Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr4.2827 Acer truncatum HOM05D006081 ORTHO05D007628 8.0e-103 377.1 189 100.0
Cfa015373 Carpinus fangiana HOM05D006081 ORTHO05D007628 7.8e-66 254.2 192 67.2
Ciclev10005978m.g Citrus clementina HOM05D006081 ORTHO05D007628 7.8e-66 254.2 184 71.7
CiPaw.01G149700 Carya illinoinensis HOM05D006081 ORTHO05D007628 6.2e-63 244.6 191 66.5
QL06p008580 Quercus lobata HOM05D006081 ORTHO05D007628 1.1e-62 243.8 190 68.9
CiPaw.02G083900 Carya illinoinensis HOM05D006081 ORTHO05D007628 1.5e-61 240.0 189 66.7
vmacro08134 Vaccinium macrocarpon HOM05D006081 ORTHO05D007628 4.4e-61 238.4 185 68.1
Manes.15G013500 Manihot esculenta HOM05D006081 ORTHO05D007628 7.5e-61 237.7 183 67.8
Manes.03G194000 Manihot esculenta HOM05D006081 ORTHO05D007628 1.7e-60 236.5 183 67.8
Cpa.g.sc16.161 Carica papaya HOM05D006081 ORTHO05D007628 4.9e-60 235.0 187 64.7
Potri.008G210100 Populus trichocarpa HOM05D006081 ORTHO05D007628 4.9e-60 235.0 180 67.2
Phvul.009G246800 Phaseolus vulgaris HOM05D006081 ORTHO05D007628 6.4e-60 234.6 190 66.8
Thecc.04G283000 Theobroma cacao HOM05D006081 ORTHO05D007628 8.3e-60 234.2 181 66.3
CSS0030149 Camellia sinensis var. sinensis HOM05D006081 ORTHO05D007628 1.9e-59 233.0 184 65.2
Rhsim04G0220300 Rhododendron simsii HOM05D006081 ORTHO05D007628 1.9e-59 233.0 193 65.3
Lalb_Chr18g0051761 Lupinus albus HOM05D006081 ORTHO05D007628 2.4e-59 232.6 182 64.8
Duzib151G0152 Durio zibethinus HOM05D006081 ORTHO05D007628 5.4e-59 231.5 182 67.0
TAR636G3617 Trochodendron aralioides HOM05D006081 ORTHO05D007628 5.4e-59 231.5 183 66.7
Glyma.15G153100 Glycine max HOM05D006081 ORTHO05D007628 7.0e-59 231.1 190 65.8
Dinv29771 Davidia involucrata HOM05D006081 ORTHO05D007628 9.2e-59 230.7 183 65.6
Actinidia40266 Actinidia chinensis HOM05D006081 ORTHO05D007628 1.2e-58 230.3 183 66.7
Medtr2g436940 Medicago truncatula HOM05D006081 ORTHO05D007628 2.7e-58 229.2 187 66.8
TWI53G0242 Tripterygium wilfordii HOM05D006081 ORTHO05D007628 2.7e-58 229.2 179 65.9
VMungo1309G0529 Vigna mungo HOM05D006081 ORTHO05D007628 3.5e-58 228.8 190 65.3
Lj6g0000146 Lotus japonicus HOM05D006081 ORTHO05D007628 6.0e-58 228.0 185 66.5
GSVIVG01017744001 Vitis vinifera HOM05D006081 ORTHO05D007628 7.8e-58 227.6 186 61.8
Gohir.D02G054100 Gossypium hirsutum HOM05D006081 ORTHO05D007628 1.0e-57 227.3 181 64.1
Gorai.005G059600 Gossypium raimondii HOM05D006081 ORTHO05D007628 1.0e-57 227.3 181 64.1
Sabra08G0154300 Salix brachista HOM05D006081 ORTHO05D007628 1.7e-57 226.5 180 65.6
Prupe.1G138200 Prunus persica HOM05D006081 ORTHO05D007628 3.9e-57 225.3 192 63.0
Glyma.09G045900 Glycine max HOM05D006081 ORTHO05D007628 1.1e-56 223.8 190 64.7
