Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr4.2845 Acer truncatum HOM05D000802 ORTHO05D026245 8.0e-202 707.2 453 100.0
Ciclev10004171m.g Citrus clementina HOM05D000802 ORTHO05D001074 2.0e-51 207.6 380 43.2
TWI09G0527 Tripterygium wilfordii HOM05D000802 ORTHO05D001074 3.3e-22 110.5 395 31.4
Potri.010G014300 Populus trichocarpa HOM05D000802 ORTHO05D001074 9.1e-20 102.4 239 39.7
Thecc.04G285000 Theobroma cacao HOM05D000802 ORTHO05D001074 7.7e-19 99.4 395 32.2
Sabra10G0009200 Salix brachista HOM05D000802 ORTHO05D001074 1.3e-18 98.6 261 38.7
MD16G1168600 Malus domestica HOM05D000802 ORTHO05D013563 3.6e-16 90.5 150 47.3
Dinv44379 Davidia involucrata HOM05D000802 ORTHO05D001074 2.0e-14 84.7 483 26.5
QL06p008959 Quercus lobata HOM05D000802 ORTHO05D001074 2.6e-14 84.3 238 32.8
Manes.03G195500 Manihot esculenta HOM05D000802 ORTHO05D001074 2.9e-10 70.9 240 31.2
TAR633G2247 Trochodendron aralioides HOM05D000802 ORTHO05D026245 3.8e-10 70.5 132 46.2
Prupe.1G136400 Prunus persica HOM05D009893 ORTHO05D013563 6.5e-10 69.7 392 25.8
Potri.008G225000 Populus trichocarpa HOM05D000802 ORTHO05D001074 1.5e-09 68.6 281 31.0
RcHm_v2.0_Chr4g0422301 Rosa chinensis HOM05D009893 ORTHO05D013563 7.2e-09 66.2 247 30.0
Manes.15G012200 Manihot esculenta HOM05D000802 ORTHO05D001074 2.1e-08 64.7 380 25.5
Nn4g25835 Nelumbo nucifera HOM05D000802 ORTHO05D026245 2.1e-08 64.7 321 28.3
TAR362G0539 Trochodendron aralioides HOM05D000802 ORTHO05D001074 2.1e-08 64.7 297 29.6
Gorai.006G262600 Gossypium raimondii HOM05D000802 ORTHO05D001074 4.7e-08 63.5 235 33.2
Gohir.D09G239800 Gossypium hirsutum HOM05D000802 ORTHO05D001074 6.1e-08 63.2 235 32.8
GSVIVG01017736001 Vitis vinifera HOM05D000802 ORTHO05D001074 3.9e-07 60.5 380 28.9
CSS0022063 Camellia sinensis var. sinensis HOM05D000802 ORTHO05D001074 8.8e-07 59.3 374 28.1
Duzib151G1005 Durio zibethinus HOM05D000802 ORTHO05D001074 1.1e-06 58.9 251 33.9
PGSC0003DMG400006301 Solanum tuberosum HOM05D000802 ORTHO05D001074 1.1e-06 58.9 428 27.8
Gohir.A09G238900 Gossypium hirsutum HOM05D000802 ORTHO05D001074 2.0e-06 58.2 406 28.3
FAN12G3029 Fragaria x ananassa HOM05D009893 ORTHO05D013563 3.3e-06 57.4 282 30.9
COL.COLO4_13867 Corchorus olitorius HOM05D000802 ORTHO05D001074 9.7e-06 55.8 293 27.6
FAN12G0512 Fragaria x ananassa HOM05D009893 ORTHO05D013563 9.7e-06 55.8 145 34.5


User provided reference genes

Program Settings