Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr4.2717 Acer truncatum HOM05D007734 ORTHO05D009807 5.8e-43 177.2 90 100.0
Ciclev10007097m.g Citrus clementina HOM05D007734 ORTHO05D009807 1.9e-30 135.6 91 76.9
CiPaw.02G088300 Carya illinoinensis HOM05D007734 ORTHO05D009807 4.7e-29 131.0 89 75.3
Duzib151G0459 Durio zibethinus HOM05D007734 ORTHO05D009807 3.1e-28 128.3 87 74.7
ClCG06G005560 Citrullus lanatus HOM05D007734 ORTHO05D009807 8.9e-28 126.7 89 75.3
CsaV3_6G005600 Cucumis sativus L. HOM05D007734 ORTHO05D009807 8.9e-28 126.7 89 71.9
FvH4_4g16860 Fragaria vesca HOM05D007734 ORTHO05D009807 8.9e-28 126.7 88 67.0
FAN07G1074 Fragaria x ananassa HOM05D007734 ORTHO05D009807 8.9e-28 126.7 88 68.2
FAN12G0936 Fragaria x ananassa HOM05D007734 ORTHO05D009807 8.9e-28 126.7 88 67.0
FAN12G2573 Fragaria x ananassa HOM05D007734 ORTHO05D009807 8.9e-28 126.7 88 67.0
QL06p006592 Quercus lobata HOM05D007734 ORTHO05D009807 1.2e-27 126.3 85 72.9
MELO3C021378.2 Cucumis melo HOM05D007734 ORTHO05D009807 1.5e-27 125.9 89 74.2
Gohir.D10G164200 Gossypium hirsutum HOM05D007734 ORTHO05D009807 2.0e-27 125.6 86 68.6
Gorai.011G183300 Gossypium raimondii HOM05D007734 ORTHO05D009807 2.0e-27 125.6 86 68.6
CiPaw.01G155700 Carya illinoinensis HOM05D007734 ORTHO05D009807 2.6e-27 125.2 86 69.8
FAN17G2648 Fragaria x ananassa HOM05D007734 ORTHO05D009807 2.6e-27 125.2 88 67.0
Sed0016523 Sechium edule HOM05D007734 ORTHO05D009807 3.4e-27 124.8 89 74.2
TWI73G0877 Tripterygium wilfordii HOM05D007734 ORTHO05D009807 3.4e-27 124.8 89 68.5
MD13G1176100 Malus domestica HOM05D007734 ORTHO05D009807 5.8e-27 124.0 89 70.8
GSVIVG01017837001 Vitis vinifera HOM05D007734 ORTHO05D009807 9.9e-27 123.2 89 70.8
Manes.03G189200 Manihot esculenta HOM05D007734 ORTHO05D009807 1.3e-26 122.9 88 69.3
RcHm_v2.0_Chr4g0420431 Rosa chinensis HOM05D007734 ORTHO05D009807 1.3e-26 122.9 88 65.9
Gohir.A10G104500 Gossypium hirsutum HOM05D007734 ORTHO05D009807 1.7e-26 122.5 86 67.4
Hma1.2p1_0643F.1_g194590 Hydrangea macrophylla HOM05D007734 ORTHO05D009807 2.2e-26 122.1 84 71.4
MD16G1177900 Malus domestica HOM05D007734 ORTHO05D009807 2.2e-26 122.1 89 68.5
Eucgr.H03661 Eucalyptus grandis HOM05D007734 ORTHO05D009807 2.9e-26 121.7 86 70.9
Thecc.04G274000 Theobroma cacao HOM05D007734 ORTHO05D009807 4.9e-26 120.9 86 69.8
CANSAT78G1562 Cannabis sativa HOM05D007734 ORTHO05D009807 8.3e-26 120.2 70 80.0
Aa31LG11G10850 Aethionema arabicum HOM05D007734 ORTHO05D009807 1.1e-25 119.8 89 65.2
Cfa015520 Carpinus fangiana HOM05D007734 ORTHO05D009807 1.4e-25 119.4 70 78.6
Sp6g25520 Schrenkiella parvula HOM05D007734 ORTHO05D009807 1.4e-25 119.4 92 63.0