Eucgr.H03897 Eucalyptus grandis HOM05D006081 ORTHO05D007628 1.9e-56 223.0 193 60.6
Gohir.A02G048800 Gossypium hirsutum HOM05D006081 ORTHO05D007628 3.3e-56 222.2 181 64.6
TAR365G0221 Trochodendron aralioides HOM05D006081 ORTHO05D007628 7.3e-56 221.1 172 66.9
MD16G1171400 Malus domestica HOM05D006081 ORTHO05D007628 9.5e-56 220.7 186 63.4
PGR031G1107 Punica granatum HOM05D006081 ORTHO05D007628 1.2e-55 220.3 181 62.4
Ca_01966_v3 Cicer arietinum L. HOM05D006081 ORTHO05D007628 1.6e-55 219.9 185 65.9
MSTRG.21799 Avicennia marina HOM05D006081 ORTHO05D007628 2.8e-55 219.2 182 61.0
ClCG06G005230 Citrullus lanatus HOM05D006081 ORTHO05D007628 8.1e-55 217.6 188 62.8
Psat1g153280 Pisum sativum HOM05D006081 ORTHO05D007628 1.4e-54 216.9 185 63.8
Nitab4.5_0003972g0010 Nicotiana tabacum HOM05D006081 ORTHO05D007628 2.3e-54 216.1 182 62.1
Oeu027733.1 Olea europaea HOM05D006081 ORTHO05D007628 2.3e-54 216.1 188 60.6
FvH4_4g17860 Fragaria vesca HOM05D006081 ORTHO05D007628 3.1e-54 215.7 188 61.2
FAN07G2255 Fragaria x ananassa HOM05D006081 ORTHO05D007628 4.0e-54 215.3 188 61.2
arahy.Tifrunner.gnm1.ann1.EZB5Q6 Arachis hypogaea HOM05D006081 ORTHO05D007628 5.2e-54 214.9 182 62.6
arahy.Tifrunner.gnm1.ann1.TA2ZSY Arachis hypogaea HOM05D006081 ORTHO05D007628 8.9e-54 214.2 182 63.2
MELO3C021343.2 Cucumis melo HOM05D006081 ORTHO05D007628 1.2e-53 213.8 197 58.9
CsaV3_6G017270 Cucumis sativus L. HOM05D006081 ORTHO05D007628 1.2e-53 213.8 194 59.3
Lalb_Chr20g0114491 Lupinus albus HOM05D006081 ORTHO05D007628 1.2e-53 213.8 181 61.3
Nitab4.5_0003749g0060 Nicotiana tabacum HOM05D006081 ORTHO05D007628 1.2e-53 213.8 182 62.1
FAN12G2613 Fragaria x ananassa HOM05D006081 ORTHO05D007628 1.5e-53 213.4 188 60.6
FAN17G1774 Fragaria x ananassa HOM05D006081 ORTHO05D007628 5.8e-53 211.5 187 60.4
HanXRQChr03g0079991 Helianthus annuus HOM05D006081 ORTHO05D007628 9.9e-53 210.7 181 61.9
CANSAT78G1428 Cannabis sativa HOM05D006081 ORTHO05D007628 1.7e-52 209.9 187 62.0
Cc00_g10580 Coffea canephora HOM05D006081 ORTHO05D007628 1.7e-52 209.9 182 59.3
Lsat_1_v5_gn_5_49301 Lactuca sativa HOM05D006081 ORTHO05D007628 1.7e-52 209.9 184 60.9
Sopen01g028790 Solanum pennellii HOM05D006081 ORTHO05D007628 1.7e-52 209.9 185 58.4
Solyc01g067080.3 Solanum lycopersicum HOM05D006081 ORTHO05D007628 2.9e-52 209.1 186 58.6
RcHm_v2.0_Chr4g0421971 Rosa chinensis HOM05D006081 ORTHO05D007628 3.7e-52 208.8 187 60.4
PGSC0003DMG400022662 Solanum tuberosum HOM05D006081 ORTHO05D007628 3.7e-52 208.8 189 58.2
ECA240G0281 Erigeron canadensis HOM05D006081 ORTHO05D007628 8.3e-52 207.6 184 62.0
SGA_v2.0_scaffold55G19699 Striga asiatica HOM05D006081 ORTHO05D007628 8.3e-52 207.6 192 58.9
Peaxi162Scf00534g00212 Petunia axillaris HOM05D006081 ORTHO05D007628 1.1e-51 207.2 185 58.4
