Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr4.2828 Acer truncatum HOM05D006719 ORTHO05D007063 1.9e-43 179.5 145 100.0
Duzib212G0625 Durio zibethinus HOM05D006719 ORTHO05D007063 1.0e-25 120.6 145 75.9
Ciclev10006148m.g Citrus clementina HOM05D006719 ORTHO05D007063 1.3e-25 120.2 148 74.3
COL.COLO4_13881 Corchorus olitorius HOM05D006719 ORTHO05D007063 3.0e-25 119.0 148 78.4
Thecc.04G284000 Theobroma cacao HOM05D006719 ORTHO05D007063 1.5e-24 116.7 148 77.7
Duzib151G0940 Durio zibethinus HOM05D006719 ORTHO05D007063 7.4e-24 114.4 148 71.6
Potri.010G024600 Populus trichocarpa HOM05D006719 ORTHO05D007063 6.9e-22 107.8 150 72.0
Cfa015380 Carpinus fangiana HOM05D006719 ORTHO05D007063 4.5e-21 105.1 150 46.0
Gorai.006G263400 Gossypium raimondii HOM05D006719 ORTHO05D007063 1.7e-20 103.2 149 67.1
Manes.03G194500 Manihot esculenta HOM05D006719 ORTHO05D007063 2.2e-20 102.8 148 73.6
CSS0008404 Camellia sinensis var. sinensis HOM05D006719 ORTHO05D007063 6.5e-20 101.3 148 67.6
CSS0019267 Camellia sinensis var. sinensis HOM05D006719 ORTHO05D007063 6.5e-20 101.3 148 67.6
Gorai.011G189600 Gossypium raimondii HOM05D006719 ORTHO05D007063 1.1e-19 100.5 143 75.5
Gohir.A10G163700 Gossypium hirsutum HOM05D006719 ORTHO05D007063 1.4e-19 100.1 143 74.8
Cpa.g.sc16.165 Carica papaya HOM05D006719 ORTHO05D007063 1.9e-19 99.8 145 74.5
Manes.15G012900 Manihot esculenta HOM05D006719 ORTHO05D007063 3.2e-19 99.0 150 74.7
Gohir.D10G170100 Gossypium hirsutum HOM05D006719 ORTHO05D007063 4.2e-19 98.6 143 74.1
Duzib052G0445 Durio zibethinus HOM05D006719 ORTHO05D007063 9.3e-19 97.4 148 74.3
vmacro08144 Vaccinium macrocarpon HOM05D006719 ORTHO05D007063 1.2e-18 97.1 148 69.6
vmacro22972 Vaccinium macrocarpon HOM05D006719 ORTHO05D007063 1.2e-18 97.1 148 69.6
Potri.008G207500 Populus trichocarpa HOM05D006719 ORTHO05D007063 1.6e-18 96.7 138 67.4
GSVIVG01017752001 Vitis vinifera HOM05D006719 ORTHO05D007063 7.9e-18 94.4 154 70.8
Dinv44385 Davidia involucrata HOM05D006719 ORTHO05D007063 6.7e-17 91.3 151 67.5
Gohir.D09G240400 Gossypium hirsutum HOM05D006719 ORTHO05D007063 8.7e-17 90.9 57 80.7
Gohir.A09G239500 Gossypium hirsutum HOM05D006719 ORTHO05D007063 1.5e-16 90.1 57 80.7
CiPaw.02G083300 Carya illinoinensis HOM05D006719 ORTHO05D007063 1.9e-16 89.7 127 75.6
Actinidia40259 Actinidia chinensis HOM05D006719 ORTHO05D007063 2.5e-16 89.4 139 72.7
MD13G1169300 Malus domestica HOM05D006719 ORTHO05D007063 9.7e-16 87.4 144 66.0
Hma1.2p1_2670F.1_g326650 Hydrangea macrophylla HOM05D006719 ORTHO05D007063 2.2e-15 86.3 141 67.4
Carub.0007s2587 Capsella rubella HOM05D006719 ORTHO05D007063 1.1e-14 84.0 148 69.6
CiPaw.01G149100 Carya illinoinensis HOM05D006719 ORTHO05D007063 1.4e-14 83.6 152 41.4
QL06p008791 Quercus lobata HOM05D006719 ORTHO05D007063 1.4e-14 83.6 136 74.3