TWI09G1295 Tripterygium wilfordii HOM05D007734 ORTHO05D009807 1.4e-25 119.4 86 67.4
Duzib052G0038 Durio zibethinus HOM05D007734 ORTHO05D009807 3.2e-25 118.2 89 66.3
Thhalv10015120m.g Eutrema salsugineum HOM05D007734 ORTHO05D009807 3.2e-25 118.2 89 67.4
Gohir.D09G060100 Gossypium hirsutum HOM05D007734 ORTHO05D009807 3.2e-25 118.2 86 68.6
Prupe.1G145200 Prunus persica HOM05D007734 ORTHO05D009807 3.2e-25 118.2 89 66.3
BraA03t10238Z Brassica rapa HOM05D007734 ORTHO05D009807 5.4e-25 117.5 92 64.1
Haze_01029 Corylus avellana HOM05D007734 ORTHO05D009807 5.4e-25 117.5 70 78.6
AT5G18850 Arabidopsis thaliana HOM05D007734 ORTHO05D009807 7.1e-25 117.1 91 62.6
CARHR194160 Cardamine hirsuta HOM05D007734 ORTHO05D009807 7.1e-25 117.1 89 67.4
Lj4g0025137 Lotus japonicus HOM05D007734 ORTHO05D009807 7.1e-25 117.1 78 69.2
Nn4g26101 Nelumbo nucifera HOM05D007734 ORTHO05D009807 7.1e-25 117.1 89 65.2
BcaB01g05276 Brassica carinata HOM05D007734 ORTHO05D009807 9.2e-25 116.7 92 60.9
BolC3t13544H Brassica oleracea HOM05D007734 ORTHO05D009807 9.2e-25 116.7 92 60.9
Gorai.006G074800 Gossypium raimondii HOM05D007734 ORTHO05D009807 9.2e-25 116.7 86 67.4
C03p10680 Brassica napus HOM05D007734 ORTHO05D009807 1.2e-24 116.3 92 60.9
Carub.0006s1717 Capsella rubella HOM05D007734 ORTHO05D009807 1.2e-24 116.3 92 65.2
Migut.G00233 Erythranthe guttata HOM05D007734 ORTHO05D009807 1.6e-24 115.9 85 68.2
Sed0021110 Sechium edule HOM05D007734 ORTHO05D009807 1.6e-24 115.9 70 77.1
TAR365G0453 Trochodendron aralioides HOM05D007734 ORTHO05D009807 3.5e-24 114.8 89 67.4
AL6G30210 Arabidopsis lyrata HOM05D007734 ORTHO05D009807 4.6e-24 114.4 91 61.5
SGA_v2.0_scaffold142G35667 Striga asiatica HOM05D007734 ORTHO05D009807 4.6e-24 114.4 85 67.1
Glyma.07G252900 Glycine max HOM05D007734 ORTHO05D009807 7.8e-24 113.6 78 66.7
arahy.Tifrunner.gnm1.ann1.80YKV9 Arachis hypogaea HOM05D007734 ORTHO05D009807 1.0e-23 113.2 70 75.7
arahy.Tifrunner.gnm1.ann1.F9B3QK Arachis hypogaea HOM05D007734 ORTHO05D009807 1.0e-23 113.2 70 75.7
Sabra08G0163100 Salix brachista HOM05D007734 ORTHO05D009807 1.0e-23 113.2 80 67.5
Glyma.17G021500 Glycine max HOM05D007734 ORTHO05D009807 1.7e-23 112.5 70 71.4
Gohir.A09G061200 Gossypium hirsutum HOM05D007734 ORTHO05D009807 1.7e-23 112.5 86 65.1
Peaxi162Scf00095g00125 Petunia axillaris HOM05D007734 ORTHO05D009807 1.7e-23 112.5 84 64.3
BcaB01g04888 Brassica carinata HOM05D007734 ORTHO05D009807 3.0e-23 111.7 92 58.7
Oeu044804.1 Olea europaea HOM05D007734 ORTHO05D009807 3.9e-23 111.3 85 64.7
PSO302G0168 Papaver somniferum HOM05D007734 ORTHO05D009807 3.9e-23 111.3 90 61.1