Aa31LG8G8110 Aethionema arabicum HOM05D006081 ORTHO05D007628 7.1e-51 204.5 183 62.3
Thhalv10021583m.g Eutrema salsugineum HOM05D006081 ORTHO05D007628 7.1e-51 204.5 181 62.4
Sed0014998 Sechium edule HOM05D006081 ORTHO05D007628 9.2e-51 204.1 188 60.1
CARHR097370 Cardamine hirsuta HOM05D006081 ORTHO05D007628 1.2e-50 203.8 185 61.1
C03p51690 Brassica napus HOM05D006081 ORTHO05D007628 1.6e-50 203.4 183 59.0
AT3G21400 Arabidopsis thaliana HOM05D006081 ORTHO05D007628 2.1e-50 203.0 182 61.5
MBI19_g30830_MAGBIO Magnolia biondii HOM05D006081 ORTHO05D007628 2.1e-50 203.0 190 55.8
AL3G35480 Arabidopsis lyrata HOM05D006081 ORTHO05D007628 2.7e-50 202.6 183 62.3
BcaC01g03506 Brassica carinata HOM05D006081 ORTHO05D007628 3.5e-50 202.2 181 59.1
BolC3t17454H Brassica oleracea HOM05D006081 ORTHO05D007628 3.5e-50 202.2 181 59.1
PSO170G3586 Papaver somniferum HOM05D006081 ORTHO05D007628 6.0e-50 201.4 193 54.9
SalBow5G1281 Salvia bowleyana HOM05D006081 ORTHO05D007628 7.8e-50 201.1 183 56.3
Sp3g19430 Schrenkiella parvula HOM05D006081 ORTHO05D007628 7.8e-50 201.1 181 60.2
PSO210G2816 Papaver somniferum HOM05D006081 ORTHO05D007628 3.9e-49 198.7 193 54.4
THA.LOC104820251 Tarenaya hassleriana HOM05D006081 ORTHO05D007628 3.9e-49 198.7 181 59.1
A03p42230 Brassica napus HOM05D006081 ORTHO05D007628 1.1e-48 197.2 181 58.6
BraA03t13376Z Brassica rapa HOM05D006081 ORTHO05D007628 1.1e-48 197.2 181 58.6
BcaB04g19166 Brassica carinata HOM05D006081 ORTHO05D007628 1.9e-48 196.4 179 58.1
Migut.N00097 Erythranthe guttata HOM05D006081 ORTHO05D007628 1.9e-48 196.4 181 55.2
TPR.G26808 Trifolium pratense HOM05D006081 ORTHO05D007628 2.5e-48 196.1 123 76.4
Carub.0003s2143 Capsella rubella HOM05D006081 ORTHO05D007628 4.3e-48 195.3 186 59.1
DCAR_030534 Daucus carota HOM05D006081 ORTHO05D007628 1.2e-47 193.7 188 53.2
Lj6A673G88 Lonicera japonica HOM05D006081 ORTHO05D007628 1.2e-47 193.7 130 70.8
Sc13g0003510 Simmondsia chinensis HOM05D006081 ORTHO05D007628 1.2e-47 193.7 195 51.8
Oeu023291.2 Olea europaea HOM05D006081 ORTHO05D007628 6.2e-47 191.4 230 49.1
unitig_26.g10542 Utricularia gibba HOM05D006081 ORTHO05D007628 7.6e-45 184.5 191 51.3
BcaB06g26235 Brassica carinata HOM05D006081 ORTHO05D007628 1.1e-43 180.6 181 57.5
BcaC05g28170 Brassica carinata HOM05D006081 ORTHO05D007628 1.9e-43 179.9 177 55.9
C05p42070 Brassica napus HOM05D006081 ORTHO05D007628 1.9e-43 179.9 177 55.9
BolC5t32937H Brassica oleracea HOM05D006081 ORTHO05D007628 1.9e-43 179.9 177 55.9
CSS0018730 Camellia sinensis var. sinensis HOM05D006081 ORTHO05D007628 7.1e-43 177.9 115 71.3
CDE02G2676 Ceratophyllum demersum HOM05D006081 ORTHO05D000739 1.2e-42 177.2 187 52.9
AUR62043167 Chenopodium quinoa HOM05D006081 ORTHO05D007628 2.7e-42 176.0 129 61.2