MD16G1170500 Malus domestica HOM05D006719 ORTHO05D007063 1.8e-14 83.2 141 68.8
HanXRQChr08g0227651 Helianthus annuus HOM05D006719 ORTHO05D007063 5.3e-14 81.6 127 71.7
ECA233G1326 Erigeron canadensis HOM05D006719 ORTHO05D007063 6.9e-14 81.3 105 80.0
Prupe.1G137900 Prunus persica HOM05D006719 ORTHO05D007063 6.9e-14 81.3 143 62.9
DCAR_030531 Daucus carota HOM05D006719 ORTHO05D007063 1.2e-13 80.5 141 56.7
Dinv29768 Davidia involucrata HOM05D001303 ORTHO05D001129 1.2e-13 80.5 127 70.9
Oeu037752.1 Olea europaea HOM05D006719 ORTHO05D007063 2.0e-13 79.7 146 69.2
PSO170G6252 Papaver somniferum HOM05D006719 ORTHO05D007063 1.3e-12 77.0 140 65.7
PSO210G7501 Papaver somniferum HOM05D006719 ORTHO05D007063 1.3e-12 77.0 140 68.6
Lj6g0006694 Lotus japonicus HOM05D006719 ORTHO05D007063 2.9e-12 75.9 151 68.9
TAR362G0876 Trochodendron aralioides HOM05D006719 ORTHO05D007063 2.9e-12 75.9 124 71.0
VMungo1309G0351 Vigna mungo HOM05D006719 ORTHO05D007063 3.8e-12 75.5 152 59.9
Peaxi162Scf00534g00017 Petunia axillaris HOM05D006719 ORTHO05D007063 6.5e-12 74.7 150 38.7
BraA08t33189Z Brassica rapa HOM05D006719 ORTHO05D007063 1.9e-11 73.2 145 63.4
TWI09G1121 Tripterygium wilfordii HOM05D006719 ORTHO05D007063 2.5e-11 72.8 151 66.2
CANSAT78G1100 Cannabis sativa HOM05D006719 ORTHO05D007063 5.5e-11 71.6 54 70.4
TWI53G1176 Tripterygium wilfordii HOM05D006719 ORTHO05D007063 5.5e-11 71.6 151 68.2
MSTRG.21797 Avicennia marina HOM05D006719 ORTHO05D007063 7.2e-11 71.2 133 58.6
Thhalv10026485m.g Eutrema salsugineum HOM05D006719 ORTHO05D007063 7.2e-11 71.2 153 65.4
Sp7g14160 Schrenkiella parvula HOM05D006719 ORTHO05D007063 7.2e-11 71.2 151 67.5
Nn4g25876 Nelumbo nucifera HOM05D006719 ORTHO05D007063 9.4e-11 70.9 131 59.5
Peaxi162Scf00024g00041 Petunia axillaris HOM05D006719 ORTHO05D007063 9.4e-11 70.9 143 62.9
THA.LOC104821772 Tarenaya hassleriana HOM05D006719 ORTHO05D007063 9.4e-11 70.9 145 55.2
TAR365G1095 Trochodendron aralioides HOM05D006719 ORTHO05D007063 9.4e-11 70.9 140 66.4
Ca_01942_v3 Cicer arietinum L. HOM05D006719 ORTHO05D007063 2.1e-10 69.7 131 71.0
AL7G39510 Arabidopsis lyrata HOM05D006719 ORTHO05D007063 2.7e-10 69.3 142 69.0
Sopen01g028510 Solanum pennellii HOM05D006719 ORTHO05D007063 2.7e-10 69.3 150 67.3
THA.LOC104820261 Tarenaya hassleriana HOM05D006719 ORTHO05D007063 2.7e-10 69.3 144 66.7
MELO3C006659.2 Cucumis melo HOM05D006719 ORTHO05D007063 3.6e-10 68.9 49 75.5
CsaV3_3G014580 Cucumis sativus L. HOM05D006719 ORTHO05D007063 3.6e-10 68.9 49 75.5
Sabra10G0014400 Salix brachista HOM05D006719 ORTHO05D007063 4.6e-10 68.6 178 37.1
FAN12G0931 Fragaria x ananassa HOM05D006719 ORTHO05D007063 6.1e-10 68.2 126 68.3
BcaC07g37932 Brassica carinata HOM05D006719 ORTHO05D007063 7.9e-10 67.8 128 38.3
BolC8t48317H Brassica oleracea HOM05D006719 ORTHO05D007063 1.0e-09 67.4 127 38.6
