Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr4.2738 Acer truncatum HOM05D006941 ORTHO05D008361 5.1e-34 147.1 72 100.0
Oeu010965.1 Olea europaea HOM05D006941 ORTHO05D008361 1.4e-28 129.0 72 84.7
FvH4_4g16990 Fragaria vesca HOM05D006941 ORTHO05D008361 1.9e-28 128.6 72 86.1
FAN07G2315 Fragaria x ananassa HOM05D006941 ORTHO05D008361 1.9e-28 128.6 72 86.1
FAN12G1403 Fragaria x ananassa HOM05D006941 ORTHO05D008361 1.9e-28 128.6 72 86.1
FAN12G3786 Fragaria x ananassa HOM05D006941 ORTHO05D008361 1.9e-28 128.6 72 86.1
Gorai.005G056700 Gossypium raimondii HOM05D006941 ORTHO05D008361 7.1e-28 126.7 72 83.3
TWI09G0325 Tripterygium wilfordii HOM05D006941 ORTHO05D008361 9.3e-28 126.3 72 83.3
CANSAT78G0092 Cannabis sativa HOM05D006941 ORTHO05D008361 2.1e-27 125.2 72 83.3
Gohir.A02G045400 Gossypium hirsutum HOM05D006941 ORTHO05D008361 2.1e-27 125.2 72 81.9
Gohir.D02G051400 Gossypium hirsutum HOM05D006941 ORTHO05D008361 2.1e-27 125.2 72 81.9
CiPaw.02G087700 Carya illinoinensis HOM05D006941 ORTHO05D008361 2.7e-27 124.8 72 81.9
TWI53G0190 Tripterygium wilfordii HOM05D006941 ORTHO05D008361 2.7e-27 124.8 71 83.1
FAN22G2172 Fragaria x ananassa HOM05D006941 ORTHO05D008361 3.5e-27 124.4 72 84.7
FAN17G2868 Fragaria x ananassa HOM05D006941 ORTHO05D008361 4.6e-27 124.0 72 83.3
Oeu029280.1 Olea europaea HOM05D006941 ORTHO05D008361 4.6e-27 124.0 72 83.3
Thecc.04G275300 Theobroma cacao HOM05D006941 ORTHO05D008361 4.6e-27 124.0 72 79.2
Manes.03G190000 Manihot esculenta HOM05D006941 ORTHO05D008361 6.0e-27 123.6 72 80.6
PGR004G2827 Punica granatum HOM05D006941 ORTHO05D008361 7.9e-27 123.2 72 81.9
RcHm_v2.0_Chr4g0420661 Rosa chinensis HOM05D006941 ORTHO05D008361 1.0e-26 122.9 72 83.3
EL10As5g23584 Beta vulgaris HOM05D006941 ORTHO05D008361 1.3e-26 122.5 69 82.6
Manes.14G117300 Manihot esculenta HOM05D006941 ORTHO05D008361 1.3e-26 122.5 72 79.2
Prupe.1G143700 Prunus persica HOM05D006941 ORTHO05D008361 1.3e-26 122.5 72 79.2
Nitab4.5_0001624g0050 Nicotiana tabacum HOM05D006941 ORTHO05D008361 8.7e-26 119.8 72 79.2
Solyc01g067820.3 Solanum lycopersicum HOM05D006941 ORTHO05D008361 8.7e-26 119.8 72 79.2
PGSC0003DMG400022846 Solanum tuberosum HOM05D006941 ORTHO05D008361 8.7e-26 119.8 72 79.2
CSS0029112 Camellia sinensis var. sinensis HOM05D006941 ORTHO05D008361 1.1e-25 119.4 72 76.4
Sp5g00970 Schrenkiella parvula HOM05D006941 ORTHO05D008361 1.1e-25 119.4 69 81.2
Duzib151G0434 Durio zibethinus HOM05D006941 ORTHO05D008361 1.5e-25 119.0 70 78.6
Thhalv10006352m.g Eutrema salsugineum HOM05D006941 ORTHO05D008361 1.9e-25 118.6 69 81.2
Migut.G00223 Erythranthe guttata HOM05D006941 ORTHO05D008361 2.5e-25 118.2 73 78.1
C08p37290 Brassica napus HOM05D006941 ORTHO05D008361 3.3e-25 117.9 69 79.7
BolC8t51307H Brassica oleracea HOM05D006941 ORTHO05D008361 3.3e-25 117.9 69 79.7
Eucgr.H03682 Eucalyptus grandis HOM05D006941 ORTHO05D008361 3.3e-25 117.9 72 79.2
Peaxi162Scf01067g00024 Petunia axillaris HOM05D006941 ORTHO05D008361 3.3e-25 117.9 71 76.1
BcaC07g42761 Brassica carinata HOM05D006941 ORTHO05D008361 4.3e-25 117.5 69 79.7
Carub.0005s2918 Capsella rubella HOM05D006941 ORTHO05D008361 4.3e-25 117.5 69 76.8
Sopen01g029770 Solanum pennellii HOM05D006941 ORTHO05D008361 4.3e-25 117.5 72 76.4