Potri.010G026900 Populus trichocarpa HOM05D007734 ORTHO05D009807 3.9e-23 111.3 71 76.1
Potri.008G197300 Populus trichocarpa HOM05D007734 ORTHO05D009807 6.6e-23 110.5 73 72.6
Phvul.003G099200 Phaseolus vulgaris HOM05D007734 ORTHO05D009807 1.9e-22 109.0 70 70.0
Dinv44448 Davidia involucrata HOM05D007734 ORTHO05D009807 2.5e-22 108.6 70 75.7
CDE05G0384 Ceratophyllum demersum HOM05D007734 ORTHO05D009807 7.3e-22 107.1 85 61.2
Cc03_g02610 Coffea canephora HOM05D007734 ORTHO05D009807 2.8e-21 105.1 85 63.5
CAN.G627.13 Capsicum annuum HOM05D007734 ORTHO05D009807 4.7e-21 104.4 86 60.5
MBI19_g13511_MAGBIO Magnolia biondii HOM05D007734 ORTHO05D009807 4.7e-21 104.4 89 56.2
Actinidia40206 Actinidia chinensis HOM05D007734 ORTHO05D009807 2.4e-20 102.1 84 61.9
CSS0028590 Camellia sinensis var. sinensis HOM05D007734 ORTHO05D009807 2.4e-20 102.1 90 63.3
Nitab4.5_0009396g0030 Nicotiana tabacum HOM05D007734 ORTHO05D009807 2.4e-20 102.1 73 67.1
PGSC0003DMG400032093 Solanum tuberosum HOM05D007734 ORTHO05D009807 2.4e-20 102.1 66 69.7
Solyc01g080590.3 Solanum lycopersicum HOM05D007734 ORTHO05D009807 4.0e-20 101.3 66 69.7
Sopen01g032410 Solanum pennellii HOM05D007734 ORTHO05D009807 5.2e-20 100.9 66 69.7
THA.LOC104818832 Tarenaya hassleriana HOM05D002550 ORTHO05D003420 2.0e-19 99.0 79 63.3
Ca_30429_v3 Cicer arietinum L. HOM05D007734 ORTHO05D009807 3.4e-19 98.2 69 66.7
CDE05G0036 Ceratophyllum demersum HOM05D007734 ORTHO05D009807 7.6e-19 97.1 64 70.3
ATR0487G018 Amborella trichopoda HOM05D007734 ORTHO05D009807 1.7e-18 95.9 86 50.0
Lalb_Chr07g0177521 Lupinus albus HOM05D007734 ORTHO05D009807 2.2e-18 95.5 67 62.7
MSTRG.3964 Avicennia marina HOM05D007734 ORTHO05D009807 3.8e-18 94.7 99 53.5
Psat4g030040 Pisum sativum HOM05D007734 ORTHO05D009807 7.1e-17 90.5 63 65.1
Aqoxy5G00589 Aquilegia oxysepala HOM05D007734 ORTHO05D009807 5.1e-15 84.3 77 57.1
SEGI_32711 Sequoiadendron giganteum HOM05D007734 ORTHO05D009807 8.7e-15 83.6 80 47.5
Sc13g0003750 Simmondsia chinensis HOM05D007734 ORTHO05D009807 1.6e-13 79.3 48 79.2
FAN22G2010 Fragaria x ananassa HOM05D007734 ORTHO05D001690 1.2e-11 73.2 47 68.1
A03p09150 Brassica napus HOM05D007734 ORTHO05D009807 1.3e-10 69.7 51 58.8
Nitab4.5_0000059g0330 Nicotiana tabacum HOM05D007734 ORTHO05D009807 4.9e-10 67.8 56 58.9
Actinidia00065 Actinidia chinensis HOM05D007734 ORTHO05D009807 2.7e-08 62.0 67 47.8
BcaB08g36639 Brassica carinata HOM05D007734 ORTHO05D009807 6.0e-08 60.8 41 63.4
A10p20780 Brassica napus HOM05D007734 ORTHO05D009807 7.3e-06 53.9 46 52.2


User provided reference genes

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