Nn3g21430 Nelumbo nucifera HOM05D006719 ORTHO05D007063 1.0e-09 67.4 146 61.6
Psat1g153440 Pisum sativum HOM05D006719 ORTHO05D007063 1.4e-09 67.0 117 70.9
Solyc01g066900.4 Solanum lycopersicum HOM05D006719 ORTHO05D007063 1.4e-09 67.0 150 64.0
A08p11980 Brassica napus HOM05D006719 ORTHO05D007063 1.8e-09 66.6 57 63.2
Peaxi162Scf00024g00231 Petunia axillaris HOM05D006719 ORTHO05D007063 2.3e-09 66.2 131 65.6
Aa31LG10G6320 Aethionema arabicum HOM05D006719 ORTHO05D007063 3.0e-09 65.9 142 65.5
Phvul.009G247500 Phaseolus vulgaris HOM05D006719 ORTHO05D007063 3.0e-09 65.9 145 63.4
Actinidia01465 Actinidia chinensis HOM05D006719 ORTHO05D007063 3.9e-09 65.5 65 60.0
RcHm_v2.0_Chr4g0422101 Rosa chinensis HOM05D006719 ORTHO05D007063 5.1e-09 65.1 130 63.8
MBI19_g20884_MAGBIO Magnolia biondii HOM05D006719 ORTHO05D007063 6.7e-09 64.7 161 59.0
SGA_v2.0_scaffold147G36286 Striga asiatica HOM05D006719 ORTHO05D007063 6.7e-09 64.7 57 64.9
Aqoxy2G03000 Aquilegia oxysepala HOM05D000520 ORTHO05D000399 8.8e-09 64.3 151 58.3
FvH4_4g17930 Fragaria vesca HOM05D006719 ORTHO05D007063 1.1e-08 63.9 126 66.7
Lalb_Chr15g0083521 Lupinus albus HOM05D006719 ORTHO05D007063 1.1e-08 63.9 149 64.4
Sed0000550 Sechium edule HOM05D006719 ORTHO05D007063 1.1e-08 63.9 143 63.6
CARHR290290 Cardamine hirsuta HOM05D006719 ORTHO05D007063 2.0e-08 63.2 129 71.3
ClCG05G006040 Citrullus lanatus HOM05D006719 ORTHO05D007063 3.3e-08 62.4 144 67.4
MBI19_g42338_MAGBIO Magnolia biondii HOM05D006719 ORTHO05D007063 3.3e-08 62.4 178 48.9
SalBow2G1281 Salvia bowleyana HOM05D006719 ORTHO05D007063 3.3e-08 62.4 57 57.9
FAN17G0015 Fragaria x ananassa HOM05D006719 ORTHO05D007063 4.3e-08 62.0 149 34.2
Sed0003703 Sechium edule HOM05D006719 ORTHO05D007063 5.7e-08 61.6 145 65.5
Migut.G00270 Erythranthe guttata HOM05D006719 ORTHO05D007063 7.4e-08 61.2 92 72.8
FAN12G0915 Fragaria x ananassa HOM05D006719 ORTHO05D007063 7.4e-08 61.2 99 77.8
FAN07G2874 Fragaria x ananassa HOM05D006719 ORTHO05D007063 1.7e-07 60.1 127 37.8
Glyma.15G147300 Glycine max HOM05D006719 ORTHO05D007063 1.4e-06 57.0 131 65.6
Lsat_1_v5_gn_6_15060 Lactuca sativa HOM05D006719 ORTHO05D007063 1.8e-06 56.6 118 70.3
Medtr2g436860 Medicago truncatula HOM05D006719 ORTHO05D007063 2.4e-06 56.2 48 64.6
AUR62040366 Chenopodium quinoa HOM05D006719 ORTHO05D007063 3.1e-06 55.8 40 75.0
PGSC0003DMG400011322 Solanum tuberosum HOM05D006719 ORTHO05D007063 3.1e-06 55.8 148 63.5
Eucgr.B01308 Eucalyptus grandis HOM05D006719 ORTHO05D007063 5.3e-06 55.1 137 62.8
TPR.G425 Trifolium pratense HOM05D006719 ORTHO05D007063 5.3e-06 55.1 117 69.2
Hund20562 Selenicereus undatus HOM05D006719 ORTHO05D007063 6.9e-06 54.7 117 56.4


User provided reference genes

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