CARHR172790 Cardamine hirsuta HOM05D006941 ORTHO05D008361 5.7e-25 117.1 70 74.3
THA.LOC104820449 Tarenaya hassleriana HOM05D006941 ORTHO05D008361 5.7e-25 117.1 71 78.9
Ca_09608_v3 Cicer arietinum L. HOM05D006941 ORTHO05D008361 7.4e-25 116.7 71 80.3
Eucgr.H03704 Eucalyptus grandis HOM05D006941 ORTHO05D008361 9.6e-25 116.3 72 77.8
Lalb_Chr14g0364951 Lupinus albus HOM05D006941 ORTHO05D008361 9.6e-25 116.3 72 79.2
Phvul.007G158300 Phaseolus vulgaris HOM05D006941 ORTHO05D008361 1.3e-24 115.9 72 80.6
SalBow1G8344 Salvia bowleyana HOM05D006941 ORTHO05D008361 1.3e-24 115.9 72 76.4
Actinidia32379 Actinidia chinensis HOM05D006941 ORTHO05D008361 1.6e-24 115.5 69 76.8
Glyma.10G044600 Glycine max HOM05D006941 ORTHO05D008361 1.6e-24 115.5 72 77.8
Glyma.13G132200 Glycine max HOM05D006941 ORTHO05D008361 1.6e-24 115.5 72 77.8
Rhsim02G0014500 Rhododendron simsii HOM05D006941 ORTHO05D008361 1.6e-24 115.5 72 76.4
A09p54410 Brassica napus HOM05D006941 ORTHO05D008361 3.7e-24 114.4 69 78.3
BraA09t40854Z Brassica rapa HOM05D006941 ORTHO05D008361 3.7e-24 114.4 69 78.3
Lalb_Chr22g0358511 Lupinus albus HOM05D006941 ORTHO05D008361 4.8e-24 114.0 72 77.8
Phvul.010G109000 Phaseolus vulgaris HOM05D006941 ORTHO05D008361 4.8e-24 114.0 72 76.4
Phvul.L002281 Phaseolus vulgaris HOM05D006941 ORTHO05D008361 4.8e-24 114.0 72 76.4
Psat6g067840 Pisum sativum HOM05D006941 ORTHO05D008361 4.8e-24 114.0 71 77.5
Potri.005G071700 Populus trichocarpa HOM05D006941 ORTHO05D008361 4.8e-24 114.0 72 73.6
CAN.G1327.4 Capsicum annuum HOM05D006941 ORTHO05D008361 6.2e-24 113.6 72 73.6
HanXRQChr05g0154771 Helianthus annuus HOM05D006941 ORTHO05D008361 6.2e-24 113.6 72 76.4
Os11g0107450 Oryza sativa ssp. japonica HOM05D006941 ORTHO05D008361 6.2e-24 113.6 66 77.3
QL06p006942 Quercus lobata HOM05D006941 ORTHO05D008361 6.2e-24 113.6 71 71.8
Lj5g0014316 Lotus japonicus HOM05D006941 ORTHO05D008361 8.2e-24 113.2 72 76.4
Aa31LG10G16360 Aethionema arabicum HOM05D006941 ORTHO05D008361 1.1e-23 112.8 64 78.1
AT3G62450 Arabidopsis thaliana HOM05D006941 ORTHO05D008361 1.1e-23 112.8 69 73.9
vmacro15274 Vaccinium macrocarpon HOM05D006941 ORTHO05D008361 1.1e-23 112.8 75 74.7
ECA233G1626 Erigeron canadensis HOM05D006941 ORTHO05D008361 1.4e-23 112.5 72 75.0
AL5G45260 Arabidopsis lyrata HOM05D006941 ORTHO05D008361 1.8e-23 112.1 69 73.9
Os12g0106550 Oryza sativa ssp. japonica HOM05D006941 ORTHO05D008361 2.4e-23 111.7 66 75.8
unitig_22.g6332 Utricularia gibba HOM05D006941 ORTHO05D008361 2.4e-23 111.7 66 74.2
PSO302G0016 Papaver somniferum HOM05D006941 ORTHO05D008361 2.0e-22 108.6 67 76.1
DCAR_030574 Daucus carota HOM05D006941 ORTHO05D008361 2.6e-22 108.2 72 72.2
Medtr1g068580 Medicago truncatula HOM05D006941 ORTHO05D008361 2.6e-22 108.2 63 81.0
Sed0004518 Sechium edule HOM05D006941 ORTHO05D008361 5.8e-22 107.1 73 75.3
Sabra07G0080600 Salix brachista HOM05D006941 ORTHO05D008361 7.6e-22 106.7 82 64.6
Zm00001eb163280 Zea mays HOM05D006941 ORTHO05D008361 1.7e-21 105.5 66 72.7
Medtr2g005070 Medicago truncatula HOM05D006941 ORTHO05D008361 2.9e-21 104.8 62 79.0
BcaB02g07336 Brassica carinata HOM05D006941 ORTHO05D008361 3.8e-21 104.4 59 79.7
Zm00001eb094170 Zea mays HOM05D006941 ORTHO05D008361 6.5e-21 103.6 66 71.2
