Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr4.2765 Acer truncatum HOM05D008610 ORTHO05D010832 1.4e-57 226.1 117 100.0
Duzib151G0343 Durio zibethinus HOM05D008610 ORTHO05D010832 1.5e-19 99.8 97 58.8
Thecc.04G278400 Theobroma cacao HOM05D008610 ORTHO05D010832 9.8e-19 97.1 97 55.7
COL.COLO4_13922 Corchorus olitorius HOM05D008610 ORTHO05D010832 1.2e-13 80.1 102 52.0
QL06p007560 Quercus lobata HOM05D008610 ORTHO05D010832 2.1e-13 79.3 97 47.4
CSS0018848 Camellia sinensis var. sinensis HOM05D008610 ORTHO05D010832 4.4e-11 71.6 98 42.9
TWI09G0412 Tripterygium wilfordii HOM05D008610 ORTHO05D010832 5.8e-11 71.2 97 45.4
Glyma.07G251100 Glycine max HOM05D008610 ORTHO05D010832 1.1e-09 67.0 92 44.6
TPR.G28783 Trifolium pratense HOM05D008610 ORTHO05D010832 1.4e-09 66.6 92 41.3
Ca_21546_v3 Cicer arietinum L. HOM05D008610 ORTHO05D010832 2.4e-09 65.9 89 44.9
Glyma.17G023200 Glycine max HOM05D008610 ORTHO05D010832 2.4e-09 65.9 95 43.2
Lj4g0020809 Lotus japonicus HOM05D008610 ORTHO05D010832 2.4e-09 65.9 95 46.3
Nn4g26013 Nelumbo nucifera HOM05D008610 ORTHO05D010832 3.2e-09 65.5 97 42.3
Phvul.003G101300 Phaseolus vulgaris HOM05D008610 ORTHO05D010832 3.2e-09 65.5 97 42.3
CANSAT78G1094 Cannabis sativa HOM05D008610 ORTHO05D010832 5.4e-09 64.7 107 38.3
VMungo1215G1271 Vigna mungo HOM05D008610 ORTHO05D010832 5.4e-09 64.7 99 43.4
Dinv44421 Davidia involucrata HOM05D008610 ORTHO05D010832 7.1e-09 64.3 99 44.4
Actinidia23424 Actinidia chinensis HOM05D008610 ORTHO05D010832 9.2e-09 63.9 89 42.7
Rhsim02G0012900 Rhododendron simsii HOM05D008610 ORTHO05D010832 9.2e-09 63.9 89 43.8
TAR362G0442 Trochodendron aralioides HOM05D008610 ORTHO05D010832 1.2e-08 63.5 99 43.4
DCAR_027105 Daucus carota HOM05D008610 ORTHO05D010832 1.3e-07 60.1 95 35.8
Sed0011065 Sechium edule HOM05D008610 ORTHO05D010832 3.9e-07 58.5 96 36.5
Psat4g226320 Pisum sativum HOM05D008610 ORTHO05D010832 5.1e-07 58.2 92 41.3
Hma1.2p1_0823F.1_g224690 Hydrangea macrophylla HOM05D008610 ORTHO05D010832 8.6e-07 57.4 98 40.8
Medtr4g118830 Medicago truncatula HOM05D008610 ORTHO05D010832 8.6e-07 57.4 102 40.2
arahy.Tifrunner.gnm1.ann1.L0EE17 Arachis hypogaea HOM05D008610 ORTHO05D010832 1.1e-06 57.0 98 39.8
Sopen01g029220 Solanum pennellii HOM05D008610 ORTHO05D010832 1.5e-06 56.6 99 40.4
CAN.G556.6 Capsicum annuum HOM05D008610 ORTHO05D010832 1.9e-06 56.2 99 36.4
Peaxi162Scf00386g00922 Petunia axillaris HOM05D008610 ORTHO05D010832 1.9e-06 56.2 100 38.0
Solyc01g067340.3 Solanum lycopersicum HOM05D008610 ORTHO05D010832 2.5e-06 55.8 99 39.4
arahy.Tifrunner.gnm1.ann1.2NND9M Arachis hypogaea HOM05D008610 ORTHO05D010832 3.3e-06 55.5 98 38.8
ClCG05G005840 Citrullus lanatus HOM05D008610 ORTHO05D010832 4.3e-06 55.1 101 38.6


User provided reference genes

Program Settings