HOM05D000761 ORTHO05D003834 6.0e-06 54.7 50 56.0
Sed0019878 Sechium edule HOM05D000761 ORTHO05D003834 7.8e-06 54.3 64 46.9


User provided reference genes

Program Settings