arahy.Tifrunner.gnm1.ann1.UB09PE Arachis hypogaea HOM05D006941 ORTHO05D008361 1.4e-20 102.4 71 74.6
Hund22020 Selenicereus undatus HOM05D006941 ORTHO05D008361 1.4e-20 102.4 69 72.5
arahy.Tifrunner.gnm1.ann1.DDI179 Arachis hypogaea HOM05D006941 ORTHO05D008361 5.5e-20 100.5 85 64.7
SHI00325 Sapria himalayana HOM05D006941 ORTHO05D008361 5.5e-20 100.5 72 69.4
SGA_v2.0_scaffold57G20266 Striga asiatica HOM05D006941 ORTHO05D008361 1.6e-19 99.0 101 55.4
SEGI_10041 Sequoiadendron giganteum HOM05D006941 ORTHO05D008361 3.5e-19 97.8 64 67.2
Lj4g0022805 Lotus japonicus HOM05D006941 ORTHO05D008361 3.0e-18 94.7 72 70.8
ClCG06G005480 Citrullus lanatus HOM05D006941 ORTHO05D008361 5.1e-18 94.0 81 60.5
CDE02G1545 Ceratophyllum demersum HOM05D006941 ORTHO05D008361 6.7e-18 93.6 62 71.0
RcHm_v2.0_Chr1g0363231 Rosa chinensis HOM05D006941 ORTHO05D008361 1.6e-16 89.0 50 84.0
Haze_01039 Corylus avellana HOM05D006941 ORTHO05D008361 2.8e-16 88.2 72 65.3
MD16G1176900 Malus domestica HOM05D006941 ORTHO05D008361 8.2e-16 86.7 52 80.8
VMungo0464G0431 Vigna mungo HOM05D006941 ORTHO05D008361 1.1e-15 86.3 131 42.7
Atru.chr2.2418 Acer truncatum HOM05D006941 ORTHO05D008361 1.4e-15 85.9 42 97.6
Cfa015511 Carpinus fangiana HOM05D006941 ORTHO05D008361 1.4e-15 85.9 70 64.3
HanXRQChr15g0466771 Helianthus annuus HOM05D006941 ORTHO05D008361 3.1e-15 84.7 137 39.4
PGSC0003DMG400029912 Solanum tuberosum HOM05D006941 ORTHO05D008361 3.1e-15 84.7 51 76.5
Sabra05G0058700 Salix brachista HOM05D006941 ORTHO05D008361 1.2e-11 72.8 166 31.9
BcaC07g40728 Brassica carinata HOM05D006941 ORTHO05D008361 4.6e-11 70.9 69 56.5
Sc19g0004830 Simmondsia chinensis HOM05D006941 ORTHO05D008361 5.1e-10 67.4 42 73.8
vmacro16859 Vaccinium macrocarpon HOM05D000537 ORTHO05D000415 5.1e-10 67.4 39 76.9
Eucgr.H03709 Eucalyptus grandis HOM05D006941 ORTHO05D008361 6.7e-10 67.0 42 76.2
Ciclev10006724m.g Citrus clementina HOM05D006941 ORTHO05D008361 1.1e-09 66.2 42 71.4
MSTRG.24772 Avicennia marina HOM05D006941 ORTHO05D008361 1.5e-09 65.9 42 71.4
Oeu048197.1 Olea europaea HOM05D010625 ORTHO05D008361 2.5e-09 65.1 41 73.2
SGA_v2.0_scaffold114G31931 Striga asiatica HOM05D006941 ORTHO05D008361 2.5e-09 65.1 52 55.8
Dinv16400 Davidia involucrata HOM05D006941 ORTHO05D008361 9.7e-09 63.2 35 77.1
Lsat_1_v5_gn_2_28060 Lactuca sativa HOM05D006941 ORTHO05D008361 9.7e-09 63.2 41 75.6
VMungo0720G2266 Vigna mungo HOM05D006941 ORTHO05D008361 1.3e-08 62.8 42 71.4
COL.COLO4_13955 Corchorus olitorius HOM05D006941 ORTHO05D008361 4.8e-08 60.8 41 70.7
Cpa.g.sc16.95 Carica papaya HOM05D006941 ORTHO05D008361 8.2e-08 60.1 29 93.1
Eucgr.H03675 Eucalyptus grandis HOM05D006941 ORTHO05D008361 1.8e-07 58.9 36 72.2
AagrBONN_evm.TU.Sc2ySwM_344.628 Anthoceros agrestis HOM05D006941 ORTHO05D008361 6.9e-07 57.0 63 44.4
HanXRQChr10g0285751 Helianthus annuus HOM05D006941 ORTHO05D008361 9.1e-07 56.6 31 77.4
Medtr2g048470 Medicago truncatula HOM05D006941 ORTHO05D008361 1.2e-06 56.2 34 76.5
Actinidia00061 Actinidia chinensis HOM05D006941 ORTHO05D008361 2.6e-06 55.1 30 80.0
Pp3c4_20400 Physcomitrium patens HOM05D006941 ORTHO05D008361 3.4e-06 54.7 71 42.3


User provided reference genes

Program Settings