Aqoxy2G03026 Aquilegia oxysepala HOM05D006081 ORTHO05D007628 1.7e-41 173.3 125 68.0
FAN12G2474 Fragaria x ananassa HOM05D006081 ORTHO05D007628 1.1e-40 170.6 108 73.1
AUR62036825 Chenopodium quinoa HOM05D006081 ORTHO05D007628 5.6e-40 168.3 160 51.2
CDE09G1305 Ceratophyllum demersum HOM05D006081 ORTHO05D007628 9.6e-40 167.5 183 52.5
EL10Ac3g06586 Beta vulgaris HOM05D006081 ORTHO05D007628 8.1e-39 164.5 186 47.3
BraA05t21612Z Brassica rapa HOM05D006081 ORTHO05D007628 8.1e-39 164.5 166 55.4
A05p27230 Brassica napus HOM05D006081 ORTHO05D007628 1.8e-38 163.3 170 54.1
CAN.G556.12 Capsicum annuum HOM05D006081 ORTHO05D007628 9.0e-38 161.0 107 71.0
ATR0706G092 Amborella trichopoda HOM05D006081 ORTHO05D007628 3.8e-36 155.6 126 63.5
Os12g0540700 Oryza sativa ssp. japonica HOM05D006081 ORTHO05D007628 3.9e-33 145.6 120 55.0
SEGI_25455 Sequoiadendron giganteum HOM05D006081 ORTHO05D007628 1.9e-32 143.3 181 45.9
TAR365G0700 Trochodendron aralioides HOM05D006081 ORTHO05D007628 2.4e-30 136.3 88 72.7
Actinidia01470 Actinidia chinensis HOM05D006081 ORTHO05D007628 1.2e-29 134.0 183 45.9
MD13G1169900 Malus domestica HOM05D006081 ORTHO05D007628 1.2e-29 134.0 131 59.5
MBI19_g12810_MAGBIO Magnolia biondii HOM05D006081 ORTHO05D007628 2.0e-29 133.3 100 63.0
Zm00001eb410420 Zea mays HOM05D006081 ORTHO05D007628 4.5e-29 132.1 184 41.8
Haze_01224 Corylus avellana HOM05D006081 ORTHO05D007628 5.8e-29 131.7 77 79.2
HPP92_001321 Vanilla planifolia HOM05D006081 ORTHO05D007628 1.7e-28 130.2 183 42.1
AUR62038616 Chenopodium quinoa HOM05D006081 ORTHO05D007628 3.5e-26 122.5 88 61.4
Potri.010G024000 Populus trichocarpa HOM05D006081 ORTHO05D007628 1.1e-22 110.9 64 79.7
CSS0011440 Camellia sinensis var. sinensis HOM05D006081 ORTHO05D007628 4.0e-22 109.0 112 53.6
Haze_01225 Corylus avellana HOM05D006081 ORTHO05D007628 1.4e-19 100.5 99 58.6
Mapoly0041s0011 Marchantia polymorpha HOM05D006081 ORTHO05D007628 8.7e-17 91.3 179 34.6
Pp3c1_29830 Physcomitrium patens HOM05D006081 ORTHO05D007628 1.1e-16 90.9 114 41.2
AagrBONN_evm.TU.Sc2ySwM_368.2309 Anthoceros agrestis HOM05D006081 ORTHO05D007628 2.5e-16 89.7 172 33.1
CBR_g29894 Chara braunii HOM05D008095 ORTHO05D010826 1.5e-13 80.5 114 36.0
Nn5g30060 Nelumbo nucifera HOM05D006081 ORTHO05D007628 2.0e-13 80.1 102 52.0
FAN22G0279 Fragaria x ananassa HOM05D006081 ORTHO05D007628 2.2e-12 76.6 98 50.0
BolC7t43135H Brassica oleracea HOM05D006081 ORTHO05D033520 4.3e-08 62.4 45 62.2
arahy.Tifrunner.gnm1.ann1.LB6QPX Arachis hypogaea HOM05D006081 ORTHO05D007628 1.3e-07 60.8 43 65.1
Hma1.2p1_1676F.1_g297010 Hydrangea macrophylla HOM05D006081 ORTHO05D007628 3.1e-06 56.2 42 57.1


User provided reference genes

Program Settings